RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 NAPAP54920 295 aa23.12■■□□□ 1.29
SMG8-204ENST00000580498 AKAP17AQ02040 695 aaKnown RBP23.12■■□□□ 1.29
SMG8-204ENST00000580498 IL31RAQ8NI17 732 aa23.12■■□□□ 1.29
SMG8-204ENST00000580498 FGBP02675 491 aa23.11■■□□□ 1.29
SMG8-204ENST00000580498 UBA1P22314 1058 aaKnown RBP23.11■■□□□ 1.29
SMG8-204ENST00000580498 RFC2P35250 354 aa23.11■■□□□ 1.29
SMG8-204ENST00000580498 CCL23P55773 120 aa23.11■■□□□ 1.29
SMG8-204ENST00000580498 MYSM1Q5VVJ2 828 aa23.11■■□□□ 1.29
SMG8-204ENST00000580498 Q6ZUG5 572 aa23.11■■□□□ 1.29
SMG8-204ENST00000580498 SESTD1Q86VW0 696 aa23.11■■□□□ 1.29
SMG8-204ENST00000580498 KCNB2Q92953 911 aa23.11■■□□□ 1.29
SMG8-204ENST00000580498 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.11■■□□□ 1.29
SMG8-204ENST00000580498 SNX14Q9Y5W7 946 aa23.11■■□□□ 1.29
SMG8-204ENST00000580498 MEIS2O14770 477 aa23.1■■□□□ 1.29
SMG8-204ENST00000580498 ACTN1P12814 892 aa23.1■■□□□ 1.29
SMG8-204ENST00000580498 ICAM3P32942 547 aa23.1■■□□□ 1.29
SMG8-204ENST00000580498 PSEN2P49810 448 aa23.1■■□□□ 1.29
SMG8-204ENST00000580498 MFSD10Q14728 455 aa23.1■■□□□ 1.29
SMG8-204ENST00000580498 PTGISQ16647 500 aa23.1■■□□□ 1.29
SMG8-204ENST00000580498 CAGE1Q8TC20 777 aa23.1■■□□□ 1.29
SMG8-204ENST00000580498 CCDC12Q8WUD4 166 aaPredicted RBP23.1■■□□□ 1.29
SMG8-204ENST00000580498 INPP4AQ96PE3 977 aaPredicted RBP23.1■■□□□ 1.29
SMG8-204ENST00000580498 RTEL1Q9NZ71 1219 aa23.1■■□□□ 1.29
SMG8-204ENST00000580498 CNTNAP5Q8WYK1 1306 aa23.09■■□□□ 1.29
SMG8-204ENST00000580498 TMEM265A0A087WTH1 108 aa23.09■■□□□ 1.29
SMG8-204ENST00000580498 hCG_1642624A0A1W2PR95 340 aa23.09■■□□□ 1.29
SMG8-204ENST00000580498 PITPNM1O00562 1244 aa23.09■■□□□ 1.29
SMG8-204ENST00000580498 FOSP01100 380 aaPredicted RBP23.09■■□□□ 1.29
SMG8-204ENST00000580498 CYP2C9P11712 490 aa23.09■■□□□ 1.29
SMG8-204ENST00000580498 ADCY7P51828 1080 aa23.09■■□□□ 1.29
SMG8-204ENST00000580498 EPHB4P54760 987 aa23.09■■□□□ 1.29
SMG8-204ENST00000580498 TMEM240Q5SV17 173 aa23.09■■□□□ 1.29
SMG8-204ENST00000580498 METTL7BQ6UX53 244 aa23.09■■□□□ 1.29
SMG8-204ENST00000580498 BRF1Q92994 677 aa23.09■■□□□ 1.29
SMG8-204ENST00000580498 ALG1Q9BT22 464 aa23.09■■□□□ 1.29
SMG8-204ENST00000580498 BRPF3Q9ULD4 1205 aa23.09■■□□□ 1.29
SMG8-204ENST00000580498 V9GY48 417 aaPredicted RBP23.09■■□□□ 1.29
SMG8-204ENST00000580498 RGS20O76081 388 aa23.08■■□□□ 1.29
SMG8-204ENST00000580498 PARNO95453 639 aaKnown RBP23.08■■□□□ 1.29
SMG8-204ENST00000580498 F2P00734 622 aa23.08■■□□□ 1.29
SMG8-204ENST00000580498 ACRP10323 421 aa23.08■■□□□ 1.29
SMG8-204ENST00000580498 RPS6KB1P23443 525 aa23.08■■□□□ 1.29
SMG8-204ENST00000580498 KIAA0753Q2KHM9 967 aa23.08■■□□□ 1.29
SMG8-204ENST00000580498 ZNF365Q70YC5 407 aa23.08■■□□□ 1.29
SMG8-204ENST00000580498 GPKOWQ92917 476 aaPredicted RBP eCLIP23.08■■□□□ 1.29
SMG8-204ENST00000580498 GPRASP2Q96D09 838 aa23.08■■□□□ 1.29
SMG8-204ENST00000580498 ZNF215Q9UL58 517 aaPredicted RBP23.08■■□□□ 1.29
SMG8-204ENST00000580498 SPATA31C2B4DYI2 1134 aa23.07■■□□□ 1.28
SMG8-204ENST00000580498 SORBS3O60504 671 aa23.07■■□□□ 1.28
SMG8-204ENST00000580498 ZNF286BP0CG31 522 aa23.07■■□□□ 1.28
SMG8-204ENST00000580498 MRPS9P82933 396 aaKnown RBP23.07■■□□□ 1.28
SMG8-204ENST00000580498 APOBRQ0VD83 1088 aa23.07■■□□□ 1.28
SMG8-204ENST00000580498 COL9A3Q14050 684 aaPredicted RBP23.07■■□□□ 1.28
SMG8-204ENST00000580498 Q7L0L9 218 aa23.07■■□□□ 1.28
SMG8-204ENST00000580498 SENP7Q9BQF6 1050 aa23.07■■□□□ 1.28
SMG8-204ENST00000580498 USP26Q9BXU7 913 aa23.07■■□□□ 1.28
SMG8-204ENST00000580498 MTMR10Q9NXD2 777 aa23.07■■□□□ 1.28
SMG8-204ENST00000580498 PCDHA6Q9UN73 950 aa23.07■■□□□ 1.28
SMG8-204ENST00000580498 PCDHA8Q9Y5H6 950 aa23.07■■□□□ 1.28
SMG8-204ENST00000580498 CYP46A1Q9Y6A2 500 aa23.07■■□□□ 1.28
SMG8-204ENST00000580498 MAFGO15525 162 aa23.06■■□□□ 1.28
SMG8-204ENST00000580498 HSDL1Q3SXM5 330 aa23.06■■□□□ 1.28
SMG8-204ENST00000580498 WWC2Q6AWC2 1192 aa23.06■■□□□ 1.28
SMG8-204ENST00000580498 MCTP2Q6DN12 878 aa23.06■■□□□ 1.28
SMG8-204ENST00000580498 FBXL16Q8N461 479 aa23.06■■□□□ 1.28
SMG8-204ENST00000580498 AFAP1L1Q8TED9 768 aa23.06■■□□□ 1.28
SMG8-204ENST00000580498 HERVK_113Q902F9 699 aa23.06■■□□□ 1.28
SMG8-204ENST00000580498 ZFP91Q96JP5 570 aaPredicted RBP23.06■■□□□ 1.28
SMG8-204ENST00000580498 RIC8AQ9NPQ8 531 aa23.06■■□□□ 1.28
SMG8-204ENST00000580498 GTF2IRD1Q9UHL9 959 aa23.06■■□□□ 1.28
SMG8-204ENST00000580498 MSRAQ9UJ68 235 aa23.06■■□□□ 1.28
SMG8-204ENST00000580498 ZBBXA8MT70 800 aa23.05■■□□□ 1.28
SMG8-204ENST00000580498 GNAT1P11488 350 aa23.05■■□□□ 1.28
SMG8-204ENST00000580498 HOXD8P13378 290 aaPredicted RBP23.05■■□□□ 1.28
SMG8-204ENST00000580498 AP3B2Q13367 1082 aa23.05■■□□□ 1.28
SMG8-204ENST00000580498 MTMR1Q13613 665 aa23.05■■□□□ 1.28
SMG8-204ENST00000580498 UBE2SQ16763 222 aa23.05■■□□□ 1.28
SMG8-204ENST00000580498 CYFIP1Q7L576 1253 aa23.05■■□□□ 1.28
SMG8-204ENST00000580498 KAT2BQ92831 832 aa23.05■■□□□ 1.28
SMG8-204ENST00000580498 FTOQ9C0B1 505 aaKnown RBP eCLIP23.05■■□□□ 1.28
SMG8-204ENST00000580498 WNT8AQ9H1J5 351 aa23.05■■□□□ 1.28
SMG8-204ENST00000580498 BARHL2Q9NY43 387 aa23.05■■□□□ 1.28
SMG8-204ENST00000580498 STXBP5LQ9Y2K9 1186 aa23.05■■□□□ 1.28
SMG8-204ENST00000580498 UMODL1Q5DID0 1318 aa23.05■■□□□ 1.28
SMG8-204ENST00000580498 SMCO2A6NFE2 343 aa23.04■■□□□ 1.28
SMG8-204ENST00000580498 H3BRB1 525 aa23.04■■□□□ 1.28
SMG8-204ENST00000580498 CPA1P15085 419 aa23.04■■□□□ 1.28
SMG8-204ENST00000580498 SP2Q02086 613 aa23.04■■□□□ 1.28
SMG8-204ENST00000580498 RAB30Q15771 203 aa23.04■■□□□ 1.28
SMG8-204ENST00000580498 CPLX2Q6PUV4 134 aaKnown RBP23.04■■□□□ 1.28
SMG8-204ENST00000580498 RUFY3Q7L099 469 aa23.04■■□□□ 1.28
SMG8-204ENST00000580498 SCLYQ96I15 445 aa23.04■■□□□ 1.28
SMG8-204ENST00000580498 TUT1Q9H6E5 874 aaKnown RBP23.04■■□□□ 1.28
SMG8-204ENST00000580498 HDAC6Q9UBN7 1215 aa23.04■■□□□ 1.28
SMG8-204ENST00000580498 SLC4A7Q9Y6M7 1214 aa23.04■■□□□ 1.28
SMG8-204ENST00000580498 SCG2P13521 617 aa23.03■■□□□ 1.28
SMG8-204ENST00000580498 ZNF76P36508 570 aa23.03■■□□□ 1.28
SMG8-204ENST00000580498 PTK7Q13308 1070 aa23.03■■□□□ 1.28
SMG8-204ENST00000580498 GDF6Q6KF10 455 aaPredicted RBP23.03■■□□□ 1.28
SMG8-204ENST00000580498 OTOP2Q7RTS6 562 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms