RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 NR3C2P08235 984 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 MX1P20591 662 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 CDC37Q16543 378 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 PTPROQ16827 1216 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 ADGRF4Q8IZF3 695 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 TOP1MTQ969P6 601 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 EMID1Q96A84 441 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 PABPC5Q96DU9 382 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 ZFP91Q96JP5 570 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 KATNAL1Q9BW62 490 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 HELLSQ9NRZ9 838 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 PCDHB15Q9Y5E8 787 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 MRVI1Q9Y6F6 885 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 MYO7AQ13402 2215 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 MYH7BA7E2Y1 1941 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 PPFIA4O75335 1185 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 HSPD1P10809 573 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 MYCLP12524 364 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 LTBRP36941 435 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 SP2Q02086 613 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 ZP2Q05996 745 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 HSDL1Q3SXM5 330 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 MCMDC2Q4G0Z9 681 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 PLEKHG4Q58EX7 1191 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 GPATCH4Q5T3I0 446 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 MYSM1Q5VVJ2 828 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 MFSD6Q6ZSS7 791 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 HFE2Q6ZVN8 426 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 MCF2L2Q86YR7 1114 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 TMEM192Q8IY95 271 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 PPTC7Q8NI37 304 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 YME1L1Q96TA2 773 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 CLDND1Q9NY35 253 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 ABCB11O95342 1321 aa11.83□□□□□ -0.52
NPLOC4-220ENST00000576940 KIAA1217Q5T5P2 1943 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 A0A0D9SFI3 127 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 TREHO43280 583 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 RGS20O76081 388 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 CFBP00751 764 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 IRS1P35568 1242 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 DLX2Q07687 328 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 CLUL1Q15846 466 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 QRICH1Q2TAL8 776 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 TIGD5Q53EQ6 642 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 ZNF589Q86UQ0 364 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 SERINC5Q86VE9 423 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 TBC1D10CQ8IV04 446 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 EVI5LQ96CN4 794 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 SAMD11Q96NU1 681 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 PHOX2BQ99453 314 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 C16orf70Q9BSU1 422 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 NSUN3Q9H649 340 aaKnown RBP11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 BCAS3Q9H6U6 928 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 PXMP2Q9NR77 195 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 EMSYQ7Z589 1322 aa11.82□□□□□ -0.52
NPLOC4-220ENST00000576940 MICAL3Q7RTP6 2002 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 GGPS1O95749 300 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 CTSHP09668 335 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 CELF3Q5SZQ8 465 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 FBXO11Q86XK2 927 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 DGKHQ86XP1 1220 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 ADHFE1Q8IWW8 467 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 GPKOWQ92917 476 aaPredicted RBP eCLIP11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 ATP6V0A1Q93050 837 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 SPATA33Q96N06 139 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 MAF1Q9H063 256 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 RNPEPQ9H4A4 650 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 JMJD4Q9H9V9 463 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 PRKAG3Q9UGI9 489 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 MRPL11Q9Y3B7 192 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 SALL3Q9BXA9 1300 aa11.81□□□□□ -0.52
NPLOC4-220ENST00000576940 TRIOO75962 3097 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 C17orf102A2RUQ5 167 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 OPLAHO14841 1288 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 DHX16O60231 1041 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 CSPG5O95196 566 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 HOXD8P13378 290 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 NMIQ13287 307 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 COL19A1Q14993 1142 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 RPAINQ86UA6 219 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 PNMA1Q8ND90 353 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 SEPT8Q92599 483 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 ESR2Q92731 530 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 KCNH6Q9H252 994 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 IGFLR1Q9H665 355 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 MUTYHQ9UIF7 546 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 FAM50BQ9Y247 325 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 NEDD4P46934 1319 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 USP34Q70CQ2 3546 aa11.8□□□□□ -0.52
NPLOC4-220ENST00000576940 H3BRB1 525 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 GRM6O15303 877 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 MBTPS2O43462 519 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 SMIM10L2AP0DMW4 78 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 SMIM10L2BP0DMW5 78 aa11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 HOXA13P31271 388 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 GTF2F1P35269 517 aaKnown RBP eCLIP11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 SMAD2Q15796 467 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-220ENST00000576940 CTC1Q2NKJ3 1217 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms