RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.92□□□□□ -1.3
PTPRM-207ENST00000578571 LRPPRCP42704 1394 aaKnown RBP6.92□□□□□ -1.3
PTPRM-207ENST00000578571 ADAMTS13Q76LX8 1427 aa6.92□□□□□ -1.3
PTPRM-207ENST00000578571 YTHDC2Q9H6S0 1430 aaKnown RBP6.92□□□□□ -1.3
PTPRM-207ENST00000578571 NKTRP30414 1462 aaKnown RBP6.92□□□□□ -1.3
PTPRM-207ENST00000578571 NRXN3Q9Y4C0 1643 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 KNDC1Q76NI1 1749 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 A0A1W2PQ45 241 aaPredicted RBP6.91□□□□□ -1.3
PTPRM-207ENST00000578571 A0A1W2PQY0 241 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 ZNF503-AS2A6NEH8 195 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 ADCY3O60266 1144 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 GLI1P08151 1106 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 SNRPB2P08579 225 aaKnown RBP6.91□□□□□ -1.3
PTPRM-207ENST00000578571 KCNA6P17658 529 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 GALK1P51570 392 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 BMS1Q14692 1282 aaKnown RBP6.91□□□□□ -1.3
PTPRM-207ENST00000578571 SLC14A2Q15849 920 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 KCNMB1Q16558 191 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 PRSS53Q2L4Q9 553 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 CCDC144BQ3MJ40 725 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 HLA-DQA1Q5Y7H0 255 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 LRRC47Q8N1G4 583 aaKnown RBP6.91□□□□□ -1.3
PTPRM-207ENST00000578571 KREMEN2Q8NCW0 462 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 C1orf159Q96HA4 380 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 DNAJC7Q99615 494 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 CLEC1BQ9P126 229 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 GPR160Q9UJ42 338 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 ABCC11Q96J66 1382 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 USP47Q96K76 1375 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 PTCH1Q13635 1447 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 FAM135BQ49AJ0 1406 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 DLC1Q96QB1 1528 aa6.91□□□□□ -1.3
PTPRM-207ENST00000578571 WTIPA6NIX2 430 aaPredicted RBP6.9□□□□□ -1.3
PTPRM-207ENST00000578571 ARNTLO00327 626 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 TBC1D8O95759 1140 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 PLS3P13797 630 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 ECI1P42126 302 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 SSRP1Q08945 709 aaKnown RBP6.9□□□□□ -1.3
PTPRM-207ENST00000578571 HSP90AA2PQ14568 343 aaPredicted RBP6.9□□□□□ -1.3
PTPRM-207ENST00000578571 SNX17Q15036 470 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 NBPF8Q3BBV2 869 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 TMEM67Q5HYA8 995 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 MBLAC2Q68D91 279 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 DENND5AQ6IQ26 1287 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 GALNT18Q6P9A2 607 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 DPH6Q7L8W6 267 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 TMEM145Q8NBT3 493 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 CCDC140Q96MF4 163 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 AARSD1Q9BTE6 412 aaKnown RBP6.9□□□□□ -1.3
PTPRM-207ENST00000578571 IER2Q9BTL4 223 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 STK26Q9P289 416 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 USP35Q9P2H5 1018 aa6.9□□□□□ -1.3
PTPRM-207ENST00000578571 CENPJQ9HC77 1338 aaPredicted RBP6.9□□□□□ -1.3
PTPRM-207ENST00000578571 TECPR2O15040 1411 aa6.9□□□□□ -1.31
PTPRM-207ENST00000578571 CPS1P31327 1500 aa6.9□□□□□ -1.31
PTPRM-207ENST00000578571 ADGRB1O14514 1584 aa6.9□□□□□ -1.31
PTPRM-207ENST00000578571 STRCQ7RTU9 1775 aa6.9□□□□□ -1.31
PTPRM-207ENST00000578571 DLX3O60479 287 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 PAMP19021 973 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 TMF1P82094 1093 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 IFRD2Q12894 506 aaPredicted RBP6.89□□□□□ -1.31
PTPRM-207ENST00000578571 SLC35F1Q5T1Q4 408 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 YOD1Q5VVQ6 348 aaPredicted RBP6.89□□□□□ -1.31
PTPRM-207ENST00000578571 TMEM132EQ6IEE7 984 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 CPNE8Q86YQ8 564 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 ASIC4Q96FT7 647 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 PIF1Q9H611 641 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 ZSWIM4Q9H7M6 989 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 CWC22Q9HCG8 908 aaKnown RBP6.89□□□□□ -1.31
PTPRM-207ENST00000578571 IMPACTQ9P2X3 320 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 TMEFF2Q9UIK5 374 aaPredicted RBP6.89□□□□□ -1.31
PTPRM-207ENST00000578571 ACSL6Q9UKU0 697 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 YBX2Q9Y2T7 364 aaKnown RBP6.89□□□□□ -1.31
PTPRM-207ENST00000578571 TAF6LQ9Y6J9 622 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 METP08581 1390 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 NCOA3Q9Y6Q9 1424 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 NWD1Q149M9 1564 aa6.89□□□□□ -1.31
PTPRM-207ENST00000578571 SETD1AO15047 1707 aaKnown RBP6.89□□□□□ -1.31
PTPRM-207ENST00000578571 CHD2O14647 1828 aaKnown RBP6.88□□□□□ -1.31
PTPRM-207ENST00000578571 SBNO2Q9Y2G9 1366 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 EVC2Q86UK5 1308 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 KDM2BQ8NHM5 1336 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 TRAV20A0A0B4J274 112 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 NPHP3-ACAD11A0A0J9YXS1 232 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 CPP00450 1065 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 MSL3P1P0C860 447 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 FGFR1P11362 822 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 L1CAMP32004 1257 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 KCNJ6P48051 423 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 MVKQ03426 396 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 MAP4K2Q12851 820 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 LAPTM5Q13571 262 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 NFE2L2Q16236 605 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 JAMLQ86YT9 394 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 CCDC103Q8IW40 242 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 OSBP2Q969R2 916 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 LIN37Q96GY3 246 aaPredicted RBP6.88□□□□□ -1.31
PTPRM-207ENST00000578571 MMP19Q99542 508 aa6.88□□□□□ -1.31
PTPRM-207ENST00000578571 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms