RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ZNF697Q5TEC3 545 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 XRRA1Q6P2D8 792 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 MICU3Q86XE3 530 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 FANCBQ8NB91 859 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 SPRYD3Q8NCJ5 442 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 VWCEQ96DN2 955 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 GUCD1Q96NT3 240 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 LRRC2Q9BYS8 371 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 TRMT13Q9NUP7 481 aaKnown RBP12.17□□□□□ -0.46
LITAF-216ENST00000574848 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
LITAF-216ENST00000574848 SNX14Q9Y5W7 946 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 MYH7BA7E2Y1 1941 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 HAS3O00219 553 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 CD2BP2O95400 341 aaKnown RBP12.16□□□□□ -0.46
LITAF-216ENST00000574848 PFKMP08237 780 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 MYCLP12524 364 aaPredicted RBP12.16□□□□□ -0.46
LITAF-216ENST00000574848 CASTP20810 708 aaKnown RBP12.16□□□□□ -0.46
LITAF-216ENST00000574848 NUCB2P80303 420 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 MRPS9P82933 396 aaKnown RBP12.16□□□□□ -0.46
LITAF-216ENST00000574848 RBL2Q08999 1139 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 FUT2Q10981 343 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 CELF3Q5SZQ8 465 aaKnown RBP12.16□□□□□ -0.46
LITAF-216ENST00000574848 MYSM1Q5VVJ2 828 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 PCNX4Q63HM2 1172 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 FCHSD1Q86WN1 690 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 FBXL16Q8N461 479 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 HERVK_113Q902F9 699 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 GBP4Q96PP9 640 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 CTAGE1Q96RT6 745 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 KATNAL1Q9BW62 490 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 CYP46A1Q9Y6A2 500 aa12.16□□□□□ -0.46
LITAF-216ENST00000574848 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.15□□□□□ -0.46
LITAF-216ENST00000574848 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.15□□□□□ -0.46
LITAF-216ENST00000574848 GGPS1O95749 300 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 CYP2C9P11712 490 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 DDIT3P35638 169 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 SP2Q02086 613 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 SEMA3FQ13275 785 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 ANKRD1Q15327 319 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 GNPTABQ3T906 1256 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 PPP1R18Q6NYC8 613 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 ZNF365Q70YC5 407 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 DHX37Q8IY37 1157 aaKnown RBP12.15□□□□□ -0.46
LITAF-216ENST00000574848 CMTR1Q8N1G2 835 aaKnown RBP12.15□□□□□ -0.46
LITAF-216ENST00000574848 PIBF1Q8WXW3 757 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 CUL5Q93034 780 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
LITAF-216ENST00000574848 TTYH1Q9H313 450 aaPredicted RBP12.15□□□□□ -0.46
LITAF-216ENST00000574848 GTF2IRD1Q9UHL9 959 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.46
LITAF-216ENST00000574848 SCN5AQ14524 2016 aa12.15□□□□□ -0.47
LITAF-216ENST00000574848 GBF1Q92538 1859 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 CDH23Q9H251 3354 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 SPATA31C2B4DYI2 1134 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 hCG_1984214I3L0E3 225 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 ZBTB43O43298 467 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 FIBPO43427 364 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 PPFIA4O75335 1185 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 ACRP10323 421 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 HOXC8P31273 242 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 RFC2P35250 354 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 CCL23P55773 120 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 RTN1Q16799 776 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 HSDL1Q3SXM5 330 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 FAM47CQ5HY64 1035 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 USP17L6PQ6QN14 398 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 SYNE3Q6ZMZ3 975 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 RAB11FIP4Q86YS3 637 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 ZNF713Q8N859 430 aaPredicted RBP12.14□□□□□ -0.47
LITAF-216ENST00000574848 SMARCC2Q8TAQ2 1214 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 CAGE1Q8TC20 777 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.47
LITAF-216ENST00000574848 ZSCAN31Q96LW9 406 aaPredicted RBP12.14□□□□□ -0.47
LITAF-216ENST00000574848 TCEANC2Q96MN5 208 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 SENP7Q9BQF6 1050 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 AGXT2Q9BYV1 514 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 MTIF3Q9H2K0 278 aaKnown RBP12.14□□□□□ -0.47
LITAF-216ENST00000574848 DOCK5Q9H7D0 1870 aa12.14□□□□□ -0.47
LITAF-216ENST00000574848 GOLGA6L22H0YM25 854 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 ZNF286BP0CG31 522 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 DNAJB2P25686 324 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 PSEN2P49810 448 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 BFSP2Q13515 415 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 NEDD9Q14511 834 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 MFSD10Q14728 455 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 WWC2Q6AWC2 1192 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 GDF6Q6KF10 455 aaPredicted RBP12.13□□□□□ -0.47
LITAF-216ENST00000574848 METTL7BQ6UX53 244 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 RPUSD2Q8IZ73 545 aaKnown RBP12.13□□□□□ -0.47
LITAF-216ENST00000574848 CCDC155Q8N6L0 562 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 AFAP1L1Q8TED9 768 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 GPRASP2Q96D09 838 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 SCLYQ96I15 445 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 TMX3Q96JJ7 454 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 SPATA33Q96N06 139 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 JAKMIP1Q96N16 626 aaKnown RBP12.13□□□□□ -0.47
LITAF-216ENST00000574848 C16orf70Q9BSU1 422 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 UPF3BQ9BZI7 483 aaKnown RBP12.13□□□□□ -0.47
LITAF-216ENST00000574848 SEMA6BQ9H3T3 888 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms