RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 MTMR8Q96EF0 704 aa22.34■■□□□ 1.17
CDKN2A-213ENST00000579122 PDCD2LQ9BRP1 358 aa22.34■■□□□ 1.17
CDKN2A-213ENST00000579122 LMCD1Q9NZU5 365 aa22.34■■□□□ 1.17
CDKN2A-213ENST00000579122 MYH6P13533 1939 aa22.33■■□□□ 1.17
CDKN2A-213ENST00000579122 TCF20Q9UGU0 1960 aaKnown RBP22.33■■□□□ 1.17
CDKN2A-213ENST00000579122 KLRF2D3W0D1 207 aa22.33■■□□□ 1.17
CDKN2A-213ENST00000579122 PPFIA4O75335 1185 aa22.33■■□□□ 1.17
CDKN2A-213ENST00000579122 RGS20O76081 388 aa22.33■■□□□ 1.17
CDKN2A-213ENST00000579122 GJB5O95377 273 aa22.33■■□□□ 1.17
CDKN2A-213ENST00000579122 TRIM71Q2Q1W2 868 aaKnown RBP22.33■■□□□ 1.17
CDKN2A-213ENST00000579122 MYSM1Q5VVJ2 828 aa22.33■■□□□ 1.17
CDKN2A-213ENST00000579122 TRAF7Q6Q0C0 670 aa22.33■■□□□ 1.17
CDKN2A-213ENST00000579122 TMCO2Q7Z6W1 182 aaPredicted RBP22.33■■□□□ 1.17
CDKN2A-213ENST00000579122 RAD9AQ99638 391 aa22.33■■□□□ 1.17
CDKN2A-213ENST00000579122 C1QTNF1Q9BXJ1 281 aa22.33■■□□□ 1.17
CDKN2A-213ENST00000579122 ZBTB5O15062 677 aa22.32■■□□□ 1.16
CDKN2A-213ENST00000579122 PPP1R11O60927 126 aaPredicted RBP22.32■■□□□ 1.16
CDKN2A-213ENST00000579122 IGHDP01880 384 aa22.32■■□□□ 1.16
CDKN2A-213ENST00000579122 MYCLP12524 364 aaPredicted RBP22.32■■□□□ 1.16
CDKN2A-213ENST00000579122 IKBKEQ14164 716 aa22.32■■□□□ 1.16
CDKN2A-213ENST00000579122 SEC23AQ15436 765 aa22.32■■□□□ 1.16
CDKN2A-213ENST00000579122 TCTN1Q2MV58 587 aa22.32■■□□□ 1.16
CDKN2A-213ENST00000579122 CELF3Q5SZQ8 465 aaKnown RBP22.32■■□□□ 1.16
CDKN2A-213ENST00000579122 VSIG10LQ86VR7 867 aa22.32■■□□□ 1.16
CDKN2A-213ENST00000579122 MAD2L2Q9UI95 211 aa22.32■■□□□ 1.16
CDKN2A-213ENST00000579122 PCDHA1Q9Y5I3 950 aa22.32■■□□□ 1.16
CDKN2A-213ENST00000579122 COL4A4P53420 1690 aaPredicted RBP22.31■■□□□ 1.16
CDKN2A-213ENST00000579122 ZNF618Q5T7W0 954 aa22.31■■□□□ 1.16
CDKN2A-213ENST00000579122 WNT8BQ93098 351 aa22.31■■□□□ 1.16
CDKN2A-213ENST00000579122 SPATA33Q96N06 139 aa22.31■■□□□ 1.16
CDKN2A-213ENST00000579122 RAPGEFL1Q9UHV5 662 aa22.31■■□□□ 1.16
CDKN2A-213ENST00000579122 PALM3A6NDB9 673 aaPredicted RBP22.3■■□□□ 1.16
CDKN2A-213ENST00000579122 TGFB3P10600 412 aa22.3■■□□□ 1.16
CDKN2A-213ENST00000579122 ERVK-21P61565 698 aa22.3■■□□□ 1.16
CDKN2A-213ENST00000579122 ZNF200P98182 395 aaPredicted RBP22.3■■□□□ 1.16
CDKN2A-213ENST00000579122 TRAF1Q13077 416 aa22.3■■□□□ 1.16
CDKN2A-213ENST00000579122 PGM5Q15124 567 aa22.3■■□□□ 1.16
CDKN2A-213ENST00000579122 HSDL1Q3SXM5 330 aa22.3■■□□□ 1.16
CDKN2A-213ENST00000579122 GDPD5Q8WTR4 605 aa22.3■■□□□ 1.16
CDKN2A-213ENST00000579122 TGS1Q96RS0 853 aaKnown RBP22.3■■□□□ 1.16
CDKN2A-213ENST00000579122 EMSYQ7Z589 1322 aa22.3■■□□□ 1.16
CDKN2A-213ENST00000579122 LGR5O75473 907 aa22.29■■□□□ 1.16
CDKN2A-213ENST00000579122 GGPS1O95749 300 aa22.29■■□□□ 1.16
CDKN2A-213ENST00000579122 HOXA13P31271 388 aaPredicted RBP22.29■■□□□ 1.16
CDKN2A-213ENST00000579122 MBTPS1Q14703 1052 aa22.29■■□□□ 1.16
CDKN2A-213ENST00000579122 LINC01553A4QN01 128 aa22.28■■□□□ 1.16
CDKN2A-213ENST00000579122 UBA1P22314 1058 aaKnown RBP22.28■■□□□ 1.16
CDKN2A-213ENST00000579122 CCND2P30279 289 aa22.28■■□□□ 1.16
CDKN2A-213ENST00000579122 SP2Q02086 613 aa22.28■■□□□ 1.16
CDKN2A-213ENST00000579122 HIC1Q14526 733 aa22.28■■□□□ 1.16
CDKN2A-213ENST00000579122 CYB5R4Q7L1T6 521 aa22.28■■□□□ 1.16
CDKN2A-213ENST00000579122 SERINC5Q86VE9 423 aa22.28■■□□□ 1.16
CDKN2A-213ENST00000579122 IL31RAQ8NI17 732 aa22.28■■□□□ 1.16
CDKN2A-213ENST00000579122 C16orf70Q9BSU1 422 aa22.28■■□□□ 1.16
CDKN2A-213ENST00000579122 SUGCTQ9HAC7 445 aa22.28■■□□□ 1.16
CDKN2A-213ENST00000579122 GCOM1H8Y6P7 765 aaPredicted RBP22.27■■□□□ 1.16
CDKN2A-213ENST00000579122 SORBS3O60504 671 aa22.27■■□□□ 1.16
CDKN2A-213ENST00000579122 POLR2MP0CAP2 368 aa22.27■■□□□ 1.16
CDKN2A-213ENST00000579122 IL25Q9H293 177 aa22.27■■□□□ 1.16
CDKN2A-213ENST00000579122 RIOX1Q9H6W3 641 aa22.27■■□□□ 1.16
CDKN2A-213ENST00000579122 MTUS1Q9ULD2 1270 aa22.27■■□□□ 1.16
CDKN2A-213ENST00000579122 MYH7BA7E2Y1 1941 aa22.27■■□□□ 1.16
CDKN2A-213ENST00000579122 RSPH10B2B2RC85 870 aa22.26■■□□□ 1.15
CDKN2A-213ENST00000579122 RSPH10BP0C881 870 aa22.26■■□□□ 1.15
CDKN2A-213ENST00000579122 TRDNQ13061 729 aa22.26■■□□□ 1.15
CDKN2A-213ENST00000579122 GRM4Q14833 912 aa22.26■■□□□ 1.15
CDKN2A-213ENST00000579122 SLC35G1Q2M3R5 365 aa22.26■■□□□ 1.15
CDKN2A-213ENST00000579122 HOMER1Q86YM7 354 aa22.26■■□□□ 1.15
CDKN2A-213ENST00000579122 PIGSQ96S52 555 aa22.26■■□□□ 1.15
CDKN2A-213ENST00000579122 MLXIPQ9HAP2 919 aa22.26■■□□□ 1.15
CDKN2A-213ENST00000579122 INSL6Q9Y581 213 aa22.26■■□□□ 1.15
CDKN2A-213ENST00000579122 C17orf102A2RUQ5 167 aa22.25■■□□□ 1.15
CDKN2A-213ENST00000579122 AMHP03971 560 aa22.25■■□□□ 1.15
CDKN2A-213ENST00000579122 HOXC8P31273 242 aa22.25■■□□□ 1.15
CDKN2A-213ENST00000579122 THPOP40225 353 aa22.25■■□□□ 1.15
CDKN2A-213ENST00000579122 MKRN4PQ13434 485 aaPredicted RBP22.25■■□□□ 1.15
CDKN2A-213ENST00000579122 FAM117BQ6P1L5 589 aa22.25■■□□□ 1.15
CDKN2A-213ENST00000579122 DBF4BQ8NFT6 615 aa22.25■■□□□ 1.15
CDKN2A-213ENST00000579122 H3BRB1 525 aa22.24■■□□□ 1.15
CDKN2A-213ENST00000579122 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.24■■□□□ 1.15
CDKN2A-213ENST00000579122 FCHSD1Q86WN1 690 aa22.24■■□□□ 1.15
CDKN2A-213ENST00000579122 GPKOWQ92917 476 aaPredicted RBP eCLIP22.24■■□□□ 1.15
CDKN2A-213ENST00000579122 ATP6V0A1Q93050 837 aa22.24■■□□□ 1.15
CDKN2A-213ENST00000579122 TUT1Q9H6E5 874 aaKnown RBP22.24■■□□□ 1.15
CDKN2A-213ENST00000579122 SIP14410 1827 aa22.23■■□□□ 1.15
CDKN2A-213ENST00000579122 PNMA6FA0A0J9YX94 578 aa22.23■■□□□ 1.15
CDKN2A-213ENST00000579122 STAM2O75886 525 aa22.23■■□□□ 1.15
CDKN2A-213ENST00000579122 PLA2G5P39877 138 aa22.23■■□□□ 1.15
CDKN2A-213ENST00000579122 HTRA4P83105 476 aaPredicted RBP22.23■■□□□ 1.15
CDKN2A-213ENST00000579122 GNPTABQ3T906 1256 aa22.23■■□□□ 1.15
CDKN2A-213ENST00000579122 PLEKHG4Q58EX7 1191 aa22.23■■□□□ 1.15
CDKN2A-213ENST00000579122 ZFP91Q96JP5 570 aaPredicted RBP22.23■■□□□ 1.15
CDKN2A-213ENST00000579122 EPHX3Q9H6B9 360 aa22.23■■□□□ 1.15
CDKN2A-213ENST00000579122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.22■■□□□ 1.15
CDKN2A-213ENST00000579122 ERICH2A1L162 156 aa22.22■■□□□ 1.15
CDKN2A-213ENST00000579122 IFIT3O14879 490 aaKnown RBP22.22■■□□□ 1.15
CDKN2A-213ENST00000579122 CYTH3O43739 400 aa22.22■■□□□ 1.15
CDKN2A-213ENST00000579122 CAND2O75155 1236 aa22.22■■□□□ 1.15
CDKN2A-213ENST00000579122 LGALS2P05162 132 aa22.22■■□□□ 1.15
CDKN2A-213ENST00000579122 SMIM10L2AP0DMW4 78 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms