RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 VPS37CA5D8V6 355 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 XRCC5P13010 732 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 EDNRBP24530 442 aa12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ORC2Q13416 577 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 KCTD2Q14681 263 aa12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 NONOQ15233 471 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ZNF792Q3KQV3 632 aa12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 RILPL1Q5EBL4 403 aa12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 PPP4R3AQ6IN85 833 aa12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ANKRD35Q8N283 1001 aa12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 MSL3Q8N5Y2 521 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 MBOAT7Q96N66 472 aa12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 MMP19Q99542 508 aa12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 SENP6Q9GZR1 1112 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 HOMER2Q9NSB8 354 aa12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ZNF236Q9UL36 1845 aa12.69□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ZNFX1Q9P2E3 1918 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 CCDC194A0A1B0GVG4 234 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 SPDYE3A6NKU9 549 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 STAM2O75886 525 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 HOXA13P31271 388 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 TOB1P50616 345 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 RTP1P59025 263 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 FOXK2Q01167 660 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 UBE2SQ16763 222 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 MYSM1Q5VVJ2 828 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 JAKMIP3Q5VZ66 844 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 MAMDC4Q6UXC1 1216 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 NSMFQ6X4W1 530 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 SLC30A10Q6XR72 485 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 VSIG10LQ86VR7 867 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 NSUN6Q8TEA1 469 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 PPM1EQ8WY54 764 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 BADQ92934 168 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 FGD4Q96M96 766 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 TAAR1Q96RJ0 339 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 NAP1L4Q99733 375 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ANO3Q9BYT9 981 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 EHMT1Q9H9B1 1298 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 PXMP2Q9NR77 195 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 TMEM260Q9NX78 707 aa12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ADD3Q9UEY8 706 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-204ENST00000577664 SOWAHBA6NEL2 793 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 B4DLN1 442 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 MAFGO15525 162 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ADORA2AP29274 412 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 CACNB2Q08289 660 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 PCNX4Q63HM2 1172 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 MCTP1Q6DN14 999 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 PIK3AP1Q6ZUJ8 805 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 NIPA1Q7RTP0 329 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 NEK8Q86SG6 692 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 TRMT44Q8IYL2 757 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 RASGRP4Q8TDF6 673 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 TBCKQ8TEA7 893 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 SOCS4Q8WXH5 440 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 RMDN3Q96TC7 470 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 PDCD2LQ9BRP1 358 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 SLC5A4Q9NY91 659 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 IVNS1ABPQ9Y6Y0 642 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 CHD9Q3L8U1 2897 aa12.67□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ASTN1O14525 1302 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 MYO9BQ13459 2157 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 REV3LO60673 3130 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 COBLO75128 1261 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 GCFC2P16383 781 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 FOSBP53539 338 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ARHGAP4P98171 946 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 CNTN2Q02246 1040 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 NHLH1Q02575 133 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 MAP2K5Q13163 448 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 PGM5Q15124 567 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 Q4G0T1 1027 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 FERMT3Q86UX7 667 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 FCHSD1Q86WN1 690 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 CCAR1Q8IX12 1150 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 RNPC3Q96LT9 517 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 POLR3EQ9NVU0 708 aa12.66□□□□□ -0.38
CDK5RAP3-204ENST00000577664 LCTP09848 1927 aa12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ASB14A6NK59 587 aa12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 MEIS1O00470 390 aa12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 EIF3JO75822 258 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 NR3C2P08235 984 aa12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 CCND3P30281 292 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 NASPP49321 788 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ALDH5A1P51649 535 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 MRPS9P82933 396 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 GNL2Q13823 731 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ADGRE1Q14246 886 aa12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 SNX17Q15036 470 aa12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 INF2Q27J81 1249 aa12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 AAK1Q2M2I8 961 aa12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 ARHGEF16Q5VV41 709 aa12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 OLFML2BQ68BL8 750 aa12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 C4orf32Q8N8J7 132 aa12.65□□□□□ -0.38
CDK5RAP3-204ENST00000577664 TIFAQ96CG3 184 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms