RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 RTEL1Q9NZ71 1219 aa18.79■□□□□ 0.6
IFT20-210ENST00000580357 GTF3C3Q9Y5Q9 886 aa18.79■□□□□ 0.6
IFT20-210ENST00000580357 CEP290O15078 2479 aa18.79■□□□□ 0.6
IFT20-210ENST00000580357 TLR3O15455 904 aaKnown RBP18.78■□□□□ 0.6
IFT20-210ENST00000580357 PPFIA4O75335 1185 aa18.78■□□□□ 0.6
IFT20-210ENST00000580357 PURAQ00577 322 aaKnown RBP18.78■□□□□ 0.6
IFT20-210ENST00000580357 ARHGAP1Q07960 439 aa18.78■□□□□ 0.6
IFT20-210ENST00000580357 ITGA7Q13683 1181 aa18.78■□□□□ 0.6
IFT20-210ENST00000580357 DGKDQ16760 1214 aa18.78■□□□□ 0.6
IFT20-210ENST00000580357 TRIM60Q495X7 471 aa18.78■□□□□ 0.6
IFT20-210ENST00000580357 GALNT17Q6IS24 598 aa18.78■□□□□ 0.6
IFT20-210ENST00000580357 PPTC7Q8NI37 304 aa18.78■□□□□ 0.6
IFT20-210ENST00000580357 WASF1Q92558 559 aa18.78■□□□□ 0.6
IFT20-210ENST00000580357 MLXIPQ9HAP2 919 aa18.78■□□□□ 0.6
IFT20-210ENST00000580357 LIMCH1Q9UPQ0 1083 aa18.78■□□□□ 0.6
IFT20-210ENST00000580357 TRIOBPQ9H2D6 2365 aa18.78■□□□□ 0.6
IFT20-210ENST00000580357 LRRC37A2A6NM11 1700 aa18.77■□□□□ 0.6
IFT20-210ENST00000580357 MYL3P08590 195 aa18.77■□□□□ 0.6
IFT20-210ENST00000580357 NLRP5P59047 1200 aa18.77■□□□□ 0.6
IFT20-210ENST00000580357 TLE2Q04725 743 aa18.77■□□□□ 0.6
IFT20-210ENST00000580357 MYSM1Q5VVJ2 828 aa18.77■□□□□ 0.6
IFT20-210ENST00000580357 SLC43A3Q8NBI5 491 aa18.77■□□□□ 0.6
IFT20-210ENST00000580357 AFG1LQ8WV93 481 aa18.77■□□□□ 0.6
IFT20-210ENST00000580357 ZSCAN31Q96LW9 406 aaPredicted RBP18.77■□□□□ 0.6
IFT20-210ENST00000580357 UBIAD1Q9Y5Z9 338 aa18.77■□□□□ 0.6
IFT20-210ENST00000580357 KIAA1217Q5T5P2 1943 aa18.76■□□□□ 0.59
IFT20-210ENST00000580357 REXO1Q8N1G1 1221 aaKnown RBP18.76■□□□□ 0.59
IFT20-210ENST00000580357 SPATA33Q96N06 139 aa18.76■□□□□ 0.59
IFT20-210ENST00000580357 ANO3Q9BYT9 981 aa18.76■□□□□ 0.59
IFT20-210ENST00000580357 JADE2Q9NQC1 790 aa18.76■□□□□ 0.59
IFT20-210ENST00000580357 STK36Q9NRP7 1315 aa18.75■□□□□ 0.59
IFT20-210ENST00000580357 GGPS1O95749 300 aa18.75■□□□□ 0.59
IFT20-210ENST00000580357 CLTBP09497 229 aa18.75■□□□□ 0.59
IFT20-210ENST00000580357 PTGS1P23219 599 aa18.75■□□□□ 0.59
IFT20-210ENST00000580357 SREBF1P36956 1147 aa18.75■□□□□ 0.59
IFT20-210ENST00000580357 SP2Q02086 613 aa18.75■□□□□ 0.59
IFT20-210ENST00000580357 PTPN11Q06124 597 aaPredicted RBP18.75■□□□□ 0.59
IFT20-210ENST00000580357 RABEP1Q15276 862 aa18.75■□□□□ 0.59
IFT20-210ENST00000580357 ME3Q16798 604 aa18.75■□□□□ 0.59
IFT20-210ENST00000580357 LBHD1Q9BQE6 289 aaPredicted RBP18.75■□□□□ 0.59
IFT20-210ENST00000580357 MXRA8Q9BRK3 442 aa18.75■□□□□ 0.59
IFT20-210ENST00000580357 ZMYND8Q9ULU4 1186 aaPredicted RBP18.75■□□□□ 0.59
IFT20-210ENST00000580357 PQBP1O60828 265 aaKnown RBP18.74■□□□□ 0.59
IFT20-210ENST00000580357 MMP3P08254 477 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 CYP3A4P08684 503 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 SUPT20HL2P0C7V6 817 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 UBA1P22314 1058 aaKnown RBP18.74■□□□□ 0.59
IFT20-210ENST00000580357 BMP8BP34820 402 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 ZNF76P36508 570 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 MTMR1Q13613 665 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 JAKMIP3Q5VZ66 844 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 NFRKBQ6P4R8 1299 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 METTL7BQ6UX53 244 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 NIPA1Q7RTP0 329 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 GTF3C6Q969F1 213 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 ZFP91Q96JP5 570 aaPredicted RBP18.74■□□□□ 0.59
IFT20-210ENST00000580357 KIF2CQ99661 725 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 KATNAL1Q9BW62 490 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 TMEM39AQ9NV64 488 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 VPS54Q9P1Q0 977 aa18.74■□□□□ 0.59
IFT20-210ENST00000580357 PPFIA3O75145 1194 aa18.73■□□□□ 0.59
IFT20-210ENST00000580357 SYN1P17600 705 aa18.73■□□□□ 0.59
IFT20-210ENST00000580357 ITGB5P18084 799 aa18.73■□□□□ 0.59
IFT20-210ENST00000580357 ARHGAP4P98171 946 aa18.73■□□□□ 0.59
IFT20-210ENST00000580357 FAAP100Q0VG06 881 aa18.73■□□□□ 0.59
IFT20-210ENST00000580357 CEP55Q53EZ4 464 aa18.73■□□□□ 0.59
IFT20-210ENST00000580357 SH2B1Q9NRF2 756 aaPredicted RBP18.73■□□□□ 0.59
IFT20-210ENST00000580357 TMEM260Q9NX78 707 aa18.73■□□□□ 0.59
IFT20-210ENST00000580357 ORC3Q9UBD5 711 aaPredicted RBP18.73■□□□□ 0.59
IFT20-210ENST00000580357 PCDHA4Q9UN74 947 aa18.73■□□□□ 0.59
IFT20-210ENST00000580357 MEIS1O00470 390 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 NOP56O00567 594 aaKnown RBP18.72■□□□□ 0.59
IFT20-210ENST00000580357 KIAA0355O15063 1070 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 ST18O60284 1047 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 HOXD8P13378 290 aaPredicted RBP18.72■□□□□ 0.59
IFT20-210ENST00000580357 USP11P51784 963 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 SEMA3FQ13275 785 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 NBPF20Q3BBV1 942 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 CYFIP1Q7L576 1253 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 FAM126BQ8IXS8 530 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 BLIDQ8IZY5 108 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 DAGLBQ8NCG7 672 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 GDF15Q99988 308 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 PRDM5Q9NQX1 630 aaPredicted RBP18.72■□□□□ 0.59
IFT20-210ENST00000580357 PDLIM7Q9NR12 457 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 GRIN2DO15399 1336 aa18.72■□□□□ 0.59
IFT20-210ENST00000580357 ALPK3Q96L96 1907 aa18.71■□□□□ 0.59
IFT20-210ENST00000580357 A0A1W2PPC1 479 aa18.71■□□□□ 0.59
IFT20-210ENST00000580357 CD4P01730 458 aa18.71■□□□□ 0.59
IFT20-210ENST00000580357 RAG1P15918 1043 aa18.71■□□□□ 0.59
IFT20-210ENST00000580357 PSMC6P62333 389 aa18.71■□□□□ 0.59
IFT20-210ENST00000580357 HSDL1Q3SXM5 330 aa18.71■□□□□ 0.59
IFT20-210ENST00000580357 NECAB1Q8N987 351 aa18.71■□□□□ 0.59
IFT20-210ENST00000580357 LLPHQ9BRT6 129 aaKnown RBP18.71■□□□□ 0.59
IFT20-210ENST00000580357 KCNH7Q9NS40 1196 aa18.71■□□□□ 0.59
IFT20-210ENST00000580357 TRIM43BA6NCK2 446 aa18.7■□□□□ 0.58
IFT20-210ENST00000580357 CTDNEP1O95476 244 aa18.7■□□□□ 0.58
IFT20-210ENST00000580357 CHRDL2Q6WN34 429 aa18.7■□□□□ 0.58
IFT20-210ENST00000580357 CRYGNQ8WXF5 182 aa18.7■□□□□ 0.58
IFT20-210ENST00000580357 SEPT1Q8WYJ6 367 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms