RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 NPHS2Q9NP85 383 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 RNF19AQ9NV58 838 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 EXOC1Q9NV70 894 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 BIN1O00499 593 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 SGTAO43765 313 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 DESP17661 470 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 POU3F3P20264 500 aaPredicted RBP7.46□□□□□ -1.22
COPS3-216ENST00000579716 ENPP1P22413 925 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 HSPA4P34932 840 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 STT3AP46977 705 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 RXRGP48443 463 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 NFKB2Q00653 900 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 PAK2Q13177 524 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 TCEA2Q15560 299 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 CT47A1Q5JQC4 288 aaPredicted RBP7.46□□□□□ -1.22
COPS3-216ENST00000579716 HP1BP3Q5SSJ5 553 aaPredicted RBP7.46□□□□□ -1.22
COPS3-216ENST00000579716 ABRAXAS1Q6UWZ7 409 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 TOGARAM2Q6ZUX3 1019 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 BTN2A1Q7KYR7 527 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 HS2ST1Q7LGA3 356 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 PDZD3Q86UT5 571 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 OR8H1Q8NGG4 311 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 STK35Q8TDR2 534 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 CEP95Q96GE4 821 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 SEC16BQ96JE7 1060 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 UROC1Q96N76 676 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 GBP4Q96PP9 640 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 SLX1AQ9BQ83 275 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 GTPBP4Q9BZE4 634 aaKnown RBP7.46□□□□□ -1.22
COPS3-216ENST00000579716 CCDC113Q9H0I3 377 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 CDH19Q9H159 772 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 VPS33BQ9H267 617 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 MKS1Q9NXB0 559 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 ARHGAP28Q9P2N2 729 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 STAP2Q9UGK3 403 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 CTNNA3Q9UI47 895 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 FAM184BQ9ULE4 1060 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 PLAAQ9Y263 795 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 ITIH6Q6UXX5 1313 aa7.46□□□□□ -1.22
COPS3-216ENST00000579716 ZNF503-AS2A6NEH8 195 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 CCDC85CA6NKD9 419 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 KLF4O43474 513 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 MTRF1O75570 445 aaKnown RBP7.45□□□□□ -1.22
COPS3-216ENST00000579716 AGR2O95994 175 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 SMARCA1P28370 1054 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 GUCY2FP51841 1108 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 IFRD2Q12894 506 aaPredicted RBP7.45□□□□□ -1.22
COPS3-216ENST00000579716 MOGSQ13724 837 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 TTLL4Q14679 1199 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 SLC9A5Q14940 896 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 AOC3Q16853 763 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 INF2Q27J81 1249 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 UNC5DQ6UXZ4 953 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 CYP26C1Q6V0L0 522 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 EEPD1Q7L9B9 569 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 SDCCAG8Q86SQ7 713 aaPredicted RBP7.45□□□□□ -1.22
COPS3-216ENST00000579716 SMYD4Q8IYR2 804 aaPredicted RBP7.45□□□□□ -1.22
COPS3-216ENST00000579716 MAGEB6Q8N7X4 407 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 SPATA18Q8TC71 538 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 BRSK1Q8TDC3 778 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 TMC1Q8TDI8 760 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 USP6NLQ92738 828 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 CRELD1Q96HD1 420 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 MOGAT1Q96PD6 335 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 KIF2CQ99661 725 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 NCAPGQ9BPX3 1015 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 SARGQ9BW04 601 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 FAM126AQ9BYI3 521 aaPredicted RBP7.45□□□□□ -1.22
COPS3-216ENST00000579716 EHD4Q9H223 541 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 TNKS2Q9H2K2 1166 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 PRDM7Q9NQW5 492 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 IRAK4Q9NWZ3 460 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 DONSONQ9NYP3 566 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 GTF2IRD1Q9UHL9 959 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 CFAP45Q9UL16 551 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 NOB1Q9ULX3 412 aaKnown RBP7.45□□□□□ -1.22
COPS3-216ENST00000579716 LUC7L2Q9Y383 392 aaKnown RBP7.45□□□□□ -1.22
COPS3-216ENST00000579716 R3HCC1Q9Y3T6 440 aaKnown RBP7.45□□□□□ -1.22
COPS3-216ENST00000579716 USP31Q70CQ4 1352 aa7.45□□□□□ -1.22
COPS3-216ENST00000579716 CFAP65Q6ZU64 1925 aaKnown RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 ANO9A1A5B4 782 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 ANKRD18BA2A2Z9 1011 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 J3KRW8 73 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 NDUFB5O43674 189 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 PLOD3O60568 738 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 PPFIA2O75334 1257 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 CNOT4O95628 575 aaKnown RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 ATP6V1E1P36543 226 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 PAPOLAP51003 745 aaKnown RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 CSE1LP55060 971 aaKnown RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 GABREP78334 506 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 MRPS35P82673 323 aaKnown RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 ID3Q02535 119 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 PPP2R5CQ13362 524 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 AP3B2Q13367 1082 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 PIN1Q13526 163 aaPredicted RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 MYBPC3Q14896 1274 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 PLCB4Q15147 1175 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 DALRD3Q5D0E6 543 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms