RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 HOXD11P31277 338 aaPredicted RBP22.11■■□□□ 1.13
SCARF1-204ENST00000570902 HSD17B4P51659 736 aa22.11■■□□□ 1.13
SCARF1-204ENST00000570902 RRP1P56182 461 aaKnown RBP22.11■■□□□ 1.13
SCARF1-204ENST00000570902 TCTN1Q2MV58 587 aa22.11■■□□□ 1.13
SCARF1-204ENST00000570902 TRAF7Q6Q0C0 670 aa22.11■■□□□ 1.13
SCARF1-204ENST00000570902 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.1■■□□□ 1.13
SCARF1-204ENST00000570902 B4E1Z4 1266 aa22.1■■□□□ 1.13
SCARF1-204ENST00000570902 AMHP03971 560 aa22.1■■□□□ 1.13
SCARF1-204ENST00000570902 GHRHRQ02643 423 aa22.1■■□□□ 1.13
SCARF1-204ENST00000570902 MYSM1Q5VVJ2 828 aa22.1■■□□□ 1.13
SCARF1-204ENST00000570902 FAM117BQ6P1L5 589 aa22.1■■□□□ 1.13
SCARF1-204ENST00000570902 LNPKQ9C0E8 428 aa22.1■■□□□ 1.13
SCARF1-204ENST00000570902 ZSWIM5Q9P217 1185 aa22.1■■□□□ 1.13
SCARF1-204ENST00000570902 SIP14410 1827 aa22.1■■□□□ 1.13
SCARF1-204ENST00000570902 MBTPS1Q14703 1052 aa22.09■■□□□ 1.13
SCARF1-204ENST00000570902 IMMTQ16891 758 aaKnown RBP22.09■■□□□ 1.13
SCARF1-204ENST00000570902 LEXMQ3ZCV2 418 aa22.09■■□□□ 1.13
SCARF1-204ENST00000570902 CELF3Q5SZQ8 465 aaKnown RBP22.09■■□□□ 1.13
SCARF1-204ENST00000570902 SAMD3Q8N6K7 520 aa22.09■■□□□ 1.13
SCARF1-204ENST00000570902 FBXO22Q8NEZ5 403 aa22.09■■□□□ 1.13
SCARF1-204ENST00000570902 WNT8BQ93098 351 aa22.09■■□□□ 1.13
SCARF1-204ENST00000570902 SPATA33Q96N06 139 aa22.09■■□□□ 1.13
SCARF1-204ENST00000570902 PDCD2LQ9BRP1 358 aa22.09■■□□□ 1.13
SCARF1-204ENST00000570902 UBAC1Q9BSL1 405 aa22.09■■□□□ 1.13
SCARF1-204ENST00000570902 KRT23Q9C075 422 aa22.09■■□□□ 1.13
SCARF1-204ENST00000570902 CTNNA3Q9UI47 895 aa22.09■■□□□ 1.13
SCARF1-204ENST00000570902 MYH6P13533 1939 aa22.08■■□□□ 1.13
SCARF1-204ENST00000570902 RSPH10B2B2RC85 870 aa22.08■■□□□ 1.13
SCARF1-204ENST00000570902 PI4K2BG5E9Z4 385 aa22.08■■□□□ 1.13
SCARF1-204ENST00000570902 RSPH10BP0C881 870 aa22.08■■□□□ 1.13
SCARF1-204ENST00000570902 TGFB3P10600 412 aa22.08■■□□□ 1.13
SCARF1-204ENST00000570902 MYCLP12524 364 aaPredicted RBP22.08■■□□□ 1.13
SCARF1-204ENST00000570902 THPOP40225 353 aa22.08■■□□□ 1.13
SCARF1-204ENST00000570902 ZNF200P98182 395 aaPredicted RBP22.08■■□□□ 1.13
SCARF1-204ENST00000570902 CWC27Q6UX04 472 aaKnown RBP22.08■■□□□ 1.13
SCARF1-204ENST00000570902 STOX1Q6ZVD7 989 aa22.08■■□□□ 1.13
SCARF1-204ENST00000570902 SERINC5Q86VE9 423 aa22.08■■□□□ 1.13
SCARF1-204ENST00000570902 CNNM2Q9H8M5 875 aa22.08■■□□□ 1.13
SCARF1-204ENST00000570902 DIAPH3Q9NSV4 1193 aa22.08■■□□□ 1.13
SCARF1-204ENST00000570902 OPLAHO14841 1288 aa22.07■■□□□ 1.12
SCARF1-204ENST00000570902 GGPS1O95749 300 aa22.07■■□□□ 1.12
SCARF1-204ENST00000570902 PTPROQ16827 1216 aa22.07■■□□□ 1.12
SCARF1-204ENST00000570902 HSDL1Q3SXM5 330 aa22.07■■□□□ 1.12
SCARF1-204ENST00000570902 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.07■■□□□ 1.12
SCARF1-204ENST00000570902 VSIG10LQ86VR7 867 aa22.07■■□□□ 1.12
SCARF1-204ENST00000570902 MYOCDQ8IZQ8 938 aa22.07■■□□□ 1.12
SCARF1-204ENST00000570902 DBF4BQ8NFT6 615 aa22.07■■□□□ 1.12
SCARF1-204ENST00000570902 KHSRPQ92945 711 aaKnown RBP eCLIP22.07■■□□□ 1.12
SCARF1-204ENST00000570902 SAMD11Q96NU1 681 aa22.07■■□□□ 1.12
SCARF1-204ENST00000570902 DSCC1Q9BVC3 393 aa22.07■■□□□ 1.12
SCARF1-204ENST00000570902 HIP1O00291 1037 aa22.06■■□□□ 1.12
SCARF1-204ENST00000570902 RGS20O76081 388 aa22.06■■□□□ 1.12
SCARF1-204ENST00000570902 KCNA5P22460 613 aa22.06■■□□□ 1.12
SCARF1-204ENST00000570902 HTRA4P83105 476 aaPredicted RBP22.06■■□□□ 1.12
SCARF1-204ENST00000570902 TRAF1Q13077 416 aa22.06■■□□□ 1.12
SCARF1-204ENST00000570902 MKRN4PQ13434 485 aaPredicted RBP22.06■■□□□ 1.12
SCARF1-204ENST00000570902 PUS10Q3MIT2 529 aaKnown RBP22.06■■□□□ 1.12
SCARF1-204ENST00000570902 IFIT1BQ5T764 474 aaKnown RBP22.06■■□□□ 1.12
SCARF1-204ENST00000570902 SP7Q8TDD2 431 aaPredicted RBP22.06■■□□□ 1.12
SCARF1-204ENST00000570902 C17orf80Q9BSJ5 609 aa22.06■■□□□ 1.12
SCARF1-204ENST00000570902 MLXIPQ9HAP2 919 aa22.06■■□□□ 1.12
SCARF1-204ENST00000570902 C11orf16Q9NQ32 467 aa22.06■■□□□ 1.12
SCARF1-204ENST00000570902 PCDHA1Q9Y5I3 950 aa22.06■■□□□ 1.12
SCARF1-204ENST00000570902 C17orf102A2RUQ5 167 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 KLRF2D3W0D1 207 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 ZBTB5O15062 677 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 CCND2P30279 289 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 PGM5Q15124 567 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 PLEKHG4Q58EX7 1191 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 FAM178BQ8IXR5 827 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 GJD3Q8N144 294 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 ATP6V0A1Q93050 837 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 MRPL38Q96DV4 380 aaKnown RBP22.05■■□□□ 1.12
SCARF1-204ENST00000570902 MTMR8Q96EF0 704 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 C16orf70Q9BSU1 422 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 CD320Q9NPF0 282 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 MYH7BA7E2Y1 1941 aa22.05■■□□□ 1.12
SCARF1-204ENST00000570902 FAM86C2PA6NEL3 165 aa22.04■■□□□ 1.12
SCARF1-204ENST00000570902 CAND2O75155 1236 aa22.04■■□□□ 1.12
SCARF1-204ENST00000570902 UBA1P22314 1058 aaKnown RBP22.04■■□□□ 1.12
SCARF1-204ENST00000570902 HIC1Q14526 733 aa22.04■■□□□ 1.12
SCARF1-204ENST00000570902 TIGD5Q53EQ6 642 aa22.04■■□□□ 1.12
SCARF1-204ENST00000570902 STAG2Q8N3U4 1231 aa22.04■■□□□ 1.12
SCARF1-204ENST00000570902 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.04■■□□□ 1.12
SCARF1-204ENST00000570902 SEPT8Q92599 483 aa22.04■■□□□ 1.12
SCARF1-204ENST00000570902 OSBPL3Q9H4L5 887 aa22.04■■□□□ 1.12
SCARF1-204ENST00000570902 H3BRB1 525 aa22.03■■□□□ 1.12
SCARF1-204ENST00000570902 SORBS3O60504 671 aa22.03■■□□□ 1.12
SCARF1-204ENST00000570902 HOXA13P31271 388 aaPredicted RBP22.03■■□□□ 1.12
SCARF1-204ENST00000570902 SP2Q02086 613 aa22.03■■□□□ 1.12
SCARF1-204ENST00000570902 AAMPQ13685 434 aa22.03■■□□□ 1.12
SCARF1-204ENST00000570902 PTCRAQ6ISU1 281 aaPredicted RBP22.03■■□□□ 1.12
SCARF1-204ENST00000570902 YME1L1Q96TA2 773 aa22.03■■□□□ 1.12
SCARF1-204ENST00000570902 TUT1Q9H6E5 874 aaKnown RBP22.03■■□□□ 1.12
SCARF1-204ENST00000570902 GCOM1H8Y6P7 765 aaPredicted RBP22.02■■□□□ 1.12
SCARF1-204ENST00000570902 PPP1R11O60927 126 aaPredicted RBP22.02■■□□□ 1.12
SCARF1-204ENST00000570902 POLR2MP0CAP2 368 aa22.02■■□□□ 1.12
SCARF1-204ENST00000570902 HOXC8P31273 242 aa22.02■■□□□ 1.12
SCARF1-204ENST00000570902 SSTR3P32745 418 aaPredicted RBP22.02■■□□□ 1.12
SCARF1-204ENST00000570902 GNPTABQ3T906 1256 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms