RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 SGSM2O43147 1006 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 OPA1O60313 960 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 TADA3O75528 432 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 DNAJC8O75937 253 aaPredicted RBP3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 SRGAP2CP0DJJ0 459 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 SDSP20132 328 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 GYS2P54840 703 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 GPR19Q15760 415 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 C21orf62-AS1Q17RA5 79 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 DALRD3Q5D0E6 543 aaKnown RBP3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 EGFLAMQ63HQ2 1017 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 TMEM132EQ6IEE7 984 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 MILR1Q7Z6M3 343 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 DDX53Q86TM3 631 aaKnown RBP3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 TRIM48Q8IWZ4 208 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 UHMK1Q8TAS1 419 aaKnown RBP3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 PIP4K2CQ8TBX8 421 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 PHOSPHO1Q8TCT1 267 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 ALG3Q92685 438 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 FAM84AQ96KN4 292 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 CELF4Q9BZC1 486 aaKnown RBP3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 MCOLN1Q9GZU1 580 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 TMX1Q9H3N1 280 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 SMOC1Q9H4F8 434 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 CATSPERZQ9NTU4 200 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 PALD1Q9ULE6 856 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 SIT1Q9Y3P8 196 aa3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 TNPO3Q9Y5L0 923 aaKnown RBP3.22□□□□□ -1.89
PTP4A1-204ENST00000578299 CCDC66A2RUB6 948 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 FARP2O94887 1054 aaPredicted RBP3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 CKMP06732 381 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 PYGMP11217 842 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 COL6A2P12110 1019 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 KCNA6P17658 529 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 CANXP27824 592 aaKnown RBP3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 DNM2P50570 870 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 LACTBP83111 547 aaPredicted RBP3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 ZNF200P98182 395 aaPredicted RBP3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 MESP2Q0VG99 397 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 TARBP2Q15633 366 aaKnown RBP3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 CRY1Q16526 586 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 TM4SF20Q53R12 229 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 ZCCHC8Q6NZY4 707 aaKnown RBP3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 UBE2R2Q712K3 238 aaPredicted RBP3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 LRRTM3Q86VH5 581 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 LDHDQ86WU2 507 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 DHX37Q8IY37 1157 aaKnown RBP3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 NLGN4XQ8N0W4 816 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 POU5F2Q8N7G0 328 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 MZB1Q8WU39 189 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 KCNN1Q92952 543 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 FMNL2Q96PY5 1086 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 PPP1R16BQ96T49 567 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 RNF38Q9H0F5 515 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 CNTD2Q9H8S5 307 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 SAMD15Q9P1V8 674 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 MYOTQ9UBF9 498 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 MBD1Q9UIS9 605 aaPredicted RBP3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 DSEQ9UL01 958 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 CBLCQ9ULV8 474 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 PCDHB4Q9Y5E5 795 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 HCFC2Q9Y5Z7 792 aa3.21□□□□□ -1.9
PTP4A1-204ENST00000578299 IRS2Q9Y4H2 1338 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 TCRBV5S2A0A599 114 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 ZNF561-AS1K7EIQ3 104 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 IRS4O14654 1257 aaPredicted RBP3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 SLC27A2O14975 620 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 N4BP3O15049 544 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 NKRFO15226 690 aaKnown RBP eCLIP3.2□□□□□ -1.92e-8■□□□□ 11.2
PTP4A1-204ENST00000578299 ASGR2P07307 311 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 TMEM253P0C7T8 217 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 NCAM1P13591 858 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 PDE6AP16499 860 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 PFKLP17858 780 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 POU3F2P20265 443 aaPredicted RBP3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 FBLN1P23142 703 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 GLDCP23378 1020 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 PMLP29590 882 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 CDR1P51861 262 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 EPHA5P54756 1037 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 DLG4P78352 724 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 ZNF460Q14592 562 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 CFAP100Q494V2 611 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 TMEM177Q53S58 311 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 FIGNQ5HY92 759 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 OGFOD2Q6N063 350 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 ABHD17CQ6PCB6 329 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 ETV3LQ6ZN32 361 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 ARHGAP36Q6ZRI8 547 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 EP400NLQ6ZTU2 488 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 SYDE1Q6ZW31 735 aaPredicted RBP3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 KCTD1Q719H9 257 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 OVCH1Q7RTY7 1134 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 OSTM1Q86WC4 334 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 AMIGO3Q86WK7 504 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 ANKLE2Q86XL3 938 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 MIB1Q86YT6 1006 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 PPM1KQ8N3J5 372 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 IGSF22Q8N9C0 903 aa3.2□□□□□ -1.9
PTP4A1-204ENST00000578299 BHLHE22Q8NFJ8 381 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms