RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 DDX41Q9UJV9 622 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 RSPH10B2B2RC85 870 aa14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 H3BNC9 293 aa14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 HAS3O00219 553 aa14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 PPFIA4O75335 1185 aa14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 ZMYM6O95789 1325 aa14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 RSPH10BP0C881 870 aa14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 EPC2Q52LR7 807 aa14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 TRAF7Q6Q0C0 670 aa14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 DHX37Q8IY37 1157 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 SYTL5Q8TDW5 730 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 MFSD14AQ96MC6 490 aa14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 RCAN3Q9UKA8 241 aa14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 MRVI1Q9Y6F6 885 aa14.28□□□□□ -0.12
CDK5RAP3-216ENST00000579853 H3BQ06 376 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 FGAP02671 866 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 HOXD8P13378 290 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MX1P20591 662 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MBTPS1Q14703 1052 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 COL19A1Q14993 1142 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 TCTN1Q2MV58 587 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 CCDC178Q5BJE1 867 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 VPS53Q5VIR6 699 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 ARHGEF16Q5VV41 709 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MFSD6Q6ZSS7 791 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 SERINC5Q86VE9 423 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 ADHFE1Q8IWW8 467 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MIER1Q8N108 512 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 DBF4BQ8NFT6 615 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 EVI5LQ96CN4 794 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 FBXL18Q96ME1 805 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 TAAR1Q96RJ0 339 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 YME1L1Q96TA2 773 aa14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 POP1Q99575 1024 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 RNF41Q9H4P4 317 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 NSUN3Q9H649 340 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MRPL11Q9Y3B7 192 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-216ENST00000579853 RIF1Q5UIP0 2472 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MYH7BA7E2Y1 1941 aa14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 C19orf67A6NJJ6 358 aa14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 CAND2O75155 1236 aa14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 ZP2Q05996 745 aa14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MKRN4PQ13434 485 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 GPM6BQ13491 265 aa14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 PLEKHG4Q58EX7 1191 aa14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 DGKHQ86XP1 1220 aa14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 ESR2Q92731 530 aa14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 TOP1MTQ969P6 601 aa14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 PTPRZ1P23471 2315 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-216ENST00000579853 NR3C2P08235 984 aa14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 ZNF286BP0CG31 522 aa14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 HSPD1P10809 573 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 THPOP40225 353 aa14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 CDC37Q16543 378 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 TCEAL5Q5H9L2 206 aa14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 EP400NLQ6ZTU2 488 aa14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 FBXO11Q86XK2 927 aa14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 TMEM192Q8IY95 271 aa14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 SEPT8Q92599 483 aa14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 UBA5Q9GZZ9 404 aa14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MAP3K20Q9NYL2 800 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 ZBTB47Q9UFB7 747 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 COL4A6Q14031 1691 aa14.25□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MYH6P13533 1939 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 C17orf102A2RUQ5 167 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 RB1P06400 928 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 TGFB3P10600 412 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 EIF2AK2P19525 551 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MCMDC2Q4G0Z9 681 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 ASPRV1Q53RT3 343 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 MYSM1Q5VVJ2 828 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 IQCA1Q86XH1 822 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 ADGRF4Q8IZF3 695 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 TBC1D5Q92609 795 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 APBB2Q92870 758 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 ATP6V0A1Q93050 837 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 WNT8BQ93098 351 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 LMAN2LQ9H0V9 348 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 PXMP2Q9NR77 195 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 CLDND1Q9NY35 253 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 COL20A1Q9P218 1284 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 RWDD3Q9Y3V2 267 aa14.24□□□□□ -0.13
CDK5RAP3-216ENST00000579853 GOLGA8HP0CJ92 632 aa14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 GNAT1P11488 350 aa14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 ZNF200P98182 395 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 SMAD2Q15796 467 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 PKN1Q16512 942 aa14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 C20orf194Q5TEA3 1177 aa14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 SAMD3Q8N6K7 520 aa14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 PNMA1Q8ND90 353 aa14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 SPATA33Q96N06 139 aa14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 PRRX2Q99811 253 aa14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 IFIH1Q9BYX4 1025 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 KAT14Q9H8E8 782 aa14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 TECTAO75443 2155 aa14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 RALGAPA2Q2PPJ7 1873 aa14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 NLRC5Q86WI3 1866 aa14.23□□□□□ -0.13
CDK5RAP3-216ENST00000579853 DHX16O60231 1041 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-216ENST00000579853 GGPS1O95749 300 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms