RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 MEIS1O00470 390 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 SORBS3O60504 671 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 GH1P01241 217 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 CYP3A4P08684 503 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 ARP10275 920 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 UBA1P22314 1058 aaKnown RBP9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 SREBF1P36956 1147 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 CDK7P50613 346 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 SNX17Q15036 470 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 HSDL1Q3SXM5 330 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 C1orf53Q5VUE5 145 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 KCNV1Q6PIU1 500 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 NLRX1Q86UT6 975 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 BLIDQ8IZY5 108 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 CCDC148Q8NFR7 591 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 OXER1Q8TDS5 423 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 EMID1Q96A84 441 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 TMX3Q96JJ7 454 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 MXRA8Q9BRK3 442 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 ALG1Q9BT22 464 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 SH2B1Q9NRF2 756 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 PCDH10Q9P2E7 1040 aa9.94□□□□□ -0.82
TRAPPC1-203ENST00000571739 ELP1O95163 1332 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 FAM86B1E9PN63 330 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 MAFGO15525 162 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 FIBPO43427 364 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 ST18O60284 1047 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 EVI5O60447 810 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 GGPS1O95749 300 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 FAM86B2P0C5J1 330 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 RTP1P59025 263 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 PSMC6P62333 389 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 ARHGAP4P98171 946 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 PURAQ00577 322 aaKnown RBP9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 LAMC2Q13753 1193 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 CEP55Q53EZ4 464 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 DHX37Q8IY37 1157 aaKnown RBP9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 FAM177A1Q8N128 213 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 REXO1Q8N1G1 1221 aaKnown RBP9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 SLC43A3Q8NBI5 491 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 DAGLBQ8NCG7 672 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 IL27Q8NEV9 243 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 BICD2Q8TD16 824 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 GPRASP2Q96D09 838 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 GLT1D1Q96MS3 346 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 SENP7Q9BQF6 1050 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 LLPHQ9BRT6 129 aaKnown RBP9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 STARD7Q9NQZ5 370 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 KCNH7Q9NS40 1196 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 MYH7BA7E2Y1 1941 aa9.93□□□□□ -0.82
TRAPPC1-203ENST00000571739 ALPK3Q96L96 1907 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 IGLV3-22A0A075B6J6 115 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 H0YGN5 161 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 ARVCFO00192 962 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 ZEB2O60315 1214 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 PPFIA4O75335 1185 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 MMP3P08254 477 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 MYL3P08590 195 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 KCNA2P16389 499 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 CIITAP33076 1130 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 CPT1AP50416 773 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 TLE2Q04725 743 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 ITGA7Q13683 1181 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 NEDD9Q14511 834 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 GNPTABQ3T906 1256 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 TRIM60Q495X7 471 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 EARS2Q5JPH6 523 aaKnown RBP9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 MCTP2Q6DN12 878 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 GALNT17Q6IS24 598 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 CYFIP1Q7L576 1253 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 TBCKQ8TEA7 893 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 PPP1R13LQ8WUF5 828 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 WASF1Q92558 559 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 KAT2BQ92831 832 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 VTI1AQ96AJ9 217 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 SPATA33Q96N06 139 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 EHMT1Q9H9B1 1298 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 MLXIPQ9HAP2 919 aa9.92□□□□□ -0.82
TRAPPC1-203ENST00000571739 GSTTP1A0A1W2PQM5 241 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 BTBD18B2RXH4 712 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 DHX15O43143 795 aaKnown RBP9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 KPNA6O60684 536 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 CABYRO75952 493 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 HOXD8P13378 290 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 ZNF76P36508 570 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 USP11P51784 963 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 FAAP100Q0VG06 881 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 NR5A1Q13285 461 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 MTMR1Q13613 665 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 KRT40Q6A162 431 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 ANKRD33Q7Z3H0 272 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 SH3RF1Q7Z6J0 888 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 PLA2G4DQ86XP0 818 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 C7orf61Q8IZ16 206 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 PPTC7Q8NI37 304 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 TNFRSF25Q93038 417 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 LENG9Q96B70 501 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 TOX2Q96NM4 488 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 UIMC1Q96RL1 719 aa9.91□□□□□ -0.82
TRAPPC1-203ENST00000571739 GPR20Q99678 358 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms