RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 MICU3Q86XE3 530 aa20.11■□□□□ 0.81
SMG6-214ENST00000573827 FAM161BQ96MY7 647 aa20.11■□□□□ 0.81
SMG6-214ENST00000573827 SCN5AQ14524 2016 aa20.1■□□□□ 0.81
SMG6-214ENST00000573827 GRXCR1A8MXD5 290 aa20.1■□□□□ 0.81
SMG6-214ENST00000573827 SPATA31C2B4DYI2 1134 aa20.1■□□□□ 0.81
SMG6-214ENST00000573827 GGPS1O95749 300 aa20.1■□□□□ 0.81
SMG6-214ENST00000573827 CASTP20810 708 aaKnown RBP20.1■□□□□ 0.81
SMG6-214ENST00000573827 HSPA4P34932 840 aa20.1■□□□□ 0.81
SMG6-214ENST00000573827 FAM47CQ5HY64 1035 aa20.1■□□□□ 0.81
SMG6-214ENST00000573827 ZNF697Q5TEC3 545 aa20.1■□□□□ 0.81
SMG6-214ENST00000573827 GDF6Q6KF10 455 aaPredicted RBP20.1■□□□□ 0.81
SMG6-214ENST00000573827 TYW1BQ6NUM6 668 aa20.1■□□□□ 0.81
SMG6-214ENST00000573827 DHX37Q8IY37 1157 aaKnown RBP20.1■□□□□ 0.81
SMG6-214ENST00000573827 DHX38Q92620 1227 aaKnown RBP20.1■□□□□ 0.81
SMG6-214ENST00000573827 TMEM265A0A087WTH1 108 aa20.09■□□□□ 0.81
SMG6-214ENST00000573827 PITPNM1O00562 1244 aa20.09■□□□□ 0.81
SMG6-214ENST00000573827 PPFIA4O75335 1185 aa20.09■□□□□ 0.81
SMG6-214ENST00000573827 ZNF286BP0CG31 522 aa20.09■□□□□ 0.81
SMG6-214ENST00000573827 HIC1Q14526 733 aa20.09■□□□□ 0.81
SMG6-214ENST00000573827 GPNMBQ14956 572 aa20.09■□□□□ 0.81
SMG6-214ENST00000573827 PCNX4Q63HM2 1172 aa20.09■□□□□ 0.81
SMG6-214ENST00000573827 CCDC82Q8N4S0 544 aa20.09■□□□□ 0.81
SMG6-214ENST00000573827 CDX2Q99626 313 aaPredicted RBP20.09■□□□□ 0.81
SMG6-214ENST00000573827 C16orf70Q9BSU1 422 aa20.09■□□□□ 0.81
SMG6-214ENST00000573827 SEC63Q9UGP8 760 aaKnown RBP20.09■□□□□ 0.81
SMG6-214ENST00000573827 GTF2IRD1Q9UHL9 959 aa20.09■□□□□ 0.81
SMG6-214ENST00000573827 TELO2Q9Y4R8 837 aa20.09■□□□□ 0.81
SMG6-214ENST00000573827 TANC1Q9C0D5 1861 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 STAM2O75886 525 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 FGBP02675 491 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 CPA1P15085 419 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 DNAJB2P25686 324 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 PBX2P40425 430 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 PSEN2P49810 448 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 RBL2Q08999 1139 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 KRT32Q14532 448 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 SPATA33Q96N06 139 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 PBX4Q9BYU1 374 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 HDAC6Q9UBN7 1215 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 SNX14Q9Y5W7 946 aa20.08■□□□□ 0.81
SMG6-214ENST00000573827 TRIP12Q14669 1992 aaPredicted RBP20.08■□□□□ 0.8
SMG6-214ENST00000573827 SORBS3O60504 671 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 IQCF3P0C7M6 154 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 CDC27P30260 824 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 HOXC8P31273 242 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 RCAN1P53805 252 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 MFSD10Q14728 455 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 PTGISQ16647 500 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 TRIM71Q2Q1W2 868 aaKnown RBP20.07■□□□□ 0.8
SMG6-214ENST00000573827 WWC2Q6AWC2 1192 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 XRRA1Q6P2D8 792 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 TRAF7Q6Q0C0 670 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 PSTPIP2Q9H939 334 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 RTEL1Q9NZ71 1219 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 REV3LO60673 3130 aa20.07■□□□□ 0.8
SMG6-214ENST00000573827 RBAK-RBAKDNI3L0D1 243 aa20.06■□□□□ 0.8
SMG6-214ENST00000573827 ZBTB43O43298 467 aa20.06■□□□□ 0.8
SMG6-214ENST00000573827 UBE2SQ16763 222 aa20.06■□□□□ 0.8
SMG6-214ENST00000573827 RTN1Q16799 776 aa20.06■□□□□ 0.8
SMG6-214ENST00000573827 KIAA0753Q2KHM9 967 aa20.06■□□□□ 0.8
SMG6-214ENST00000573827 METTL7BQ6UX53 244 aa20.06■□□□□ 0.8
SMG6-214ENST00000573827 OTOP2Q7RTS6 562 aa20.06■□□□□ 0.8
SMG6-214ENST00000573827 FBXL16Q8N461 479 aa20.06■□□□□ 0.8
SMG6-214ENST00000573827 SMARCC2Q8TAQ2 1214 aa20.06■□□□□ 0.8
SMG6-214ENST00000573827 WNT8BQ93098 351 aa20.06■□□□□ 0.8
SMG6-214ENST00000573827 AGXT2Q9BYV1 514 aa20.06■□□□□ 0.8
SMG6-214ENST00000573827 RBM28Q9NW13 759 aaKnown RBP20.06■□□□□ 0.8
SMG6-214ENST00000573827 KLF18A0A0U1RQI7 1052 aa20.05■□□□□ 0.8
SMG6-214ENST00000573827 FIBPO43427 364 aa20.05■□□□□ 0.8
SMG6-214ENST00000573827 HMGB1P09429 215 aaKnown RBP20.05■□□□□ 0.8
SMG6-214ENST00000573827 ITGB5P18084 799 aa20.05■□□□□ 0.8
SMG6-214ENST00000573827 GNPTABQ3T906 1256 aa20.05■□□□□ 0.8
SMG6-214ENST00000573827 RPUSD2Q8IZ73 545 aaKnown RBP20.05■□□□□ 0.8
SMG6-214ENST00000573827 CUL5Q93034 780 aa20.05■□□□□ 0.8
SMG6-214ENST00000573827 SENP7Q9BQF6 1050 aa20.05■□□□□ 0.8
SMG6-214ENST00000573827 NID2Q14112 1375 aa20.05■□□□□ 0.8
SMG6-214ENST00000573827 DOCK5Q9H7D0 1870 aa20.05■□□□□ 0.8
SMG6-214ENST00000573827 PFKMP08237 780 aa20.04■□□□□ 0.8
SMG6-214ENST00000573827 RFC2P35250 354 aa20.04■□□□□ 0.8
SMG6-214ENST00000573827 CHMP4BP1P59074 171 aa20.04■□□□□ 0.8
SMG6-214ENST00000573827 ZNF200P98182 395 aaPredicted RBP20.04■□□□□ 0.8
SMG6-214ENST00000573827 GRIN2CQ14957 1233 aa20.04■□□□□ 0.8
SMG6-214ENST00000573827 HEATR3Q7Z4Q2 680 aa20.04■□□□□ 0.8
SMG6-214ENST00000573827 CAGE1Q8TC20 777 aa20.04■□□□□ 0.8
SMG6-214ENST00000573827 TIFAQ96CG3 184 aa20.04■□□□□ 0.8
SMG6-214ENST00000573827 GPR20Q99678 358 aa20.04■□□□□ 0.8
SMG6-214ENST00000573827 ALG1Q9BT22 464 aa20.04■□□□□ 0.8
SMG6-214ENST00000573827 KATNAL1Q9BW62 490 aa20.04■□□□□ 0.8
SMG6-214ENST00000573827 UBIAD1Q9Y5Z9 338 aa20.04■□□□□ 0.8
SMG6-214ENST00000573827 STXBP3O00186 592 aa20.03■□□□□ 0.8
SMG6-214ENST00000573827 ATP9AO75110 1047 aa20.03■□□□□ 0.8
SMG6-214ENST00000573827 LGALS2P05162 132 aa20.03■□□□□ 0.8
SMG6-214ENST00000573827 KCNA2P16389 499 aa20.03■□□□□ 0.8
SMG6-214ENST00000573827 BFSP2Q13515 415 aa20.03■□□□□ 0.8
SMG6-214ENST00000573827 NEDD9Q14511 834 aa20.03■□□□□ 0.8
SMG6-214ENST00000573827 SYNE3Q6ZMZ3 975 aa20.03■□□□□ 0.8
SMG6-214ENST00000573827 CYFIP1Q7L576 1253 aa20.03■□□□□ 0.8
SMG6-214ENST00000573827 C7orf31Q8N865 590 aa20.03■□□□□ 0.8
SMG6-214ENST00000573827 MYLIPQ8WY64 445 aa20.03■□□□□ 0.8
SMG6-214ENST00000573827 JAKMIP1Q96N16 626 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms