RNA–Protein interactions for RNA: ENST00000571245.5

ATP2A3-209, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 868 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-209ENST00000571245 CDKL5O76039 1030 aa15.72■□□□□ 0.11
ATP2A3-209ENST00000571245 CD4P01730 458 aa15.72■□□□□ 0.11
ATP2A3-209ENST00000571245 PPIGQ13427 754 aaKnown RBP eCLIP15.72■□□□□ 0.11
ATP2A3-209ENST00000571245 GNPTABQ3T906 1256 aa15.72■□□□□ 0.11
ATP2A3-209ENST00000571245 CCDC83Q8IWF9 413 aa15.72■□□□□ 0.11
ATP2A3-209ENST00000571245 HSCBQ8IWL3 235 aa15.72■□□□□ 0.11
ATP2A3-209ENST00000571245 DHX37Q8IY37 1157 aaKnown RBP15.72■□□□□ 0.11
ATP2A3-209ENST00000571245 TMX3Q96JJ7 454 aa15.72■□□□□ 0.11
ATP2A3-209ENST00000571245 HIPK3Q9H422 1215 aa15.72■□□□□ 0.11
ATP2A3-209ENST00000571245 PSTPIP2Q9H939 334 aa15.72■□□□□ 0.11
ATP2A3-209ENST00000571245 GRIN2DO15399 1336 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 B4GALT4O60513 344 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 IFNAR1P17181 557 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 AKAP17AQ02040 695 aaKnown RBP15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 FUT2Q10981 343 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 NTRK3Q16288 839 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 DGKDQ16760 1214 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 NBPF20Q3BBV1 942 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 C9orf50Q5SZB4 431 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 HEATR3Q7Z4Q2 680 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 PHKBQ93100 1093 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 SNX21Q969T3 373 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 RNPC3Q96LT9 517 aaKnown RBP15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 SLC26A6Q9BXS9 759 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 NOD1Q9Y239 953 aa15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 V9GY48 417 aaPredicted RBP15.71■□□□□ 0.11
ATP2A3-209ENST00000571245 hCG_1642624A0A1W2PR95 340 aa15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 STAM2O75886 525 aa15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 MMP3P08254 477 aa15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 TGFB3P10600 412 aa15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 CYP2C18P33260 490 aa15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 ARHGAP1Q07960 439 aa15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 SSRP1Q08945 709 aaKnown RBP15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 ST3GAL1Q11201 340 aa15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 NFRKBQ6P4R8 1299 aa15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 USP17L6PQ6QN14 398 aa15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 TRIM22Q8IYM9 498 aa15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 DEFB123Q8N688 67 aa15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 EMID1Q96A84 441 aaPredicted RBP15.7■□□□□ 0.1
ATP2A3-209ENST00000571245 KIAA1217Q5T5P2 1943 aa15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 K7ELQ4 463 aaPredicted RBP15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 PIK3CDO00329 1044 aa15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 PRPF3O43395 683 aaKnown RBP15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 CSF2RAP15509 400 aa15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 PTPN11Q06124 597 aaPredicted RBP15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 IL31RAQ8NI17 732 aa15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 PPTC7Q8NI37 304 aa15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 ZFP91Q96JP5 570 aaPredicted RBP15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 RNF26Q9BY78 433 aaPredicted RBP15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 MLXIPQ9HAP2 919 aa15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 TRMT13Q9NUP7 481 aaKnown RBP15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 RTEL1Q9NZ71 1219 aa15.69■□□□□ 0.1
ATP2A3-209ENST00000571245 LAMA3Q16787 3333 aa15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 BAZ2BQ9UIF8 2168 aaKnown RBP15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 SPDYE3A6NKU9 549 aa15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 SORBS3O60504 671 aa15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 DTNBO60941 627 aa15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 CTDNEP1O95476 244 aa15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 GGPS1O95749 300 aa15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 EPHB4P54760 987 aa15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 CELF3Q5SZQ8 465 aaKnown RBP15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 XRRA1Q6P2D8 792 aa15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 PSRC1Q6PGN9 363 aaPredicted RBP15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 NSUN7Q8NE18 718 aaKnown RBP15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 SPATA33Q96N06 139 aa15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 NOC4LQ9BVI4 516 aaKnown RBP15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 KATNAL1Q9BW62 490 aa15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 SZT2Q5T011 3432 aa15.68■□□□□ 0.1
ATP2A3-209ENST00000571245 NOP56O00567 594 aaKnown RBP15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 MEIS2O14770 477 aa15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 PPFIA4O75335 1185 aa15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 RGS20O76081 388 aa15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 NAPAP54920 295 aa15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 CCL23P55773 120 aa15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 NEDD9Q14511 834 aa15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 MYSM1Q5VVJ2 828 aa15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 PCNX4Q63HM2 1172 aa15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 NLRX1Q86UT6 975 aa15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 RPUSD2Q8IZ73 545 aaKnown RBP15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 C7orf31Q8N865 590 aa15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 RETREG2Q8NC44 543 aa15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 GPKOWQ92917 476 aaPredicted RBP eCLIP15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 LLPHQ9BRT6 129 aaKnown RBP15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 MTIF3Q9H2K0 278 aaKnown RBP15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 EHMT1Q9H9B1 1298 aa15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 ORC3Q9UBD5 711 aaPredicted RBP15.67■□□□□ 0.1
ATP2A3-209ENST00000571245 FIBPO43427 364 aa15.66■□□□□ 0.1
ATP2A3-209ENST00000571245 JAK2O60674 1132 aa15.66■□□□□ 0.1
ATP2A3-209ENST00000571245 DEXIO95424 95 aa15.66■□□□□ 0.1
ATP2A3-209ENST00000571245 ACRP10323 421 aa15.66■□□□□ 0.1
ATP2A3-209ENST00000571245 CYP2C9P11712 490 aa15.66■□□□□ 0.1
ATP2A3-209ENST00000571245 SCG2P13521 617 aa15.66■□□□□ 0.1
ATP2A3-209ENST00000571245 UBA1P22314 1058 aaKnown RBP15.66■□□□□ 0.1
ATP2A3-209ENST00000571245 SMAD3P84022 425 aaKnown RBP15.66■□□□□ 0.1
ATP2A3-209ENST00000571245 PTGISQ16647 500 aa15.66■□□□□ 0.1
ATP2A3-209ENST00000571245 PFKFB3Q16875 520 aaPredicted RBP15.66■□□□□ 0.1
ATP2A3-209ENST00000571245 Q7L0L9 218 aa15.66■□□□□ 0.1
ATP2A3-209ENST00000571245 PPP1R13LQ8WUF5 828 aa15.66■□□□□ 0.1
ATP2A3-209ENST00000571245 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.66■□□□□ 0.12e-6■■■■□ 23.3
ATP2A3-209ENST00000571245 IL23AQ9NPF7 189 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms