RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 EMID1Q96A84 441 aaPredicted RBP23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 TOX2Q96NM4 488 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 ANO3Q9BYT9 981 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 ZMYND12Q9H0C1 365 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 TMEM260Q9NX78 707 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 CDKL5O76039 1030 aa23.7■■□□□ 1.38
HCFC1R1-208ENST00000575214 ICAM3P32942 547 aa23.7■■□□□ 1.38
HCFC1R1-208ENST00000575214 MAGEA10P43363 369 aaPredicted RBP23.7■■□□□ 1.38
HCFC1R1-208ENST00000575214 MDM2Q00987 491 aaPredicted RBP23.7■■□□□ 1.38
HCFC1R1-208ENST00000575214 SP2Q02086 613 aa23.7■■□□□ 1.38
HCFC1R1-208ENST00000575214 CELF3Q5SZQ8 465 aaKnown RBP23.7■■□□□ 1.38
HCFC1R1-208ENST00000575214 SH3RF1Q7Z6J0 888 aa23.7■■□□□ 1.38
HCFC1R1-208ENST00000575214 C22orf23Q9BZE7 217 aa23.7■■□□□ 1.38
HCFC1R1-208ENST00000575214 MLXIPQ9HAP2 919 aa23.7■■□□□ 1.38
HCFC1R1-208ENST00000575214 VPS54Q9P1Q0 977 aa23.7■■□□□ 1.38
HCFC1R1-208ENST00000575214 SPATA31C2B4DYI2 1134 aa23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 DEXIO95424 95 aa23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 GNA11P29992 359 aa23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 CLK2P49760 499 aaKnown RBP23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 SEMA3FQ13275 785 aa23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 MYSM1Q5VVJ2 828 aa23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 JAKMIP3Q5VZ66 844 aa23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 SLC43A3Q8NBI5 491 aa23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 PPTC7Q8NI37 304 aa23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 SPATA33Q96N06 139 aa23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 LBHD1Q9BQE6 289 aaPredicted RBP23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 TMEM39AQ9NV64 488 aa23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 GRIN2DO15399 1336 aa23.69■■□□□ 1.38
HCFC1R1-208ENST00000575214 TRIM43BA6NCK2 446 aa23.68■■□□□ 1.38
HCFC1R1-208ENST00000575214 TLR3O15455 904 aaKnown RBP23.68■■□□□ 1.38
HCFC1R1-208ENST00000575214 FAAP100Q0VG06 881 aa23.68■■□□□ 1.38
HCFC1R1-208ENST00000575214 NEDD9Q14511 834 aa23.68■■□□□ 1.38
HCFC1R1-208ENST00000575214 DGKDQ16760 1214 aa23.68■■□□□ 1.38
HCFC1R1-208ENST00000575214 TRIM43Q96BQ3 446 aaPredicted RBP23.68■■□□□ 1.38
HCFC1R1-208ENST00000575214 GPRASP2Q96D09 838 aa23.68■■□□□ 1.38
HCFC1R1-208ENST00000575214 GDF15Q99988 308 aa23.68■■□□□ 1.38
HCFC1R1-208ENST00000575214 SEZ6LQ9BYH1 1024 aa23.68■■□□□ 1.38
HCFC1R1-208ENST00000575214 RANBP2P49792 3224 aaKnown RBP23.67■■□□□ 1.38
HCFC1R1-208ENST00000575214 CHMP4BP1P59074 171 aa23.67■■□□□ 1.38
HCFC1R1-208ENST00000575214 ME3Q16798 604 aa23.67■■□□□ 1.38
HCFC1R1-208ENST00000575214 FAM126BQ8IXS8 530 aa23.67■■□□□ 1.38
HCFC1R1-208ENST00000575214 REXO1Q8N1G1 1221 aaKnown RBP23.67■■□□□ 1.38
HCFC1R1-208ENST00000575214 BICD2Q8TD16 824 aa23.67■■□□□ 1.38
HCFC1R1-208ENST00000575214 CDHR1Q96JP9 859 aa23.67■■□□□ 1.38
HCFC1R1-208ENST00000575214 UPF2Q9HAU5 1272 aaKnown RBP23.67■■□□□ 1.38
HCFC1R1-208ENST00000575214 SH3GLB2Q9NR46 395 aa23.67■■□□□ 1.38
HCFC1R1-208ENST00000575214 GTF3C3Q9Y5Q9 886 aa23.67■■□□□ 1.38
HCFC1R1-208ENST00000575214 UBIAD1Q9Y5Z9 338 aa23.67■■□□□ 1.38
HCFC1R1-208ENST00000575214 LARGE1O95461 756 aa23.66■■□□□ 1.38
HCFC1R1-208ENST00000575214 ITGB5P18084 799 aa23.66■■□□□ 1.38
HCFC1R1-208ENST00000575214 NLRP5P59047 1200 aa23.66■■□□□ 1.38
HCFC1R1-208ENST00000575214 HSDL1Q3SXM5 330 aa23.66■■□□□ 1.38
HCFC1R1-208ENST00000575214 FAM47CQ5HY64 1035 aa23.66■■□□□ 1.38
HCFC1R1-208ENST00000575214 CYFIP1Q7L576 1253 aa23.66■■□□□ 1.38
HCFC1R1-208ENST00000575214 NECAB1Q8N987 351 aa23.66■■□□□ 1.38
HCFC1R1-208ENST00000575214 ADAMTS3O15072 1205 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 RAG1P15918 1043 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 SREBF1P36956 1147 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 MTMR1Q13613 665 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 NBPF20Q3BBV1 942 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 MCTP2Q6DN12 878 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 PRO3102Q9H379 93 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 BCAS3Q9H6U6 928 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 JADE2Q9NQC1 790 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 NOP56O00567 594 aaKnown RBP23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 KIAA0355O15063 1070 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 ZNF286BP0CG31 522 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 RBM25P49756 843 aaKnown RBP23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 HABP4Q5JVS0 413 aaKnown RBP23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 METTL7BQ6UX53 244 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 RASGRP4Q8TDF6 673 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 PPP1R13LQ8WUF5 828 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 GTF3C6Q969F1 213 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 AIFM3Q96NN9 605 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 SENP7Q9BQF6 1050 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 MXRA8Q9BRK3 442 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 UBE2OQ9C0C9 1292 aaKnown RBP23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 TRIOBPQ9H2D6 2365 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 PKD2L1Q9P0L9 805 aa23.65■■□□□ 1.38
HCFC1R1-208ENST00000575214 STK36Q9NRP7 1315 aa23.64■■□□□ 1.37
HCFC1R1-208ENST00000575214 B4GALT4O60513 344 aa23.64■■□□□ 1.37
HCFC1R1-208ENST00000575214 DTNBO60941 627 aa23.64■■□□□ 1.37
HCFC1R1-208ENST00000575214 SLC34A2O95436 690 aa23.64■■□□□ 1.37
HCFC1R1-208ENST00000575214 CD4P01730 458 aa23.64■■□□□ 1.37
HCFC1R1-208ENST00000575214 ZNF76P36508 570 aa23.64■■□□□ 1.37
HCFC1R1-208ENST00000575214 ARHGAP4P98171 946 aa23.64■■□□□ 1.37
HCFC1R1-208ENST00000575214 GIMAP8Q8ND71 665 aaPredicted RBP23.64■■□□□ 1.37
HCFC1R1-208ENST00000575214 BADQ92934 168 aa23.64■■□□□ 1.37
HCFC1R1-208ENST00000575214 KIF2CQ99661 725 aa23.64■■□□□ 1.37
HCFC1R1-208ENST00000575214 TBX21Q9UL17 535 aa23.64■■□□□ 1.37
HCFC1R1-208ENST00000575214 PPFIA4O75335 1185 aa23.63■■□□□ 1.37
HCFC1R1-208ENST00000575214 CTDNEP1O95476 244 aa23.63■■□□□ 1.37
HCFC1R1-208ENST00000575214 ITGB8P26012 769 aa23.63■■□□□ 1.37
HCFC1R1-208ENST00000575214 BMP8BP34820 402 aa23.63■■□□□ 1.37
HCFC1R1-208ENST00000575214 SP4Q02446 784 aa23.63■■□□□ 1.37
HCFC1R1-208ENST00000575214 CEP55Q53EZ4 464 aa23.63■■□□□ 1.37
HCFC1R1-208ENST00000575214 NFRKBQ6P4R8 1299 aa23.63■■□□□ 1.37
HCFC1R1-208ENST00000575214 KAT2BQ92831 832 aa23.63■■□□□ 1.37
HCFC1R1-208ENST00000575214 KATNAL1Q9BW62 490 aa23.63■■□□□ 1.37
HCFC1R1-208ENST00000575214 TRPV6Q9H1D0 765 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms