RNA–Protein interactions for RNA: ENST00000581029.5

GAPLINC-203, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-203ENST00000581029 PRR16Q569H4 304 aa10.31□□□□□ -0.76
GAPLINC-203ENST00000581029 HAUS3Q68CZ6 603 aa10.31□□□□□ -0.76
GAPLINC-203ENST00000581029 RDM1Q8NG50 284 aa10.31□□□□□ -0.76
GAPLINC-203ENST00000581029 PGBD1Q96JS3 809 aa10.31□□□□□ -0.76
GAPLINC-203ENST00000581029 SENP7Q9BQF6 1050 aa10.31□□□□□ -0.76
GAPLINC-203ENST00000581029 SDF4Q9BRK5 362 aa10.31□□□□□ -0.76
GAPLINC-203ENST00000581029 VTA1Q9NP79 307 aa10.31□□□□□ -0.76
GAPLINC-203ENST00000581029 KCNMB3Q9NPA1 279 aa10.31□□□□□ -0.76
GAPLINC-203ENST00000581029 COL20A1Q9P218 1284 aa10.31□□□□□ -0.76
GAPLINC-203ENST00000581029 PCDHA7Q9UN72 937 aa10.31□□□□□ -0.76
GAPLINC-203ENST00000581029 SMCHD1A6NHR9 2005 aa10.31□□□□□ -0.76
GAPLINC-203ENST00000581029 UTRNP46939 3433 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 NKRFO15226 690 aaKnown RBP eCLIP10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 FKTNO75072 461 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 TRPA1O75762 1119 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 SFNP31947 248 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 UBA7P41226 1012 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 TTLL4Q14679 1199 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 NFKBIBQ15653 356 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 MORN1Q5T089 497 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 KRT79Q5XKE5 535 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 OLFML2BQ68BL8 750 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 KANK3Q6NY19 840 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 NEK9Q8TD19 979 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 MRPS27Q92552 414 aaKnown RBP10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 CALML4Q96GE6 196 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 INPP4AQ96PE3 977 aaPredicted RBP10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 MTMR9Q96QG7 549 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 APBA2Q99767 749 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 ZNF577Q9BSK1 485 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 TEKT3Q9BXF9 490 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 NT5C3AQ9H0P0 336 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 ABHD16BQ9H3Z7 469 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 TTC12Q9H892 705 aaPredicted RBP10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 ZNFX1Q9P2E3 1918 aaKnown RBP10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 PLXNB2O15031 1838 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 NFASCO94856 1347 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 KDM3AQ9Y4C1 1321 aa10.3□□□□□ -0.76
GAPLINC-203ENST00000581029 IGLV3-22A0A075B6J6 115 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 VWA3AA6NCI4 1184 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 SOWAHBA6NEL2 793 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 FAM86B1E9PN63 330 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 GPR25O00155 361 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 IPO5O00410 1097 aaKnown RBP10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 GAS7O60861 476 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 LETM1O95202 739 aaPredicted RBP10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 TDP2O95551 362 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 FAM86B2P0C5J1 330 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 MARCKSP29966 332 aaPredicted RBP10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 TXKP42681 527 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 PSMC4P43686 418 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 JAK3P52333 1124 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 KRT76Q01546 638 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 LRCH2Q5VUJ6 765 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 SMAP1Q8IYB5 467 aaPredicted RBP10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 C4orf32Q8N8J7 132 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 ETNPPLQ8TBG4 499 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 SCFD2Q8WU76 684 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 SLC5A5Q92911 643 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 CDK5RAP3Q96JB5 506 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 ZIC5Q96T25 663 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 TINF2Q9BSI4 451 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 CCSER1Q9C0I3 900 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 LRRC27Q9C0I9 530 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 CUEDC2Q9H467 287 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 MAGEF1Q9HAY2 307 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 KCNH7Q9NS40 1196 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 LMBRD1Q9NUN5 540 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 DDX19AQ9NUU7 478 aaKnown RBP10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 LRWD1Q9UFC0 647 aa10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 FBXO2Q9UK22 296 aaPredicted RBP10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 DDX49Q9Y6V7 483 aaKnown RBP10.29□□□□□ -0.76
GAPLINC-203ENST00000581029 FAM237AA0A1B0GTK4 181 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 SPATA31C2B4DYI2 1134 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 CTAGE5O15320 804 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 MSH4O15457 936 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 KINO60870 393 aaKnown RBP10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 TAL1P17542 331 aaPredicted RBP10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 MRPS9P82933 396 aaKnown RBP10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 CNTN2Q02246 1040 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 FAM160A1Q05DH4 1040 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 PPP2R5CQ13362 524 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 NBR1Q14596 966 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 KLHL40Q2TBA0 621 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 MFSD14CQ5VZR4 134 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 RESP18Q5W5W9 173 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 IQSEC1Q6DN90 963 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 ZNF746Q6NUN9 644 aaPredicted RBP10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 ARMCX2Q7L311 632 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 ELOA2Q8IYF1 753 aaPredicted RBP10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 IGSF22Q8N9C0 903 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 RASSF8Q8NHQ8 419 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 LENG9Q96B70 501 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 MAML3Q96JK9 1138 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 TIGD1Q96MW7 591 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 AGO4Q9HCK5 861 aaKnown RBP10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 MRVI1Q9Y6F6 885 aa10.28□□□□□ -0.76
GAPLINC-203ENST00000581029 ADAMTS3O15072 1205 aa10.27□□□□□ -0.77
GAPLINC-203ENST00000581029 SLC37A4O43826 429 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms