RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 SH3GLB2Q9NR46 395 aa25.4■■□□□ 1.66
SMARCD2-206ENST00000577990 POLR3EQ9NVU0 708 aa25.4■■□□□ 1.66
SMARCD2-206ENST00000577990 VPS54Q9P1Q0 977 aa25.4■■□□□ 1.66
SMARCD2-206ENST00000577990 A0A0U1RQG5 324 aaPredicted RBP25.39■■□□□ 1.66
SMARCD2-206ENST00000577990 TGFB3P10600 412 aa25.39■■□□□ 1.66
SMARCD2-206ENST00000577990 GNA11P29992 359 aa25.39■■□□□ 1.66
SMARCD2-206ENST00000577990 ICAM3P32942 547 aa25.39■■□□□ 1.66
SMARCD2-206ENST00000577990 TDHQ8IZJ6 230 aa25.39■■□□□ 1.66
SMARCD2-206ENST00000577990 GTF3C6Q969F1 213 aa25.39■■□□□ 1.66
SMARCD2-206ENST00000577990 EMID1Q96A84 441 aaPredicted RBP25.39■■□□□ 1.66
SMARCD2-206ENST00000577990 PGBD1Q96JS3 809 aa25.39■■□□□ 1.66
SMARCD2-206ENST00000577990 PRDM5Q9NQX1 630 aaPredicted RBP25.39■■□□□ 1.66
SMARCD2-206ENST00000577990 TMEM260Q9NX78 707 aa25.39■■□□□ 1.66
SMARCD2-206ENST00000577990 FIBPO43427 364 aa25.38■■□□□ 1.65
SMARCD2-206ENST00000577990 MYL3P08590 195 aa25.38■■□□□ 1.65
SMARCD2-206ENST00000577990 UBA1P22314 1058 aaKnown RBP25.38■■□□□ 1.65
SMARCD2-206ENST00000577990 LAMC2Q13753 1193 aa25.38■■□□□ 1.65
SMARCD2-206ENST00000577990 NLRX1Q86UT6 975 aa25.38■■□□□ 1.65
SMARCD2-206ENST00000577990 DHX37Q8IY37 1157 aaKnown RBP25.38■■□□□ 1.65
SMARCD2-206ENST00000577990 NECAB1Q8N987 351 aa25.38■■□□□ 1.65
SMARCD2-206ENST00000577990 AFG1LQ8WV93 481 aa25.38■■□□□ 1.65
SMARCD2-206ENST00000577990 PRKAG2Q9UGJ0 569 aa25.38■■□□□ 1.65
SMARCD2-206ENST00000577990 STK36Q9NRP7 1315 aa25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 MYH7BA7E2Y1 1941 aa25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 SPATA31C2B4DYI2 1134 aa25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 KPNA6O60684 536 aa25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 PURAQ00577 322 aaKnown RBP25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 SP2Q02086 613 aa25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 TLE2Q04725 743 aa25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 SEMA3FQ13275 785 aa25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 CELF3Q5SZQ8 465 aaKnown RBP25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 JAKMIP3Q5VZ66 844 aa25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 REXO1Q8N1G1 1221 aaKnown RBP25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 BICD2Q8TD16 824 aa25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 LBHD1Q9BQE6 289 aaPredicted RBP25.37■■□□□ 1.65
SMARCD2-206ENST00000577990 ARVCFO00192 962 aa25.36■■□□□ 1.65
SMARCD2-206ENST00000577990 PQBP1O60828 265 aaKnown RBP25.36■■□□□ 1.65
SMARCD2-206ENST00000577990 CTDNEP1O95476 244 aa25.36■■□□□ 1.65
SMARCD2-206ENST00000577990 GGPS1O95749 300 aa25.36■■□□□ 1.65
SMARCD2-206ENST00000577990 MMP3P08254 477 aa25.36■■□□□ 1.65
SMARCD2-206ENST00000577990 MCTP2Q6DN12 878 aa25.36■■□□□ 1.65
SMARCD2-206ENST00000577990 GPRASP2Q96D09 838 aa25.36■■□□□ 1.65
SMARCD2-206ENST00000577990 MTG1Q9BT17 334 aaPredicted RBP25.36■■□□□ 1.65
SMARCD2-206ENST00000577990 PDLIM7Q9NR12 457 aa25.36■■□□□ 1.65
SMARCD2-206ENST00000577990 LIMCH1Q9UPQ0 1083 aa25.36■■□□□ 1.65
SMARCD2-206ENST00000577990 UBIAD1Q9Y5Z9 338 aa25.36■■□□□ 1.65
SMARCD2-206ENST00000577990 MROH7Q68CQ1 1323 aa25.36■■□□□ 1.65
SMARCD2-206ENST00000577990 ADAMTS3O15072 1205 aa25.35■■□□□ 1.65
SMARCD2-206ENST00000577990 SREBF1P36956 1147 aa25.35■■□□□ 1.65
SMARCD2-206ENST00000577990 CDK7P50613 346 aa25.35■■□□□ 1.65
SMARCD2-206ENST00000577990 NLRP5P59047 1200 aa25.35■■□□□ 1.65
SMARCD2-206ENST00000577990 RABEP1Q15276 862 aa25.35■■□□□ 1.65
SMARCD2-206ENST00000577990 MYSM1Q5VVJ2 828 aa25.35■■□□□ 1.65
SMARCD2-206ENST00000577990 ANKRD33Q7Z3H0 272 aa25.35■■□□□ 1.65
SMARCD2-206ENST00000577990 SH3RF1Q7Z6J0 888 aa25.35■■□□□ 1.65
SMARCD2-206ENST00000577990 FAM177A1Q8N128 213 aaPredicted RBP25.35■■□□□ 1.65
SMARCD2-206ENST00000577990 PPTC7Q8NI37 304 aa25.35■■□□□ 1.65
SMARCD2-206ENST00000577990 CDHR1Q96JP9 859 aa25.35■■□□□ 1.65
SMARCD2-206ENST00000577990 TOX2Q96NM4 488 aa25.35■■□□□ 1.65
SMARCD2-206ENST00000577990 SORBS3O60504 671 aa25.34■■□□□ 1.65
SMARCD2-206ENST00000577990 ITGB5P18084 799 aa25.34■■□□□ 1.65
SMARCD2-206ENST00000577990 PSMC6P62333 389 aa25.34■■□□□ 1.65
SMARCD2-206ENST00000577990 ITGA7Q13683 1181 aa25.34■■□□□ 1.65
SMARCD2-206ENST00000577990 NEDD9Q14511 834 aa25.34■■□□□ 1.65
SMARCD2-206ENST00000577990 SLC43A3Q8NBI5 491 aa25.34■■□□□ 1.65
SMARCD2-206ENST00000577990 SPATA33Q96N06 139 aa25.34■■□□□ 1.65
SMARCD2-206ENST00000577990 AIFM3Q96NN9 605 aa25.34■■□□□ 1.65
SMARCD2-206ENST00000577990 SEZ6LQ9BYH1 1024 aa25.34■■□□□ 1.65
SMARCD2-206ENST00000577990 MLXIPQ9HAP2 919 aa25.34■■□□□ 1.65
SMARCD2-206ENST00000577990 SCN10AQ9Y5Y9 1956 aa25.34■■□□□ 1.65
SMARCD2-206ENST00000577990 DGKDQ16760 1214 aa25.33■■□□□ 1.65
SMARCD2-206ENST00000577990 TBC1D32Q96NH3 1257 aa25.33■■□□□ 1.65
SMARCD2-206ENST00000577990 SENP7Q9BQF6 1050 aa25.33■■□□□ 1.65
SMARCD2-206ENST00000577990 JADE2Q9NQC1 790 aa25.33■■□□□ 1.65
SMARCD2-206ENST00000577990 ORC3Q9UBD5 711 aaPredicted RBP25.33■■□□□ 1.65
SMARCD2-206ENST00000577990 GRIN2DO15399 1336 aa25.33■■□□□ 1.64
SMARCD2-206ENST00000577990 TRIM43BA6NCK2 446 aa25.32■■□□□ 1.64
SMARCD2-206ENST00000577990 DCDC2CA8MYV0 355 aa25.32■■□□□ 1.64
SMARCD2-206ENST00000577990 CLTBP09497 229 aa25.32■■□□□ 1.64
SMARCD2-206ENST00000577990 ARHGAP4P98171 946 aa25.32■■□□□ 1.64
SMARCD2-206ENST00000577990 MTMR1Q13613 665 aa25.32■■□□□ 1.64
SMARCD2-206ENST00000577990 METTL7BQ6UX53 244 aa25.32■■□□□ 1.64
SMARCD2-206ENST00000577990 RASGRP4Q8TDF6 673 aa25.32■■□□□ 1.64
SMARCD2-206ENST00000577990 TRIM43Q96BQ3 446 aaPredicted RBP25.32■■□□□ 1.64
SMARCD2-206ENST00000577990 MXRA8Q9BRK3 442 aa25.32■■□□□ 1.64
SMARCD2-206ENST00000577990 PCDHA4Q9UN74 947 aa25.32■■□□□ 1.64
SMARCD2-206ENST00000577990 COL6A3P12111 3177 aa25.32■■□□□ 1.64
SMARCD2-206ENST00000577990 DTNBO60941 627 aa25.31■■□□□ 1.64
SMARCD2-206ENST00000577990 HOXD8P13378 290 aaPredicted RBP25.31■■□□□ 1.64
SMARCD2-206ENST00000577990 ST3GAL1Q11201 340 aa25.31■■□□□ 1.64
SMARCD2-206ENST00000577990 HSDL1Q3SXM5 330 aa25.31■■□□□ 1.64
SMARCD2-206ENST00000577990 LRIT3Q3SXY7 679 aa25.31■■□□□ 1.64
SMARCD2-206ENST00000577990 NSUN7Q8NE18 718 aaKnown RBP25.31■■□□□ 1.64
SMARCD2-206ENST00000577990 WASF1Q92558 559 aa25.31■■□□□ 1.64
SMARCD2-206ENST00000577990 BADQ92934 168 aa25.31■■□□□ 1.64
SMARCD2-206ENST00000577990 DOCK5Q9H7D0 1870 aa25.31■■□□□ 1.64
SMARCD2-206ENST00000577990 MAFGO15525 162 aa25.3■■□□□ 1.64
SMARCD2-206ENST00000577990 XBP1P17861 261 aa25.3■■□□□ 1.64
SMARCD2-206ENST00000577990 FAAP100Q0VG06 881 aa25.3■■□□□ 1.64
SMARCD2-206ENST00000577990 CEP55Q53EZ4 464 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms