RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 ADAM15Q13444 863 aa15.56■□□□□ 0.08
CDK5RAP3-213ENST00000579605 HIC1Q14526 733 aa15.56■□□□□ 0.08
CDK5RAP3-213ENST00000579605 IFNL3Q8IZI9 196 aa15.56■□□□□ 0.08
CDK5RAP3-213ENST00000579605 DNERQ8NFT8 737 aa15.56■□□□□ 0.08
CDK5RAP3-213ENST00000579605 IL17RAQ96F46 866 aa15.56■□□□□ 0.08
CDK5RAP3-213ENST00000579605 OSBPL7Q9BZF2 842 aa15.56■□□□□ 0.08
CDK5RAP3-213ENST00000579605 FRMPD2Q68DX3 1309 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-213ENST00000579605 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 TSPY2A6NKD2 308 aa15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 SORBS3O60504 671 aa15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 SLC3A2P08195 630 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 BMPR1AP36894 532 aa15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 RRP1P56182 461 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 HNRNPUQ00839 825 aaKnown RBP eCLIP15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 ASIC4Q96FT7 647 aa15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 C11orf84Q9BUA3 381 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 KATNAL1Q9BW62 490 aa15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 LMAN2LQ9H0V9 348 aa15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 IL17RBQ9NRM6 502 aa15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 LCTP09848 1927 aa15.55■□□□□ 0.08
CDK5RAP3-213ENST00000579605 MYO15AQ9UKN7 3530 aa15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 PTPRZ1P23471 2315 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 PLIN4Q96Q06 1357 aa15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 PRR23AA6NEV1 266 aa15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 PATL2C9JE40 543 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 M0R2C6 588 aa15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 RGS20O76081 388 aa15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 PDGFBP01127 241 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 RB1P06400 928 aa15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 CTSHP09668 335 aa15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 DCAF4Q8WV16 495 aa15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 APPBP2Q92624 585 aa15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 MSLNLQ96KJ4 702 aa15.54■□□□□ 0.08
CDK5RAP3-213ENST00000579605 PROB1E7EW31 1015 aa15.53■□□□□ 0.08
CDK5RAP3-213ENST00000579605 EYA4O95677 639 aa15.53■□□□□ 0.08
CDK5RAP3-213ENST00000579605 GNAT2P19087 354 aa15.53■□□□□ 0.08
CDK5RAP3-213ENST00000579605 PPARAQ07869 468 aa15.53■□□□□ 0.08
CDK5RAP3-213ENST00000579605 PPP4R3BQ5MIZ7 849 aa15.53■□□□□ 0.08
CDK5RAP3-213ENST00000579605 RBM23Q86U06 439 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-213ENST00000579605 NACAP1Q9BZK3 213 aa15.53■□□□□ 0.08
CDK5RAP3-213ENST00000579605 CLEC1BQ9P126 229 aa15.53■□□□□ 0.08
CDK5RAP3-213ENST00000579605 COL4A6Q14031 1691 aa15.53■□□□□ 0.08
CDK5RAP3-213ENST00000579605 MYO7AQ13402 2215 aa15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 C5orf67F2Z3F1 127 aa15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 HAS3O00219 553 aa15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 RNF113AO15541 343 aaKnown RBP15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 GALR2O43603 387 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 RAB11FIP3O75154 756 aa15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 CBX2Q14781 532 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 USH1GQ495M9 461 aa15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 BTNL9Q6UXG8 535 aa15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 ADGRD2Q7Z7M1 963 aa15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 ZBTB33Q86T24 672 aa15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 TBC1D5Q92609 795 aa15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 TAAR1Q96RJ0 339 aa15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 USP15Q9Y4E8 981 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-213ENST00000579605 SPTBN4Q9H254 2564 aa15.52■□□□□ 0.07
CDK5RAP3-213ENST00000579605 DMDP11532 3685 aa15.51■□□□□ 0.07
CDK5RAP3-213ENST00000579605 RANBP6O60518 1105 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-213ENST00000579605 F2P00734 622 aa15.51■□□□□ 0.07
CDK5RAP3-213ENST00000579605 CTDSPL2Q05D32 466 aa15.51■□□□□ 0.07
CDK5RAP3-213ENST00000579605 SERINC5Q86VE9 423 aa15.51■□□□□ 0.07
CDK5RAP3-213ENST00000579605 ADSSL1Q8N142 457 aa15.51■□□□□ 0.07
CDK5RAP3-213ENST00000579605 ATP6V0A1Q93050 837 aa15.51■□□□□ 0.07
CDK5RAP3-213ENST00000579605 PHF7Q9BWX1 381 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-213ENST00000579605 NAPBQ9H115 298 aa15.51■□□□□ 0.07
CDK5RAP3-213ENST00000579605 DDX41Q9UJV9 622 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-213ENST00000579605 BARX2Q9UMQ3 279 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-213ENST00000579605 C17orf102A2RUQ5 167 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 NRIP1P48552 1158 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 LAMC2Q13753 1193 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 CAMK1Q14012 370 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 STXBP2Q15833 593 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 FRMD5Q7Z6J6 570 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 KBTBD3Q8NAB2 608 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 SMRP1Q8NCR6 262 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 PANK1Q8TE04 598 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 PPP2R3CQ969Q6 453 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 RIPOR3Q96MK2 946 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 SEC62Q99442 399 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 RWDD3Q9Y3V2 267 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 MRVI1Q9Y6F6 885 aa15.5■□□□□ 0.07
CDK5RAP3-213ENST00000579605 TREHO43280 583 aa15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 SMARCA5O60264 1052 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 HMMRO75330 724 aa15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 KRT37O76014 449 aa15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 MMP1P03956 469 aa15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 LINC00271P0C7V0 271 aa15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 DNAJB1P25685 340 aa15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 COASYQ13057 564 aa15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 BTG3Q14201 252 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 EFHBQ8N7U6 833 aa15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 PPTC7Q8NI37 304 aa15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 NSUN6Q8TEA1 469 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 NKD2Q969F2 451 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 PLAGL2Q9UPG8 496 aa15.49■□□□□ 0.07
CDK5RAP3-213ENST00000579605 MED19A0JLT2 244 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-213ENST00000579605 SP100P23497 879 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-213ENST00000579605 ICAM3P32942 547 aa15.48■□□□□ 0.07
CDK5RAP3-213ENST00000579605 NBL1P41271 181 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms