RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 IL17RBQ9NRM6 502 aa16.35■□□□□ 0.21
CSNK1D-219ENST00000581660 CACNA1BQ00975 2339 aa16.35■□□□□ 0.21
CSNK1D-219ENST00000581660 RSPH10B2B2RC85 870 aa16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 PATL2C9JE40 543 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 SLC3A2P08195 630 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 RSPH10BP0C881 870 aa16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 HOXD8P13378 290 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 VCPP55072 806 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 MFSD10Q14728 455 aa16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 KIAA0753Q2KHM9 967 aa16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 TTBK2Q6IQ55 1244 aa16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 SERINC5Q86VE9 423 aa16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 KBTBD3Q8NAB2 608 aa16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 RGS22Q8NE09 1264 aa16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 ATOH1Q92858 354 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 ASIC4Q96FT7 647 aa16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■■■■□ 21.8
CSNK1D-219ENST00000581660 WDR19Q8NEZ3 1342 aa16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 VPS13AQ96RL7 3174 aa16.34■□□□□ 0.21
CSNK1D-219ENST00000581660 EPG5Q9HCE0 2579 aa16.33■□□□□ 0.21
CSNK1D-219ENST00000581660 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 GRM6O15303 877 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 RNF113AO15541 343 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 HMMRO75330 724 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 APPP05067 770 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 CTNNB1P35222 781 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 SLC16A2P36021 539 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 ADAM15Q13444 863 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 HIC1Q14526 733 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 LY6KQ17RY6 165 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 CCDC96Q2M329 555 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 SIRT2Q8IXJ6 389 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 SEPT8Q92599 483 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 ALG1Q9BT22 464 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 NACAP1Q9BZK3 213 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 MAF1Q9H063 256 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 RWDD3Q9Y3V2 267 aa16.33■□□□□ 0.2
CSNK1D-219ENST00000581660 M0R2C6 588 aa16.32■□□□□ 0.2
CSNK1D-219ENST00000581660 NMT2O60551 498 aa16.32■□□□□ 0.2
CSNK1D-219ENST00000581660 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-219ENST00000581660 AVPR2P30518 371 aa16.32■□□□□ 0.2
CSNK1D-219ENST00000581660 BMPR1AP36894 532 aa16.32■□□□□ 0.2
CSNK1D-219ENST00000581660 ZNF200P98182 395 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-219ENST00000581660 PPARAQ07869 468 aa16.32■□□□□ 0.2
CSNK1D-219ENST00000581660 KIAA1217Q5T5P2 1943 aa16.32■□□□□ 0.2
CSNK1D-219ENST00000581660 SMRP1Q8NCR6 262 aa16.32■□□□□ 0.2
CSNK1D-219ENST00000581660 PPTC7Q8NI37 304 aa16.32■□□□□ 0.2
CSNK1D-219ENST00000581660 FSD1Q9BTV5 496 aa16.32■□□□□ 0.2
CSNK1D-219ENST00000581660 IFIH1Q9BYX4 1025 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-219ENST00000581660 ZNF292O60281 2723 aa16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 LINC01565O15544 149 aa16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 MMP1P03956 469 aa16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 ZNF286BP0CG31 522 aa16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 GTF2F1P35269 517 aaKnown RBP eCLIP16.31■□□□□ 0.21e-7■■■■■ 38.7
CSNK1D-219ENST00000581660 THPOP40225 353 aa16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 COASYQ13057 564 aa16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 ASCL5Q7RTU5 278 aa16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 FIBCD1Q8N539 461 aa16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 CLP1Q92989 425 aaKnown RBP16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 IL17RAQ96F46 866 aa16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 BCL11AQ9H165 835 aa16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 RC3H2Q9HBD1 1191 aaKnown RBP16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 DDX41Q9UJV9 622 aaKnown RBP16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 WDR87Q6ZQQ6 2873 aa16.31■□□□□ 0.2
CSNK1D-219ENST00000581660 PRR23AA6NEV1 266 aa16.3■□□□□ 0.2
CSNK1D-219ENST00000581660 TSPY2A6NKD2 308 aa16.3■□□□□ 0.2
CSNK1D-219ENST00000581660 CAND2O75155 1236 aa16.3■□□□□ 0.2
CSNK1D-219ENST00000581660 UPP2O95045 317 aa16.3■□□□□ 0.2
CSNK1D-219ENST00000581660 HOXC8P31273 242 aa16.3■□□□□ 0.2
CSNK1D-219ENST00000581660 LAMC2Q13753 1193 aa16.3■□□□□ 0.2
CSNK1D-219ENST00000581660 SEPT14Q6ZU15 432 aa16.3■□□□□ 0.2
CSNK1D-219ENST00000581660 CLEC1BQ9P126 229 aa16.3■□□□□ 0.2
CSNK1D-219ENST00000581660 CCER2I3L3R5 266 aa16.29■□□□□ 0.2
CSNK1D-219ENST00000581660 NBL1P41271 181 aa16.29■□□□□ 0.2
CSNK1D-219ENST00000581660 NDUFV1P49821 464 aa16.29■□□□□ 0.2
CSNK1D-219ENST00000581660 CAMK1Q14012 370 aa16.29■□□□□ 0.2
CSNK1D-219ENST00000581660 DHX37Q8IY37 1157 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-219ENST00000581660 EFHBQ8N7U6 833 aa16.29■□□□□ 0.2
CSNK1D-219ENST00000581660 APBB2Q92870 758 aa16.29■□□□□ 0.2
CSNK1D-219ENST00000581660 IWS1Q96ST2 819 aa16.29■□□□□ 0.2
CSNK1D-219ENST00000581660 NAPBQ9H115 298 aa16.29■□□□□ 0.2
CSNK1D-219ENST00000581660 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
CSNK1D-219ENST00000581660 MTMR7Q9Y216 660 aa16.29■□□□□ 0.2
CSNK1D-219ENST00000581660 ADGRA3Q8IWK6 1321 aa16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 H0Y858 1186 aa16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 PPFIA4O75335 1185 aa16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 ICAM3P32942 547 aa16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 RRP1P56182 461 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 STXBP2Q15833 593 aa16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 NSUN6Q8TEA1 469 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 PPP2R3CQ969Q6 453 aa16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 PHF7Q9BWX1 381 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 PLVAPQ9BX97 442 aa16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 IGFLR1Q9H665 355 aa16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 TLR9Q9NR96 1032 aa16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 NCOR2Q9Y618 2525 aa16.28■□□□□ 0.2
CSNK1D-219ENST00000581660 FRMPD2Q68DX3 1309 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-219ENST00000581660 SYTL5Q8TDW5 730 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms