RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	DYNC1LI2	O43237	492 aa	Predicted RBP	7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	EFCAB14	O75071	495 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	VAMP4	O75379	141 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	LTBR	P36941	435 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	IL15	P40933	162 aa	Predicted RBP	7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	MCAM	P43121	646 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	USP5	P45974	858 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	RFX5	P48382	616 aa	Predicted RBP	7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	CLK2	P49760	499 aa	Known RBP	7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	TIMM10	P62072	90 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	KCNMA1	Q12791	1236 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	COL19A1	Q14993	1142 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	SEPT2	Q15019	361 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	GORAB	Q5T7V8	394 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	FAM117B	Q6P1L5	589 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	TBC1D9	Q6ZT07	1266 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	ARMCX2	Q7L311	632 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	TMCO2	Q7Z6W1	182 aa	Predicted RBP	7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	KIAA2013	Q8IYS2	634 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	CCDC155	Q8N6L0	562 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	ASIC4	Q96FT7	647 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	RIPOR3	Q96MK2	946 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	C17orf80	Q9BSJ5	609 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	EHD4	Q9H223	541 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	ARHGEF10L	Q9HCE6	1279 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	CD207	Q9UJ71	328 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	NOD1	Q9Y239	953 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	AKAP2	Q9Y2D5	859 aa		7.28	□□□□□ -1.24
KPNB1-209	ENST00000580158	ABHD14A-ACY1	A0A1B0GW23	586 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158		A0A1W2PRG0	241 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158		H3BNC9	293 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	WDR46	O15213	610 aa	Known RBP	7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	PARN	O95453	639 aa	Known RBP	7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	DEFB103A	P81534	67 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	PTS	Q03393	145 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	IKBKE	Q14164	716 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	EPC2	Q52LR7	807 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	FAM47C	Q5HY64	1035 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	PDXDC2P	Q6P474	469 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	CNKSR3	Q6P9H4	555 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	ZBTB33	Q86T24	672 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	SPICE1	Q8N0Z3	855 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	ANKRD35	Q8N283	1001 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	XAGE2	Q96GT9	111 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	HINFP	Q9BQA5	517 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	POLR3E	Q9NVU0	708 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	HMG20B	Q9P0W2	317 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	CDV3	Q9UKY7	258 aa	Known RBP	7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	ADAMTS5	Q9UNA0	930 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158		Q9Y3F1	56 aa		7.27	□□□□□ -1.25
KPNB1-209	ENST00000580158	ACACB	O00763	2458 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	ATRX	P46100	2492 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	SCN10A	Q9Y5Y9	1956 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	DNAJC25-GNG10	A0A024R161	153 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	LOC730098	B7Z3J9	87 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	VWA5A	O00534	786 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	SDHB	P21912	280 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	GUCY1A2	P33402	732 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	CTDSPL2	Q05D32	466 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	CERS3	Q8IU89	383 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	CCDC144CP	Q8IYA2	1237 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	CCER1	Q8TC90	406 aa	Predicted RBP	7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	NEUROD6	Q96NK8	337 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	ARHGAP9	Q9BRR9	750 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	TEX13B	Q9BXU2	312 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	SEMA4A	Q9H3S1	761 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	IGFLR1	Q9H665	355 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	VCPKMT	Q9H867	229 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	GNE	Q9Y223	722 aa	Known RBP	7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	CTDP1	Q9Y5B0	961 aa	Predicted RBP	7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	GVINP1	Q7Z2Y8	2422 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	ASTN1	O14525	1302 aa		7.26	□□□□□ -1.25
KPNB1-209	ENST00000580158	MAP1B	P46821	2468 aa	Known RBP	7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	LMNA	P02545	664 aa	Known RBP	7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	ICAM3	P32942	547 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	NDUFV1	P49821	464 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	DLX2	Q07687	328 aa	Predicted RBP	7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	DHX9	Q08211	1270 aa	Known RBP	7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	CBLB	Q13191	982 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	CBX2	Q14781	532 aa	Predicted RBP	7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	KIAA0319	Q5VV43	1072 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	IQSEC1	Q6DN90	963 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	SNRNP48	Q6IEG0	339 aa	Known RBP	7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	TMEM179	Q6ZVK1	233 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158		Q6ZVU0	165 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	GPR161	Q8N6U8	529 aa	Known RBP	7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	CAGE1	Q8TC20	777 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	AFAP1L1	Q8TED9	768 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	PPP2R3C	Q969Q6	453 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	RPGRIP1	Q96KN7	1286 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	KCTD15	Q96SI1	283 aa	Predicted RBP	7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	LMAN2L	Q9H0V9	348 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	SH2B1	Q9NRF2	756 aa	Predicted RBP	7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	DLL3	Q9NYJ7	618 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	ZNF214	Q9UL59	606 aa	Predicted RBP	7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	PPP1R9A	Q9ULJ8	1098 aa		7.25	□□□□□ -1.25
KPNB1-209	ENST00000580158	TMX2	Q9Y320	296 aa		7.25	□□□□□ -1.25

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