RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PARP1P09874 1014 aaKnown RBP13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 KCNA5P22460 613 aa13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 PTPROQ16827 1216 aa13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 TCTN1Q2MV58 587 aa13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 TRIM71Q2Q1W2 868 aaKnown RBP13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 RILPL2Q969X0 211 aa13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 SAMD11Q96NU1 681 aa13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 C11orf16Q9NQ32 467 aa13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 MICAL3Q7RTP6 2002 aa13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 HOXD8P13378 290 aaPredicted RBP13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 THPOP40225 353 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 MBTPS1Q14703 1052 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 PUS10Q3MIT2 529 aaKnown RBP13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 MYSM1Q5VVJ2 828 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 TRAF7Q6Q0C0 670 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 SERINC5Q86VE9 423 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 FAM178BQ8IXR5 827 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 MYOCDQ8IZQ8 938 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 GJD3Q8N144 294 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 ANKS1AQ92625 1134 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 MRPL38Q96DV4 380 aaKnown RBP13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 SPATA33Q96N06 139 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 ZSCAN10Q96SZ4 725 aaPredicted RBP13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 C17orf80Q9BSJ5 609 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 AMNQ9BXJ7 453 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 JMJD4Q9H9V9 463 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 VAT1LQ9HCJ6 419 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 CD320Q9NPF0 282 aa13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 MAP3K20Q9NYL2 800 aaKnown RBP13.56□□□□□ -0.24
CTDNEP1-212ENST00000576613 PRR33A8MZF0 331 aa13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 RSPH10B2B2RC85 870 aa13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 RSPH10BP0C881 870 aa13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 MYCLP12524 364 aaPredicted RBP13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 ALADP13716 330 aa13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 SSTR3P32745 418 aaPredicted RBP13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 HSD17B4P51659 736 aa13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 HTRA4P83105 476 aaPredicted RBP13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 TIGD5Q53EQ6 642 aa13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 CELF3Q5SZQ8 465 aaKnown RBP13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 PTCRAQ6ISU1 281 aaPredicted RBP13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 ENAHQ8N8S7 591 aaPredicted RBP13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 DBF4BQ8NFT6 615 aa13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 WNT8BQ93098 351 aa13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 UBAC1Q9BSL1 405 aa13.55□□□□□ -0.24
CTDNEP1-212ENST00000576613 COL4A6Q14031 1691 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 B4E1Z4 1266 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 GGPS1O95749 300 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 TGFB3P10600 412 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 SDSP20132 328 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 ZNF200P98182 395 aaPredicted RBP13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 GHRHRQ02643 423 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 TRAF1Q13077 416 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 HDAC1Q13547 482 aaPredicted RBP13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 HSDL1Q3SXM5 330 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 PLEKHG4Q58EX7 1191 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 STOX1Q6ZVD7 989 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 SAMD3Q8N6K7 520 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 ATP6V0A1Q93050 837 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 YME1L1Q96TA2 773 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 PDCD2LQ9BRP1 358 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 FAM50BQ9Y247 325 aa13.54□□□□□ -0.24
CTDNEP1-212ENST00000576613 C17orf102A2RUQ5 167 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 GRXCR2A6NFK2 248 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 CAND2O75155 1236 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 IL9P15248 144 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 UBA1P22314 1058 aaKnown RBP13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 CCND2P30279 289 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 MKRN4PQ13434 485 aaPredicted RBP13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 IMMTQ16891 758 aaKnown RBP13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 CSPP1Q1MSJ5 1256 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 EPC2Q52LR7 807 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 BANK1Q8NDB2 785 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 SEPT8Q92599 483 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 C16orf70Q9BSU1 422 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 KRT23Q9C075 422 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 CNNM2Q9H8M5 875 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 MLXIPQ9HAP2 919 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 ZSWIM5Q9P217 1185 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 PCDHA1Q9Y5I3 950 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 RALGAPA2Q2PPJ7 1873 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 NLRC5Q86WI3 1866 aa13.53□□□□□ -0.24
CTDNEP1-212ENST00000576613 H3BNC9 293 aa13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 H3BRB1 525 aa13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 NOP56O00567 594 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 OPLAHO14841 1288 aa13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 ZBTB5O15062 677 aa13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 SORBS3O60504 671 aa13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 RGS20O76081 388 aa13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 HIC1Q14526 733 aa13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 PGM5Q15124 567 aa13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 IFIT1BQ5T764 474 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 CWC27Q6UX04 472 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 VSIG10LQ86VR7 867 aa13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 NEK9Q8TD19 979 aa13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 LNPKQ9C0E8 428 aa13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 TUT1Q9H6E5 874 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-212ENST00000576613 DIAPH3Q9NSV4 1193 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms