RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 RALYLQ86SE5 291 aaKnown RBP16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 DHX38Q92620 1227 aaKnown RBP16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 SAMD11Q96NU1 681 aa16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 INSL6Q9Y581 213 aa16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 CHD9Q3L8U1 2897 aa16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 SCN5AQ14524 2016 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 EPOPA6NHQ4 379 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 RSPH10B2B2RC85 870 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 NBNO60934 754 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 RSPH10BP0C881 870 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 ERVK-21P61565 698 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 DEFB103AP81534 67 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 PGM5Q15124 567 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 PTPROQ16827 1216 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 MYSM1Q5VVJ2 828 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 VSIG10LQ86VR7 867 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 HOMER1Q86YM7 354 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 FAM122AQ96E09 287 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 HCN4Q9Y3Q4 1203 aa16.46■□□□□ 0.23
SMARCD2-205ENST00000577686 MYO9BQ13459 2157 aa16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 UBA1P22314 1058 aaKnown RBP16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 THPOP40225 353 aa16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 NEDD9Q14511 834 aa16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 ZNF618Q5T7W0 954 aa16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 SERINC5Q86VE9 423 aa16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 GDPD5Q8WTR4 605 aa16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 SEPT8Q92599 483 aa16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 ATP6V0A1Q93050 837 aa16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 MTMR8Q96EF0 704 aa16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 NECAB3Q96P71 396 aaPredicted RBP16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 CTAGE1Q96RT6 745 aa16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 ZNF215Q9UL58 517 aaPredicted RBP16.45■□□□□ 0.22
SMARCD2-205ENST00000577686 SPTBN5Q9NRC6 3674 aaKnown RBP16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 VCANP13611 3396 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 LCHNA4D1U4 455 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 LINC01553A4QN01 128 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 PALM3A6NDB9 673 aaPredicted RBP16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 H3BRB1 525 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 IFIT3O14879 490 aaKnown RBP16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 HOXA13P31271 388 aaPredicted RBP16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 GRM4Q14833 912 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 TRIM71Q2Q1W2 868 aaKnown RBP16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 CATIPQ7Z7H3 387 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 FCHSD1Q86WN1 690 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 STAG2Q8N3U4 1231 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 FBXO22Q8NEZ5 403 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 CUL5Q93034 780 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 USP26Q9BXU7 913 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 TUT1Q9H6E5 874 aaKnown RBP16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 MTUS1Q9ULD2 1270 aa16.44■□□□□ 0.22
SMARCD2-205ENST00000577686 PNMA6FA0A0J9YX94 578 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 ARHGEF15O94989 841 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 PLA2G5P39877 138 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 GPNMBQ14956 572 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 WTAPQ15007 396 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 SEC23AQ15436 765 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 HSDL1Q3SXM5 330 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 TIGD5Q53EQ6 642 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 KRT40Q6A162 431 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 FAM117BQ6P1L5 589 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 MYOCDQ8IZQ8 938 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 APBB2Q92870 758 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 KIAA1217Q5T5P2 1943 aa16.43■□□□□ 0.22
SMARCD2-205ENST00000577686 OPLAHO14841 1288 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 FIBPO43427 364 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 LPXNO60711 386 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 PUS10Q3MIT2 529 aaKnown RBP16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 TMEM31Q5JXX7 168 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 XRRA1Q6P2D8 792 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 METTL7BQ6UX53 244 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 GIMAP8Q8ND71 665 aaPredicted RBP16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 DBF4BQ8NFT6 615 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 NCOA7Q8NI08 942 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 PIGSQ96S52 555 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 YME1L1Q96TA2 773 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 C16orf70Q9BSU1 422 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 RIOX1Q9H6W3 641 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 UBE2ZQ9H832 354 aaPredicted RBP16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 SUGCTQ9HAC7 445 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 SEC63Q9UGP8 760 aaKnown RBP16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 FAM50BQ9Y247 325 aa16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 ARIH1Q9Y4X5 557 aaPredicted RBP16.42■□□□□ 0.22
SMARCD2-205ENST00000577686 COL4A4P53420 1690 aaPredicted RBP16.41■□□□□ 0.22
SMARCD2-205ENST00000577686 SORBS3O60504 671 aa16.41■□□□□ 0.22
SMARCD2-205ENST00000577686 PPP1R11O60927 126 aaPredicted RBP16.41■□□□□ 0.22
SMARCD2-205ENST00000577686 RGS20O76081 388 aa16.41■□□□□ 0.22
SMARCD2-205ENST00000577686 LGALS2P05162 132 aa16.41■□□□□ 0.22
SMARCD2-205ENST00000577686 SMIM10L2AP0DMW4 78 aa16.41■□□□□ 0.22
SMARCD2-205ENST00000577686 SMIM10L2BP0DMW5 78 aa16.41■□□□□ 0.22
SMARCD2-205ENST00000577686 KIF5BP33176 963 aa16.41■□□□□ 0.22
SMARCD2-205ENST00000577686 TMCO2Q7Z6W1 182 aaPredicted RBP16.41■□□□□ 0.22
SMARCD2-205ENST00000577686 NLRX1Q86UT6 975 aa16.41■□□□□ 0.22
SMARCD2-205ENST00000577686 ICAM3P32942 547 aa16.4■□□□□ 0.22
SMARCD2-205ENST00000577686 ZNF200P98182 395 aaPredicted RBP16.4■□□□□ 0.22
SMARCD2-205ENST00000577686 PLEKHG4Q58EX7 1191 aa16.4■□□□□ 0.22
SMARCD2-205ENST00000577686 TRAF7Q6Q0C0 670 aa16.4■□□□□ 0.22
SMARCD2-205ENST00000577686 CYB5R4Q7L1T6 521 aa16.4■□□□□ 0.22
SMARCD2-205ENST00000577686 RSPH3Q86UC2 560 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms