RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 DNAJC19Q96DA6 116 aa30.91■■■□□ 2.54
LIMD2-203ENST00000578067 DUSP9Q99956 384 aaKnown RBP30.91■■■□□ 2.54
LIMD2-203ENST00000578067 SRRTQ9BXP5 876 aaKnown RBP30.91■■■□□ 2.54
LIMD2-203ENST00000578067 SLC38A10Q9HBR0 1119 aa30.91■■■□□ 2.54
LIMD2-203ENST00000578067 PICK1Q9NRD5 415 aa30.91■■■□□ 2.54
LIMD2-203ENST00000578067 N4BP3O15049 544 aa30.9■■■□□ 2.54
LIMD2-203ENST00000578067 RPA1P27694 616 aa30.9■■■□□ 2.54
LIMD2-203ENST00000578067 EPS15P42566 896 aa30.9■■■□□ 2.54
LIMD2-203ENST00000578067 CATSPER3Q86XQ3 398 aa30.9■■■□□ 2.54
LIMD2-203ENST00000578067 ZKSCAN4Q969J2 545 aaPredicted RBP30.9■■■□□ 2.54
LIMD2-203ENST00000578067 FLOT1O75955 427 aa30.9■■■□□ 2.54
LIMD2-203ENST00000578067 SSBP05455 408 aaKnown RBP eCLIP30.9■■■□□ 2.54
LIMD2-203ENST00000578067 EEF1GP26641 437 aaKnown RBP30.9■■■□□ 2.54
LIMD2-203ENST00000578067 EHHADHQ08426 723 aa30.9■■■□□ 2.54
LIMD2-203ENST00000578067 GOLGA8FQ08AF8 430 aa30.9■■■□□ 2.54
LIMD2-203ENST00000578067 GOLGA8DPQ0D2H9 430 aa30.9■■■□□ 2.54
LIMD2-203ENST00000578067 CCAR2Q8N163 923 aaKnown RBP30.9■■■□□ 2.54
LIMD2-203ENST00000578067 RPAP3Q9H6T3 665 aaPredicted RBP30.9■■■□□ 2.54
LIMD2-203ENST00000578067 TAB2Q9NYJ8 693 aa30.9■■■□□ 2.54
LIMD2-203ENST00000578067 PPP1R9AQ9ULJ8 1098 aa30.9■■■□□ 2.54
LIMD2-203ENST00000578067 DICER1Q9UPY3 1922 aaKnown RBP30.89■■■□□ 2.54
LIMD2-203ENST00000578067 PTPRAP18433 802 aa30.89■■■□□ 2.54
LIMD2-203ENST00000578067 HIRAP54198 1017 aaPredicted RBP30.89■■■□□ 2.54
LIMD2-203ENST00000578067 BACE1P56817 501 aa30.89■■■□□ 2.54
LIMD2-203ENST00000578067 ANKRD40Q6AI12 368 aa30.89■■■□□ 2.54
LIMD2-203ENST00000578067 CREBRFQ8IUR6 639 aa30.89■■■□□ 2.54
LIMD2-203ENST00000578067 CSGALNACT2Q8N6G5 542 aa30.89■■■□□ 2.54
LIMD2-203ENST00000578067 VPS16Q9H269 839 aa30.89■■■□□ 2.54
LIMD2-203ENST00000578067 UBXN2AP68543 259 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 MCF2L2Q86YR7 1114 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 TC2NQ8N9U0 490 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 ZNF280CQ8ND82 737 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 CLEC4DQ8WXI8 215 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 POTEFA5A3E0 1075 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 USP27XA6NNY8 438 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 POTEIP0CG38 1075 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 SPATA31C1P0DKV0 1188 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 CEP55Q53EZ4 464 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 POTEGQ6S5H5 508 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 POTEEQ6S8J3 1075 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 CPXCR1Q8N123 301 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 MAGEC2Q9UBF1 373 aaPredicted RBP30.88■■■□□ 2.53
LIMD2-203ENST00000578067 RABGAP1Q9Y3P9 1069 aa30.88■■■□□ 2.53
LIMD2-203ENST00000578067 GUF1Q8N442 669 aaKnown RBP30.87■■■□□ 2.53
LIMD2-203ENST00000578067 C16orf45Q96MC5 204 aaPredicted RBP30.87■■■□□ 2.53
LIMD2-203ENST00000578067 FHDC1Q9C0D6 1143 aaPredicted RBP30.87■■■□□ 2.53
LIMD2-203ENST00000578067 RAVER2Q9HCJ3 691 aaKnown RBP30.87■■■□□ 2.53
LIMD2-203ENST00000578067 ITIH6Q6UXX5 1313 aa30.87■■■□□ 2.53
LIMD2-203ENST00000578067 GHRHRQ02643 423 aa30.86■■■□□ 2.53
LIMD2-203ENST00000578067 E4F1Q66K89 784 aaPredicted RBP30.86■■■□□ 2.53
LIMD2-203ENST00000578067 CENPPQ6IPU0 288 aa30.86■■■□□ 2.53
LIMD2-203ENST00000578067 PPFIBP1Q86W92 1011 aa30.86■■■□□ 2.53
LIMD2-203ENST00000578067 GPBP1Q86WP2 473 aa30.86■■■□□ 2.53
LIMD2-203ENST00000578067 SLC5A5Q92911 643 aa30.86■■■□□ 2.53
LIMD2-203ENST00000578067 PANK4Q9NVE7 773 aa30.86■■■□□ 2.53
LIMD2-203ENST00000578067 PNMA2Q9UL42 364 aa30.86■■■□□ 2.53
LIMD2-203ENST00000578067 NFIBO00712 420 aa30.86■■■□□ 2.53
LIMD2-203ENST00000578067 ALAS1P13196 640 aa30.86■■■□□ 2.53
LIMD2-203ENST00000578067 ADKP55263 362 aaKnown RBP30.86■■■□□ 2.53
LIMD2-203ENST00000578067 POLR3CQ9BUI4 534 aaPredicted RBP30.86■■■□□ 2.53
LIMD2-203ENST00000578067 DNM3Q9UQ16 869 aa30.86■■■□□ 2.53
LIMD2-203ENST00000578067 CTDP1Q9Y5B0 961 aaPredicted RBP30.86■■■□□ 2.53
LIMD2-203ENST00000578067 AKR1B15C9JRZ8 316 aaPredicted RBP30.85■■■□□ 2.53
LIMD2-203ENST00000578067 ZBED4O75132 1171 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 FDX1P10109 184 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 COASYQ13057 564 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 KLRG1Q96E93 195 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 SEMA6BQ9H3T3 888 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 TRMT1Q9NXH9 659 aaKnown RBP30.85■■■□□ 2.53
LIMD2-203ENST00000578067 FZD1Q9UP38 647 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 PSMD10O75832 226 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 CYP11B2P19099 503 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 SLC12A3P55017 1021 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 LRCH2Q5VUJ6 765 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 OTOP1Q7RTM1 612 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 TMEM139Q8IV31 216 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 FAM114A1Q8IWE2 563 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 CCDC65Q8IXS2 484 aa30.85■■■□□ 2.53
LIMD2-203ENST00000578067 MEIS1O00470 390 aa30.84■■■□□ 2.53
LIMD2-203ENST00000578067 SETQ01105 290 aaPredicted RBP30.84■■■□□ 2.53
LIMD2-203ENST00000578067 SAMD3Q8N6K7 520 aa30.84■■■□□ 2.53
LIMD2-203ENST00000578067 PRIMPOLQ96LW4 560 aa30.84■■■□□ 2.53
LIMD2-203ENST00000578067 BAG1Q99933 345 aaPredicted RBP30.84■■■□□ 2.53
LIMD2-203ENST00000578067 EIF2AK1Q9BQI3 630 aaKnown RBP30.84■■■□□ 2.53
LIMD2-203ENST00000578067 MAP3K20Q9NYL2 800 aaKnown RBP30.84■■■□□ 2.53
LIMD2-203ENST00000578067 ZHX2Q9Y6X8 837 aa30.84■■■□□ 2.53
LIMD2-203ENST00000578067 TNNT1P13805 278 aa30.83■■■□□ 2.53
LIMD2-203ENST00000578067 SUPT20HL1Q3ZLR7 823 aa30.83■■■□□ 2.53
LIMD2-203ENST00000578067 KCTD17Q8N5Z5 321 aa30.83■■■□□ 2.53
LIMD2-203ENST00000578067 RPTORQ8N122 1335 aa30.83■■■□□ 2.53
LIMD2-203ENST00000578067 EML1O00423 815 aa30.83■■■□□ 2.53
LIMD2-203ENST00000578067 PSMC6P62333 389 aa30.83■■■□□ 2.53
LIMD2-203ENST00000578067 RBL2Q08999 1139 aa30.83■■■□□ 2.53
LIMD2-203ENST00000578067 PPP2R5CQ13362 524 aa30.83■■■□□ 2.53
LIMD2-203ENST00000578067 C12orf42Q96LP6 360 aa30.83■■■□□ 2.53
LIMD2-203ENST00000578067 COL20A1Q9P218 1284 aa30.83■■■□□ 2.53
LIMD2-203ENST00000578067 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP30.83■■■□□ 2.53
LIMD2-203ENST00000578067 PITPNM2Q9BZ72 1349 aa30.82■■■□□ 2.52
LIMD2-203ENST00000578067 ARHGAP6O43182 974 aa30.82■■■□□ 2.52
LIMD2-203ENST00000578067 STX10O60499 249 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms