RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 PGBD1Q96JS3 809 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 TOX2Q96NM4 488 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 AIFM3Q96NN9 605 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 ZMYND12Q9H0C1 365 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 TMEM260Q9NX78 707 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 SEC63Q9UGP8 760 aaKnown RBP9.99□□□□□ -0.81
SMG6-216ENST00000575176 ATP11BQ9Y2G3 1177 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 UBIAD1Q9Y5Z9 338 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 UMODL1Q5DID0 1318 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 MYH9P35579 1960 aaKnown RBP9.99□□□□□ -0.81
SMG6-216ENST00000575176 COL4A6Q14031 1691 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 IGLV3-22A0A075B6J6 115 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 A0A0U1RQG5 324 aaPredicted RBP9.98□□□□□ -0.81
SMG6-216ENST00000575176 SPATA31C2B4DYI2 1134 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 B4GALT4O60513 344 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 PFKFB2O60825 505 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 PQBP1O60828 265 aaKnown RBP9.98□□□□□ -0.81
SMG6-216ENST00000575176 ATP9AO75110 1047 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 CLTBP09497 229 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 FDPSP14324 419 aaKnown RBP9.98□□□□□ -0.81
SMG6-216ENST00000575176 CCND2P30279 289 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 SREBF1P36956 1147 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 RBM25P49756 843 aaKnown RBP9.98□□□□□ -0.81
SMG6-216ENST00000575176 CCT2P78371 535 aaKnown RBP9.98□□□□□ -0.81
SMG6-216ENST00000575176 TRAF1Q13077 416 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 ME3Q16798 604 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 PPTC7Q8NI37 304 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 CYP2W1Q8TAV3 490 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 LENG9Q96B70 501 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 ANO3Q9BYT9 981 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 WNT8AQ9H1J5 351 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 PSTPIP2Q9H939 334 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 PDRG1Q9NUG6 133 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 NR2E3Q9Y5X4 410 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 STK36Q9NRP7 1315 aa9.98□□□□□ -0.81
SMG6-216ENST00000575176 ATG2AQ2TAZ0 1938 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 COL4A4P53420 1690 aaPredicted RBP9.97□□□□□ -0.81
SMG6-216ENST00000575176 STAM2O75886 525 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 GGPS1O95749 300 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 GH1P01241 217 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 MYCNP04198 464 aaPredicted RBP9.97□□□□□ -0.81
SMG6-216ENST00000575176 ZNF286BP0CG31 522 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 MYCLP12524 364 aaPredicted RBP9.97□□□□□ -0.81
SMG6-216ENST00000575176 CPT1AP50416 773 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 NAPAP54920 295 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 ITGB3BPQ13352 177 aaPredicted RBP9.97□□□□□ -0.81
SMG6-216ENST00000575176 ITGA7Q13683 1181 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 CELF3Q5SZQ8 465 aaKnown RBP9.97□□□□□ -0.81
SMG6-216ENST00000575176 SESTD1Q86VW0 696 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 DHX38Q92620 1227 aaKnown RBP9.97□□□□□ -0.81
SMG6-216ENST00000575176 CUL5Q93034 780 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 WNT8BQ93098 351 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 GTF3C6Q969F1 213 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 GLT1D1Q96MS3 346 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 C16orf70Q9BSU1 422 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 PCDHA6Q9UN73 950 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 PCDHA8Q9Y5H6 950 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 MRVI1Q9Y6F6 885 aa9.97□□□□□ -0.81
SMG6-216ENST00000575176 KAT6AQ92794 2004 aa9.96□□□□□ -0.81
SMG6-216ENST00000575176 A0A1W2PPC1 479 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 FAM86B1E9PN63 330 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 FIBPO43427 364 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 CABYRO75952 493 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 FAM86B2P0C5J1 330 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 ADCY7P51828 1080 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 MDM2Q00987 491 aaPredicted RBP9.96□□□□□ -0.82
SMG6-216ENST00000575176 AP3B2Q13367 1082 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 C9orf50Q5SZB4 431 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 XRRA1Q6P2D8 792 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 TRAF7Q6Q0C0 670 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 METTL7BQ6UX53 244 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 SYNE3Q6ZMZ3 975 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 C16orf59Q7L2K0 433 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 DAGLBQ8NCG7 672 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 SMARCC2Q8TAQ2 1214 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 RASGRP4Q8TDF6 673 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 GPRASP2Q96D09 838 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 GPR20Q99678 358 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 MTG1Q9BT17 334 aaPredicted RBP9.96□□□□□ -0.82
SMG6-216ENST00000575176 NOC4LQ9BVI4 516 aaKnown RBP9.96□□□□□ -0.82
SMG6-216ENST00000575176 SLC26A6Q9BXS9 759 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 AP5M1Q9H0R1 490 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 TRPV6Q9H1D0 765 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 SPC25Q9HBM1 224 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 GJB4Q9NTQ9 266 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 TRMT13Q9NUP7 481 aaKnown RBP9.96□□□□□ -0.82
SMG6-216ENST00000575176 VPS54Q9P1Q0 977 aa9.96□□□□□ -0.82
SMG6-216ENST00000575176 MYH15Q9Y2K3 1946 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 XIRP2A4UGR9 3374 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 CCDC196A0A1B0GTZ2 297 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 SMCO2A6NFE2 343 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 CD2BP2O95400 341 aaKnown RBP9.95□□□□□ -0.82
SMG6-216ENST00000575176 CYP3A4P08684 503 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 TGFB3P10600 412 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 RBL2Q08999 1139 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 STK3Q13188 491 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 GPNMBQ14956 572 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 TRIM71Q2Q1W2 868 aaKnown RBP9.95□□□□□ -0.82
SMG6-216ENST00000575176 NBPF20Q3BBV1 942 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 RASIP1Q5U651 963 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms