RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 HOMER1Q86YM7 354 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 HERC6Q8IVU3 1022 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 KCTD17Q8N5Z5 321 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 C7orf31Q8N865 590 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 RGS22Q8NE09 1264 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 IL31RAQ8NI17 732 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 NSUN6Q8TEA1 469 aaKnown RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 ANKS1AQ92625 1134 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 KHSRPQ92945 711 aaKnown RBP eCLIP4.48□□□□□ -1.69
NUP85-209ENST00000578987 ZSCAN10Q96SZ4 725 aaPredicted RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 MPHOSPH6Q99547 160 aaKnown RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 SEZ6LQ9BYH1 1024 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 RWDD1Q9H446 243 aaPredicted RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 RNF41Q9H4P4 317 aaPredicted RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 EPHX3Q9H6B9 360 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 PXMP2Q9NR77 195 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 DIAPH3Q9NSV4 1193 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 DDX41Q9UJV9 622 aaKnown RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 MRPL11Q9Y3B7 192 aaKnown RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 TELO2Q9Y4R8 837 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 KIAA1671Q9BY89 1806 aa4.48□□□□□ -1.69
NUP85-209ENST00000578987 SPTBN5Q9NRC6 3674 aaKnown RBP4.48□□□□□ -1.69
NUP85-209ENST00000578987 ABCB11O95342 1321 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 WDR19Q8NEZ3 1342 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 RAD50Q92878 1312 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 RALGAPA2Q2PPJ7 1873 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 LOC102724159A0A0B4J2E5 919 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 PITPNM1O00562 1244 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 LPXNO60711 386 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 EIF3JO75822 258 aaKnown RBP4.47□□□□□ -1.69
NUP85-209ENST00000578987 RGS20O76081 388 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 UPP2O95045 317 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 PFKMP08237 780 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 PCP11498 1178 aaKnown RBP4.47□□□□□ -1.69
NUP85-209ENST00000578987 SELPP16109 830 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 POU3F3P20264 500 aaPredicted RBP4.47□□□□□ -1.69
NUP85-209ENST00000578987 PDE4AP27815 886 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 RFC2P35250 354 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 KCNJ6P48051 423 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 IRX6P78412 446 aaPredicted RBP4.47□□□□□ -1.69
NUP85-209ENST00000578987 NUCB1Q02818 461 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 PTPN11Q06124 597 aaPredicted RBP4.47□□□□□ -1.69
NUP85-209ENST00000578987 MBTPS1Q14703 1052 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 PGM5Q15124 567 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 PWP2Q15269 919 aaKnown RBP4.47□□□□□ -1.69
NUP85-209ENST00000578987 SEC23AQ15436 765 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 DGKDQ16760 1214 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 IMMTQ16891 758 aaKnown RBP4.47□□□□□ -1.69
NUP85-209ENST00000578987 TRIM71Q2Q1W2 868 aaKnown RBP4.47□□□□□ -1.69
NUP85-209ENST00000578987 ASPRV1Q53RT3 343 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 IFIT1BQ5T764 474 aaKnown RBP4.47□□□□□ -1.69
NUP85-209ENST00000578987 UTP14CQ5TAP6 766 aaKnown RBP4.47□□□□□ -1.69
NUP85-209ENST00000578987 MYSM1Q5VVJ2 828 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 SMYD5Q6GMV2 418 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 LRRC8DQ7L1W4 858 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 MCF2L2Q86YR7 1114 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 SMC5Q8IY18 1101 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 DBF4BQ8NFT6 615 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 PHOSPHO2Q8TCD6 241 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 GDPD5Q8WTR4 605 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 SPATA33Q96N06 139 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 PIGSQ96S52 555 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 IWS1Q96ST2 819 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 SLC9A7Q96T83 725 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 PDCD2LQ9BRP1 358 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 UBAC1Q9BSL1 405 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 TRAIPQ9BWF2 469 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 AMNQ9BXJ7 453 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 TSPYL2Q9H2G4 693 aaPredicted RBP4.47□□□□□ -1.69
NUP85-209ENST00000578987 OSBPL3Q9H4L5 887 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 SUGCTQ9HAC7 445 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 CD320Q9NPF0 282 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 RTEL1Q9NZ71 1219 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 GTF2IRD1Q9UHL9 959 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 MAD2L2Q9UI95 211 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 MRVI1Q9Y6F6 885 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 TAF6LQ9Y6J9 622 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 PLXNA4Q9HCM2 1894 aa4.47□□□□□ -1.69
NUP85-209ENST00000578987 ZMYM6O95789 1325 aa4.46□□□□□ -1.69
NUP85-209ENST00000578987 CUL9Q8IWT3 2517 aa4.46□□□□□ -1.69
NUP85-209ENST00000578987 MYO10Q9HD67 2058 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 PALM3A6NDB9 673 aaPredicted RBP4.46□□□□□ -1.7
NUP85-209ENST00000578987 FAM86C2PA6NEL3 165 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 HAS3O00219 553 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 IFIT3O14879 490 aaKnown RBP4.46□□□□□ -1.7
NUP85-209ENST00000578987 TREHO43280 583 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 CYTH3O43739 400 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 PPFIA4O75335 1185 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 GGPS1O95749 300 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 CXCL10P02778 98 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 HMGB1P09429 215 aaKnown RBP4.46□□□□□ -1.7
NUP85-209ENST00000578987 THPOP40225 353 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 HSD17B4P51659 736 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 MRPS9P82933 396 aaKnown RBP4.46□□□□□ -1.7
NUP85-209ENST00000578987 SP4Q02446 784 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 PTK7Q13308 1070 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 LAMC2Q13753 1193 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 IKBKEQ14164 716 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 CCDC178Q5BJE1 867 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 CELF3Q5SZQ8 465 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms