RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 RBM43Q6ZSC3 357 aaKnown RBP15.42■□□□□ 0.06
CCDC40-209ENST00000573474 NLRX1Q86UT6 975 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 ABRAQ8N0Z2 381 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 GJA10Q969M2 543 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 DHX58Q96C10 678 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 CCDC34Q96HJ3 373 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 ZFP91Q96JP5 570 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-209ENST00000573474 ZNF577Q9BSK1 485 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 EFCC1Q9HA90 598 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 SERTAD1Q9UHV2 236 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 HOOK1Q9UJC3 728 aaKnown RBP15.42■□□□□ 0.06
CCDC40-209ENST00000573474 STK24Q9Y6E0 443 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 ADGRA2Q96PE1 1338 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 DNAJC25-GNG10A0A024R161 153 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 A0A087X0B3 334 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 SOWAHBA6NEL2 793 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 RASSF10A6NK89 507 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 MAFGO15525 162 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 ACTN4O43707 911 aaKnown RBP15.41■□□□□ 0.06
CCDC40-209ENST00000573474 SLFN14P0C7P3 912 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 MAPK4P31152 587 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 ALDH5A1P51649 535 aaPredicted RBP15.41■□□□□ 0.06
CCDC40-209ENST00000573474 NOGQ13253 232 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 MTMR1Q13613 665 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 STXBP2Q15833 593 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 DEFB115Q30KQ5 88 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 LRCH2Q5VUJ6 765 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 RRAGBQ5VZM2 374 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 KRT79Q5XKE5 535 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 CYP4F22Q6NT55 531 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 CEP57L1Q8IYX8 460 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 RASSF8Q8NHQ8 419 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 GPRASP2Q96D09 838 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 CALML4Q96GE6 196 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 UIMC1Q96RL1 719 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 MPHOSPH6Q99547 160 aaKnown RBP15.41■□□□□ 0.06
CCDC40-209ENST00000573474 RIT2Q99578 217 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 MMTAG2Q9BU76 263 aaKnown RBP15.41■□□□□ 0.06
CCDC40-209ENST00000573474 WDR11Q9BZH6 1224 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 ZFYVE28Q9HCC9 887 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 AGO4Q9HCK5 861 aaKnown RBP15.41■□□□□ 0.06
CCDC40-209ENST00000573474 DISC1Q9NRI5 854 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 KCNH7Q9NS40 1196 aa15.41■□□□□ 0.06
CCDC40-209ENST00000573474 LOC102724159A0A0B4J2E5 919 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 POTEMA6NI47 508 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 IPO5O00410 1097 aaKnown RBP15.4■□□□□ 0.06
CCDC40-209ENST00000573474 GAS7O60861 476 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 EIF3JO75822 258 aaKnown RBP15.4■□□□□ 0.06
CCDC40-209ENST00000573474 PSMD10O75832 226 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 SPIRE1Q08AE8 756 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 KARSQ15046 597 aaKnown RBP15.4■□□□□ 0.06
CCDC40-209ENST00000573474 PWP2Q15269 919 aaKnown RBP15.4■□□□□ 0.06
CCDC40-209ENST00000573474 E2F4Q16254 413 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 LRSAM1Q6UWE0 723 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 CKAP2LQ8IYA6 745 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-209ENST00000573474 ERMNQ8TAM6 284 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 CDHR1Q96JP9 859 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 INPP4AQ96PE3 977 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-209ENST00000573474 TEKT3Q9BXF9 490 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 CPA4Q9UI42 421 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 VAV3Q9UKW4 847 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 IVNS1ABPQ9Y6Y0 642 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 ASTN1O14525 1302 aa15.4■□□□□ 0.06
CCDC40-209ENST00000573474 TLR2O60603 784 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 PGK2P07205 417 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 EDNRBP24530 442 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 STAT6P42226 847 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 GRM1Q13255 1194 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 PPP2R5CQ13362 524 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 GSE1Q14687 1217 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 GNPTABQ3T906 1256 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 C17orf99Q6UX52 265 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 OTOP1Q7RTM1 612 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 PLEKHH3Q7Z736 793 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 SNX29Q8TEQ0 813 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 CAPNS2Q96L46 248 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 ZIC5Q96T25 663 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 CUEDC2Q9H467 287 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 TBC1D22BQ9NU19 505 aa15.39■□□□□ 0.05
CCDC40-209ENST00000573474 CA12O43570 354 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 ALDH1A1P00352 501 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 PLCG1P19174 1290 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 CCT6AP40227 531 aaKnown RBP15.38■□□□□ 0.05
CCDC40-209ENST00000573474 MDM2Q00987 491 aaPredicted RBP15.38■□□□□ 0.05
CCDC40-209ENST00000573474 PDE4DQ08499 809 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 ZRSR1Q15695 479 aaKnown RBP15.38■□□□□ 0.05
CCDC40-209ENST00000573474 HYIQ5T013 277 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 HAUS3Q68CZ6 603 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 NCAPH2Q6IBW4 605 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 PDXDC2PQ6P474 469 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 SASS6Q6UVJ0 657 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 GPR142Q7Z601 462 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 SH3RF1Q7Z6J0 888 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 PAGE5Q96GU1 130 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 CDK5RAP3Q96JB5 506 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 MAGEF1Q9HAY2 307 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 KIAA1468Q9P260 1216 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 KDM3AQ9Y4C1 1321 aa15.38■□□□□ 0.05
CCDC40-209ENST00000573474 SLC15A5A6NIM6 579 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms