RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 MRPL11Q9Y3B7 192 aaKnown RBP12.8□□□□□ -0.36
ABR-220ENST00000573325 C5orf42Q9H799 3197 aa12.8□□□□□ -0.36
ABR-220ENST00000573325 RAD50Q92878 1312 aa12.8□□□□□ -0.36
ABR-220ENST00000573325 PPFIA4O75335 1185 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 GJB5O95377 273 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 ZNF286BP0CG31 522 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 UBA1P22314 1058 aaKnown RBP12.79□□□□□ -0.36
ABR-220ENST00000573325 HOXA13P31271 388 aaPredicted RBP12.79□□□□□ -0.36
ABR-220ENST00000573325 ERVK-21P61565 698 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 LAMC2Q13753 1193 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 GRM4Q14833 912 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 PGM5Q15124 567 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 DGKDQ16760 1214 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 ZNF618Q5T7W0 954 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 SAMD3Q8N6K7 520 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
ABR-220ENST00000573325 IGDCC4Q8TDY8 1250 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
ABR-220ENST00000573325 AMNQ9BXJ7 453 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 SUGCTQ9HAC7 445 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 VAT1LQ9HCJ6 419 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 C11orf16Q9NQ32 467 aa12.79□□□□□ -0.36
ABR-220ENST00000573325 MAP3K20Q9NYL2 800 aaKnown RBP12.79□□□□□ -0.36
ABR-220ENST00000573325 TCF20Q9UGU0 1960 aaKnown RBP12.78□□□□□ -0.36
ABR-220ENST00000573325 LINC01553A4QN01 128 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 CFBP00751 764 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 CASTP20810 708 aaKnown RBP12.78□□□□□ -0.36
ABR-220ENST00000573325 COL9A1P20849 921 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 ICAM3P32942 547 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 HTRA4P83105 476 aaPredicted RBP12.78□□□□□ -0.36
ABR-220ENST00000573325 MFSD10Q14728 455 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 COL19A1Q14993 1142 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 IMMTQ16891 758 aaKnown RBP12.78□□□□□ -0.36
ABR-220ENST00000573325 KIAA0753Q2KHM9 967 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 BRDTQ58F21 947 aaPredicted RBP12.78□□□□□ -0.36
ABR-220ENST00000573325 CNKSR3Q6P9H4 555 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.78□□□□□ -0.36
ABR-220ENST00000573325 CHST3Q7LGC8 479 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 RETREG2Q8NC44 543 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 ZFP91Q96JP5 570 aaPredicted RBP12.78□□□□□ -0.36
ABR-220ENST00000573325 PIGSQ96S52 555 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 KRT23Q9C075 422 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 MYO7AQ13402 2215 aa12.78□□□□□ -0.36
ABR-220ENST00000573325 WDFY4Q6ZS81 3184 aa12.77□□□□□ -0.36
ABR-220ENST00000573325 COL4A4P53420 1690 aaPredicted RBP12.77□□□□□ -0.36
ABR-220ENST00000573325 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.77□□□□□ -0.37
ABR-220ENST00000573325 ABHD14A-ACY1A0A1B0GW23 586 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 B4DLN1 442 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 HIP1O00291 1037 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 LGR5O75473 907 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 TGFB3P10600 412 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 ACTN1P12814 892 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 CHMLP26374 656 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 MRPL12P52815 198 aaKnown RBP12.77□□□□□ -0.37
ABR-220ENST00000573325 TTC22Q5TAA0 569 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 ARHGEF16Q5VV41 709 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 MB21D2Q8IYB1 491 aaPredicted RBP12.77□□□□□ -0.37
ABR-220ENST00000573325 ARNTL2Q8WYA1 636 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 CNNM2Q9H8M5 875 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 DIAPH3Q9NSV4 1193 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 PCDHA1Q9Y5I3 950 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 MUC6Q6W4X9 2439 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 COL4A6Q14031 1691 aa12.77□□□□□ -0.37
ABR-220ENST00000573325 SPATA31C2B4DYI2 1134 aa12.76□□□□□ -0.37
ABR-220ENST00000573325 MEIS2O14770 477 aa12.76□□□□□ -0.37
ABR-220ENST00000573325 PARNO95453 639 aaKnown RBP12.76□□□□□ -0.37
ABR-220ENST00000573325 GGPS1O95749 300 aa12.76□□□□□ -0.37
ABR-220ENST00000573325 PLEKHG4Q58EX7 1191 aa12.76□□□□□ -0.37
ABR-220ENST00000573325 IFIT1BQ5T764 474 aaKnown RBP12.76□□□□□ -0.37
ABR-220ENST00000573325 DHX37Q8IY37 1157 aaKnown RBP12.76□□□□□ -0.37
ABR-220ENST00000573325 MPHOSPH6Q99547 160 aaKnown RBP12.76□□□□□ -0.37
ABR-220ENST00000573325 RAD9AQ99638 391 aa12.76□□□□□ -0.37
ABR-220ENST00000573325 FTOQ9C0B1 505 aaKnown RBP eCLIP12.76□□□□□ -0.37
ABR-220ENST00000573325 LMCD1Q9NZU5 365 aa12.76□□□□□ -0.37
ABR-220ENST00000573325 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
ABR-220ENST00000573325 MRVI1Q9Y6F6 885 aa12.76□□□□□ -0.37
ABR-220ENST00000573325 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.75□□□□□ -0.37
ABR-220ENST00000573325 SGSM2O43147 1006 aa12.75□□□□□ -0.37
ABR-220ENST00000573325 CRIPAKQ8N1N5 446 aa12.75□□□□□ -0.37
ABR-220ENST00000573325 DBF4BQ8NFT6 615 aa12.75□□□□□ -0.37
ABR-220ENST00000573325 GDPD5Q8WTR4 605 aa12.75□□□□□ -0.37
ABR-220ENST00000573325 MAP4K1Q92918 833 aa12.75□□□□□ -0.37
ABR-220ENST00000573325 SPATA33Q96N06 139 aa12.75□□□□□ -0.37
ABR-220ENST00000573325 GPR20Q99678 358 aa12.75□□□□□ -0.37
ABR-220ENST00000573325 ALG1Q9BT22 464 aa12.75□□□□□ -0.37
ABR-220ENST00000573325 RNPEPQ9H4A4 650 aa12.75□□□□□ -0.37
ABR-220ENST00000573325 EPHX3Q9H6B9 360 aa12.75□□□□□ -0.37
ABR-220ENST00000573325 ZBTB47Q9UFB7 747 aaPredicted RBP12.75□□□□□ -0.37
ABR-220ENST00000573325 PNMA6FA0A0J9YX94 578 aa12.74□□□□□ -0.37
ABR-220ENST00000573325 E7EWF7 191 aa12.74□□□□□ -0.37
ABR-220ENST00000573325 TREHO43280 583 aa12.74□□□□□ -0.37
ABR-220ENST00000573325 SORBS3O60504 671 aa12.74□□□□□ -0.37
ABR-220ENST00000573325 LGALS2P05162 132 aa12.74□□□□□ -0.37
ABR-220ENST00000573325 FAM26DQ5JW98 314 aa12.74□□□□□ -0.37
ABR-220ENST00000573325 C7orf31Q8N865 590 aa12.74□□□□□ -0.37
ABR-220ENST00000573325 C17orf80Q9BSJ5 609 aa12.74□□□□□ -0.37
ABR-220ENST00000573325 UBAC1Q9BSL1 405 aa12.74□□□□□ -0.37
ABR-220ENST00000573325 RC3H2Q9HBD1 1191 aaKnown RBP12.74□□□□□ -0.37
ABR-220ENST00000573325 COG5Q9UP83 839 aa12.74□□□□□ -0.37
ABR-220ENST00000573325 MYH6P13533 1939 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms