RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 HFE2Q6ZVN8 426 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 DHX37Q8IY37 1157 aaKnown RBP14.93□□□□□ -0.02
SS18-219ENST00000581570 TMEM192Q8IY95 271 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 PPTC7Q8NI37 304 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 EMID1Q96A84 441 aaPredicted RBP14.93□□□□□ -0.02
SS18-219ENST00000581570 SNX27Q96L92 541 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 MFSD14AQ96MC6 490 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 TTC14Q96N46 770 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 YME1L1Q96TA2 773 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 RMDN3Q96TC7 470 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 UBA5Q9GZZ9 404 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 NSUN3Q9H649 340 aaKnown RBP14.93□□□□□ -0.02
SS18-219ENST00000581570 CLDND1Q9NY35 253 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 COL20A1Q9P218 1284 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 EIF3JO75822 258 aaKnown RBP14.92□□□□□ -0.02
SS18-219ENST00000581570 GOLGA8HP0CJ92 632 aa14.92□□□□□ -0.02
SS18-219ENST00000581570 IRS1P35568 1242 aa14.92□□□□□ -0.02
SS18-219ENST00000581570 HIC1Q14526 733 aa14.92□□□□□ -0.02
SS18-219ENST00000581570 COL19A1Q14993 1142 aa14.92□□□□□ -0.02
SS18-219ENST00000581570 PLEKHG4Q58EX7 1191 aa14.92□□□□□ -0.02
SS18-219ENST00000581570 GPATCH4Q5T3I0 446 aaKnown RBP14.92□□□□□ -0.02
SS18-219ENST00000581570 ARHGEF16Q5VV41 709 aa14.92□□□□□ -0.02
SS18-219ENST00000581570 FBXO11Q86XK2 927 aa14.92□□□□□ -0.02
SS18-219ENST00000581570 ANKS1AQ92625 1134 aa14.92□□□□□ -0.02
SS18-219ENST00000581570 MRVI1Q9Y6F6 885 aa14.92□□□□□ -0.02
SS18-219ENST00000581570 SIP14410 1827 aa14.92□□□□□ -0.02
SS18-219ENST00000581570 ABCB11O95342 1321 aa14.92□□□□□ -0.02
SS18-219ENST00000581570 NCK2O43639 380 aa14.91□□□□□ -0.02
SS18-219ENST00000581570 PPFIA4O75335 1185 aa14.91□□□□□ -0.02
SS18-219ENST00000581570 UPP2O95045 317 aa14.91□□□□□ -0.02
SS18-219ENST00000581570 FGAP02671 866 aa14.91□□□□□ -0.02
SS18-219ENST00000581570 C20orf194Q5TEA3 1177 aa14.91□□□□□ -0.02
SS18-219ENST00000581570 MCF2L2Q86YR7 1114 aa14.91□□□□□ -0.02
SS18-219ENST00000581570 OTUD7AQ8TE49 926 aaPredicted RBP14.91□□□□□ -0.02
SS18-219ENST00000581570 SEPT8Q92599 483 aa14.91□□□□□ -0.02
SS18-219ENST00000581570 TOP1MTQ969P6 601 aa14.91□□□□□ -0.02
SS18-219ENST00000581570 CPVLQ9H3G5 476 aa14.91□□□□□ -0.02
SS18-219ENST00000581570 NR3C2P08235 984 aa14.9□□□□□ -0.02
SS18-219ENST00000581570 EIF2AK2P19525 551 aaKnown RBP14.9□□□□□ -0.02
SS18-219ENST00000581570 LTBRP36941 435 aa14.9□□□□□ -0.02
SS18-219ENST00000581570 CDC37Q16543 378 aaPredicted RBP14.9□□□□□ -0.02
SS18-219ENST00000581570 RPAINQ86UA6 219 aa14.9□□□□□ -0.02
SS18-219ENST00000581570 SERINC5Q86VE9 423 aa14.9□□□□□ -0.02
SS18-219ENST00000581570 HOXD8P13378 290 aaPredicted RBP14.89□□□□□ -0.03
SS18-219ENST00000581570 SMAD2Q15796 467 aaKnown RBP14.89□□□□□ -0.03
SS18-219ENST00000581570 CLUL1Q15846 466 aa14.89□□□□□ -0.03
SS18-219ENST00000581570 HERC4Q5GLZ8 1057 aaPredicted RBP14.89□□□□□ -0.03
SS18-219ENST00000581570 MIER1Q8N108 512 aa14.89□□□□□ -0.03
SS18-219ENST00000581570 ATP6V0A1Q93050 837 aa14.89□□□□□ -0.03
SS18-219ENST00000581570 SPATA33Q96N06 139 aa14.89□□□□□ -0.03
SS18-219ENST00000581570 POP1Q99575 1024 aaKnown RBP14.89□□□□□ -0.03
SS18-219ENST00000581570 HELLSQ9NRZ9 838 aa14.89□□□□□ -0.03
SS18-219ENST00000581570 MUTYHQ9UIF7 546 aa14.89□□□□□ -0.03
SS18-219ENST00000581570 MRPL11Q9Y3B7 192 aaKnown RBP14.89□□□□□ -0.03
SS18-219ENST00000581570 C17orf102A2RUQ5 167 aa14.88□□□□□ -0.03
SS18-219ENST00000581570 SORBS3O60504 671 aa14.88□□□□□ -0.03
SS18-219ENST00000581570 HSPD1P10809 573 aaKnown RBP14.88□□□□□ -0.03
SS18-219ENST00000581570 HAND2P61296 217 aa14.88□□□□□ -0.03
SS18-219ENST00000581570 CTC1Q2NKJ3 1217 aa14.88□□□□□ -0.03
SS18-219ENST00000581570 HSDL1Q3SXM5 330 aa14.88□□□□□ -0.03
SS18-219ENST00000581570 CELF3Q5SZQ8 465 aaKnown RBP14.88□□□□□ -0.03
SS18-219ENST00000581570 MYSM1Q5VVJ2 828 aa14.88□□□□□ -0.03
SS18-219ENST00000581570 MFSD6Q6ZSS7 791 aa14.88□□□□□ -0.03
SS18-219ENST00000581570 RNF135Q8IUD6 432 aa14.88□□□□□ -0.03
SS18-219ENST00000581570 ADGRF4Q8IZF3 695 aa14.88□□□□□ -0.03
SS18-219ENST00000581570 PHOX2BQ99453 314 aa14.88□□□□□ -0.03
SS18-219ENST00000581570 IFIH1Q9BYX4 1025 aaKnown RBP14.88□□□□□ -0.03
SS18-219ENST00000581570 PXMP2Q9NR77 195 aa14.88□□□□□ -0.03
SS18-219ENST00000581570 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.87□□□□□ -0.03
SS18-219ENST00000581570 MBTPS2O43462 519 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 RB1P06400 928 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 MX1P20591 662 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 CTNNB1P35222 781 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 DLX2Q07687 328 aaPredicted RBP14.87□□□□□ -0.03
SS18-219ENST00000581570 HYAL1Q12794 435 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 KCNV1Q6PIU1 500 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 DGKHQ86XP1 1220 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 FIBCD1Q8N539 461 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 EDAQ92838 391 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 IL17RAQ96F46 866 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 ZKSCAN3Q9BRR0 538 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 C16orf70Q9BSU1 422 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 OSBPL7Q9BZF2 842 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 LMAN2LQ9H0V9 348 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 RCAN3Q9UKA8 241 aa14.87□□□□□ -0.03
SS18-219ENST00000581570 C5orf67F2Z3F1 127 aa14.86□□□□□ -0.03
SS18-219ENST00000581570 TREHO43280 583 aa14.86□□□□□ -0.03
SS18-219ENST00000581570 GGPS1O95749 300 aa14.86□□□□□ -0.03
SS18-219ENST00000581570 CFBP00751 764 aa14.86□□□□□ -0.03
SS18-219ENST00000581570 CTSHP09668 335 aa14.86□□□□□ -0.03
SS18-219ENST00000581570 PCP11498 1178 aaKnown RBP14.86□□□□□ -0.03
SS18-219ENST00000581570 MYCLP12524 364 aaPredicted RBP14.86□□□□□ -0.03
SS18-219ENST00000581570 QRICH1Q2TAL8 776 aa14.86□□□□□ -0.03
SS18-219ENST00000581570 MCMDC2Q4G0Z9 681 aa14.86□□□□□ -0.03
SS18-219ENST00000581570 PRSS33Q8NF86 280 aa14.86□□□□□ -0.03
SS18-219ENST00000581570 EVI5LQ96CN4 794 aa14.86□□□□□ -0.03
SS18-219ENST00000581570 IGFLR1Q9H665 355 aa14.86□□□□□ -0.03
SS18-219ENST00000581570 VAT1LQ9HCJ6 419 aa14.86□□□□□ -0.03
SS18-219ENST00000581570 H3BRB1 525 aa14.85□□□□□ -0.03
SS18-219ENST00000581570 STXBP3O00186 592 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms