RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 WDR11Q9BZH6 1224 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 NUP62CLQ9H1M0 184 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 CLSTN2Q9H4D0 955 aa15.62■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ASTN1O14525 1302 aa15.61■□□□□ 0.09
CDK5RAP3-219ENST00000580670 DNAJC25-GNG10A0A024R161 153 aa15.61■□□□□ 0.09
CDK5RAP3-219ENST00000580670 POTEMA6NI47 508 aa15.61■□□□□ 0.09
CDK5RAP3-219ENST00000580670 POLR2DO15514 142 aaKnown RBP15.61■□□□□ 0.09
CDK5RAP3-219ENST00000580670 UBA7P41226 1012 aa15.61■□□□□ 0.09
CDK5RAP3-219ENST00000580670 CAMK4Q16566 473 aa15.61■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ZSCAN23Q3MJ62 389 aa15.61■□□□□ 0.09
CDK5RAP3-219ENST00000580670 PDILTQ8N807 584 aa15.61■□□□□ 0.09
CDK5RAP3-219ENST00000580670 JADE2Q9NQC1 790 aa15.61■□□□□ 0.09
CDK5RAP3-219ENST00000580670 LRWD1Q9UFC0 647 aa15.61■□□□□ 0.09
CDK5RAP3-219ENST00000580670 IVNS1ABPQ9Y6Y0 642 aa15.61■□□□□ 0.09
CDK5RAP3-219ENST00000580670 MAPK4P31152 587 aa15.6■□□□□ 0.09
CDK5RAP3-219ENST00000580670 CRHR2Q13324 411 aa15.6■□□□□ 0.09
CDK5RAP3-219ENST00000580670 MTMR1Q13613 665 aa15.6■□□□□ 0.09
CDK5RAP3-219ENST00000580670 C17orf99Q6UX52 265 aa15.6■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ZNF577Q9BSK1 485 aa15.6■□□□□ 0.09
CDK5RAP3-219ENST00000580670 TNMDQ9H2S6 317 aa15.6■□□□□ 0.09
CDK5RAP3-219ENST00000580670 KCNH7Q9NS40 1196 aa15.6■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ZNFX1Q9P2E3 1918 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-219ENST00000580670 A0A087X0B3 334 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 CA12O43570 354 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 STRNO43815 780 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ALDH1A1P00352 501 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ADORA2AP29274 412 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 STXBP2Q15833 593 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 LRCH2Q5VUJ6 765 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 GPR142Q7Z601 462 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 NLRX1Q86UT6 975 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 CABP7Q86V35 215 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 ABRAQ8N0Z2 381 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 RASSF8Q8NHQ8 419 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 SLC5A5Q92911 643 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 CCSER1Q9C0I3 900 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 PLXNB2O15031 1838 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 B4DLN1 442 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 IPO5O00410 1097 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 GAS7O60861 476 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 STAM2O75886 525 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 PDE4DQ08499 809 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 PLEKHH3Q7Z736 793 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 REM2Q8IYK8 340 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 DHX58Q96C10 678 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 TIGD1Q96MW7 591 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 INPP4AQ96PE3 977 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 MPHOSPH6Q99547 160 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 SDF4Q9BRK5 362 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 AGO4Q9HCK5 861 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 PKD2L1Q9P0L9 805 aa15.59■□□□□ 0.09
CDK5RAP3-219ENST00000580670 EIF3JO75822 258 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 PSMD10O75832 226 aa15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 EDNRBP24530 442 aa15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 SPIRE1Q08AE8 756 aa15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 KARSQ15046 597 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ZRSR1Q15695 479 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 LONRF3Q496Y0 759 aa15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 KRBA2Q6ZNG9 492 aa15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 CNNM3Q8NE01 707 aa15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 GPRASP2Q96D09 838 aa15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 FGD4Q96M96 766 aa15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 PYM1Q9BRP8 204 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 CCDC39Q9UFE4 941 aa15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 VAV3Q9UKW4 847 aa15.58■□□□□ 0.08
CDK5RAP3-219ENST00000580670 SYCE3A1L190 88 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 LETM1O95202 739 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 GRB14Q14449 540 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 GNPTABQ3T906 1256 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 KRT79Q5XKE5 535 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 NCAPH2Q6IBW4 605 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 IQUBQ8NA54 791 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 SNX29Q8TEQ0 813 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 MMTAG2Q9BU76 263 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 TEKT3Q9BXF9 490 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 DISC1Q9NRI5 854 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 SERTAD1Q9UHV2 236 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 CTAGE5O15320 804 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 MAFGO15525 162 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ACTN4O43707 911 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 COBLO75128 1261 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 RGS20O76081 388 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ECM2O94769 699 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 HTRA3P83110 453 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ZNF792Q3KQV3 632 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 RRAGBQ5VZM2 374 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 OTOP1Q7RTM1 612 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 CALML4Q96GE6 196 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 PLIN2Q99541 437 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 RIT2Q99578 217 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 GRPEL1Q9HAV7 217 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 USP25Q9UHP3 1055 aa15.57■□□□□ 0.08
CDK5RAP3-219ENST00000580670 SLC15A5A6NIM6 579 aa15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 SLFN14P0C7P3 912 aa15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 STAT6P42226 847 aa15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 VEGFBP49765 207 aa15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 SEMA3FQ13275 785 aa15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ITGB3BPQ13352 177 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 PPP2R5CQ13362 524 aa15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 E2F4Q16254 413 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms