RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 ZBED2Q9BTP6 218 aa19.47■□□□□ 0.71
TVP23A-209ENST00000575135 KATNAL1Q9BW62 490 aa19.47■□□□□ 0.71
TVP23A-209ENST00000575135 MAD2L2Q9UI95 211 aa19.47■□□□□ 0.71
TVP23A-209ENST00000575135 PCDHA1Q9Y5I3 950 aa19.47■□□□□ 0.71
TVP23A-209ENST00000575135 HAS3O00219 553 aa19.46■□□□□ 0.71
TVP23A-209ENST00000575135 ZBTB5O15062 677 aa19.46■□□□□ 0.71
TVP23A-209ENST00000575135 SORBS3O60504 671 aa19.46■□□□□ 0.71
TVP23A-209ENST00000575135 PARNO95453 639 aaKnown RBP19.46■□□□□ 0.71
TVP23A-209ENST00000575135 ZNF200P98182 395 aaPredicted RBP19.46■□□□□ 0.71
TVP23A-209ENST00000575135 MYSM1Q5VVJ2 828 aa19.46■□□□□ 0.71
TVP23A-209ENST00000575135 EXOC6Q8TAG9 804 aa19.46■□□□□ 0.71
TVP23A-209ENST00000575135 WNT8BQ93098 351 aa19.46■□□□□ 0.71
TVP23A-209ENST00000575135 BAZ2BQ9UIF8 2168 aaKnown RBP19.45■□□□□ 0.7
TVP23A-209ENST00000575135 PALM3A6NDB9 673 aaPredicted RBP19.45■□□□□ 0.7
TVP23A-209ENST00000575135 LPXNO60711 386 aa19.45■□□□□ 0.7
TVP23A-209ENST00000575135 PPFIA4O75335 1185 aa19.45■□□□□ 0.7
TVP23A-209ENST00000575135 HOXD8P13378 290 aaPredicted RBP19.45■□□□□ 0.7
TVP23A-209ENST00000575135 PTK7Q13308 1070 aa19.45■□□□□ 0.7
TVP23A-209ENST00000575135 HIC1Q14526 733 aa19.45■□□□□ 0.7
TVP23A-209ENST00000575135 SLC35G1Q2M3R5 365 aa19.45■□□□□ 0.7
TVP23A-209ENST00000575135 TRIM71Q2Q1W2 868 aaKnown RBP19.45■□□□□ 0.7
TVP23A-209ENST00000575135 CELF3Q5SZQ8 465 aaKnown RBP19.45■□□□□ 0.7
TVP23A-209ENST00000575135 TRAF7Q6Q0C0 670 aa19.45■□□□□ 0.7
TVP23A-209ENST00000575135 VSIG10LQ86VR7 867 aa19.45■□□□□ 0.7
TVP23A-209ENST00000575135 IL31RAQ8NI17 732 aa19.45■□□□□ 0.7
TVP23A-209ENST00000575135 SPATA33Q96N06 139 aa19.45■□□□□ 0.7
TVP23A-209ENST00000575135 MAP3K20Q9NYL2 800 aaKnown RBP19.45■□□□□ 0.7
TVP23A-209ENST00000575135 RAPGEFL1Q9UHV5 662 aa19.45■□□□□ 0.7
TVP23A-209ENST00000575135 ABHD14A-ACY1A0A1B0GW23 586 aa19.44■□□□□ 0.7
TVP23A-209ENST00000575135 SP2Q02086 613 aa19.44■□□□□ 0.7
TVP23A-209ENST00000575135 PGM5Q15124 567 aa19.44■□□□□ 0.7
TVP23A-209ENST00000575135 HSDL1Q3SXM5 330 aa19.44■□□□□ 0.7
TVP23A-209ENST00000575135 ZNF618Q5T7W0 954 aa19.44■□□□□ 0.7
TVP23A-209ENST00000575135 KCNV1Q6PIU1 500 aa19.44■□□□□ 0.7
TVP23A-209ENST00000575135 HOMER1Q86YM7 354 aa19.44■□□□□ 0.7
TVP23A-209ENST00000575135 ZFP91Q96JP5 570 aaPredicted RBP19.44■□□□□ 0.7
TVP23A-209ENST00000575135 COG5Q9UP83 839 aa19.44■□□□□ 0.7
TVP23A-209ENST00000575135 GJB5O95377 273 aa19.43■□□□□ 0.7
TVP23A-209ENST00000575135 GGPS1O95749 300 aa19.43■□□□□ 0.7
TVP23A-209ENST00000575135 IKBKEQ14164 716 aa19.43■□□□□ 0.7
TVP23A-209ENST00000575135 MBTPS1Q14703 1052 aa19.43■□□□□ 0.7
TVP23A-209ENST00000575135 PIGSQ96S52 555 aa19.43■□□□□ 0.7
TVP23A-209ENST00000575135 RAD9AQ99638 391 aa19.43■□□□□ 0.7
TVP23A-209ENST00000575135 COL4A4P53420 1690 aaPredicted RBP19.43■□□□□ 0.7
TVP23A-209ENST00000575135 BRWD1Q9NSI6 2320 aa19.42■□□□□ 0.7
TVP23A-209ENST00000575135 UBA1P22314 1058 aaKnown RBP19.42■□□□□ 0.7
TVP23A-209ENST00000575135 GRM4Q14833 912 aa19.42■□□□□ 0.7
TVP23A-209ENST00000575135 FCHSD1Q86WN1 690 aa19.42■□□□□ 0.7
TVP23A-209ENST00000575135 SAMD3Q8N6K7 520 aa19.42■□□□□ 0.7
TVP23A-209ENST00000575135 GDPD5Q8WTR4 605 aa19.42■□□□□ 0.7
TVP23A-209ENST00000575135 GPKOWQ92917 476 aaPredicted RBP eCLIP19.42■□□□□ 0.7
TVP23A-209ENST00000575135 HLA-CQ95604 372 aa19.42■□□□□ 0.7
TVP23A-209ENST00000575135 SENP2Q9HC62 589 aa19.42■□□□□ 0.7
TVP23A-209ENST00000575135 MTUS1Q9ULD2 1270 aa19.42■□□□□ 0.7
TVP23A-209ENST00000575135 GCOM1H8Y6P7 765 aaPredicted RBP19.41■□□□□ 0.7
TVP23A-209ENST00000575135 EFCAB14O75071 495 aa19.41■□□□□ 0.7
TVP23A-209ENST00000575135 POLR2MP0CAP2 368 aa19.41■□□□□ 0.7
TVP23A-209ENST00000575135 TGFB3P10600 412 aa19.41■□□□□ 0.7
TVP23A-209ENST00000575135 CCND2P30279 289 aa19.41■□□□□ 0.7
TVP23A-209ENST00000575135 TRDNQ13061 729 aa19.41■□□□□ 0.7
TVP23A-209ENST00000575135 FAM117BQ6P1L5 589 aa19.41■□□□□ 0.7
TVP23A-209ENST00000575135 YTHDC1Q96MU7 727 aaKnown RBP19.41■□□□□ 0.7
TVP23A-209ENST00000575135 C16orf70Q9BSU1 422 aa19.41■□□□□ 0.7
TVP23A-209ENST00000575135 BCAS3Q9H6U6 928 aa19.41■□□□□ 0.7
TVP23A-209ENST00000575135 RIOX1Q9H6W3 641 aa19.41■□□□□ 0.7
TVP23A-209ENST00000575135 SUGCTQ9HAC7 445 aa19.41■□□□□ 0.7
TVP23A-209ENST00000575135 MLXIPQ9HAP2 919 aa19.41■□□□□ 0.7
TVP23A-209ENST00000575135 LINC01553A4QN01 128 aa19.4■□□□□ 0.7
TVP23A-209ENST00000575135 IFIT3O14879 490 aaKnown RBP19.4■□□□□ 0.7
TVP23A-209ENST00000575135 CYTH3O43739 400 aa19.4■□□□□ 0.7
TVP23A-209ENST00000575135 LGR5O75473 907 aa19.4■□□□□ 0.7
TVP23A-209ENST00000575135 CYP21A2P08686 494 aa19.4■□□□□ 0.7
TVP23A-209ENST00000575135 GSPT1P15170 499 aaKnown RBP19.4■□□□□ 0.7
TVP23A-209ENST00000575135 THPOP40225 353 aa19.4■□□□□ 0.7
TVP23A-209ENST00000575135 TRAF1Q13077 416 aa19.4■□□□□ 0.7
TVP23A-209ENST00000575135 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.4■□□□□ 0.7
TVP23A-209ENST00000575135 SERINC5Q86VE9 423 aa19.4■□□□□ 0.7
TVP23A-209ENST00000575135 LMCD1Q9NZU5 365 aa19.4■□□□□ 0.7
TVP23A-209ENST00000575135 PDE4AP27815 886 aa19.39■□□□□ 0.69
TVP23A-209ENST00000575135 ERVK-21P61565 698 aa19.39■□□□□ 0.69
TVP23A-209ENST00000575135 PTH1RQ03431 593 aa19.39■□□□□ 0.69
TVP23A-209ENST00000575135 TGS1Q96RS0 853 aaKnown RBP19.39■□□□□ 0.69
TVP23A-209ENST00000575135 TAF6LQ9Y6J9 622 aa19.39■□□□□ 0.69
TVP23A-209ENST00000575135 U3KPZ7 1027 aaPredicted RBP19.39■□□□□ 0.69
TVP23A-209ENST00000575135 PNMA6FA0A0J9YX94 578 aa19.38■□□□□ 0.69
TVP23A-209ENST00000575135 C17orf102A2RUQ5 167 aa19.38■□□□□ 0.69
TVP23A-209ENST00000575135 RSPH10B2B2RC85 870 aa19.38■□□□□ 0.69
TVP23A-209ENST00000575135 H3BRB1 525 aa19.38■□□□□ 0.69
TVP23A-209ENST00000575135 RSPH10BP0C881 870 aa19.38■□□□□ 0.69
TVP23A-209ENST00000575135 TROAPQ12815 778 aa19.38■□□□□ 0.69
TVP23A-209ENST00000575135 TTC22Q5TAA0 569 aa19.38■□□□□ 0.69
TVP23A-209ENST00000575135 EMSYQ7Z589 1322 aa19.38■□□□□ 0.69
TVP23A-209ENST00000575135 DBF4BQ8NFT6 615 aa19.38■□□□□ 0.69
TVP23A-209ENST00000575135 ATP6V0A1Q93050 837 aa19.38■□□□□ 0.69
TVP23A-209ENST00000575135 TUT1Q9H6E5 874 aaKnown RBP19.38■□□□□ 0.69
TVP23A-209ENST00000575135 ERICH2A1L162 156 aa19.37■□□□□ 0.69
TVP23A-209ENST00000575135 LGALS2P05162 132 aa19.37■□□□□ 0.69
TVP23A-209ENST00000575135 SMIM10L2AP0DMW4 78 aa19.37■□□□□ 0.69
TVP23A-209ENST00000575135 SMIM10L2BP0DMW5 78 aa19.37■□□□□ 0.69
TVP23A-209ENST00000575135 MRPS9P82933 396 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms