RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 ATP2B2Q01814 1243 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 MTMR3Q13615 1198 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 NAB2Q15742 525 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 AGBL2Q5U5Z8 902 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 BRIP1Q9BX63 1249 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 HAUS2Q9NVX0 235 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 MYH1P12882 1939 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 FAM205AQ6ZU69 1335 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 DNM1LO00429 736 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 CES2O00748 559 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 PDHBP11177 359 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 FCER1AP12319 257 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 SCTRP47872 440 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 PPP2R2AP63151 447 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 HLFQ16534 295 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 MEI1Q5TIA1 1274 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 FMNL3Q8IVF7 1028 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 USP38Q8NB14 1042 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 TAF4BQ92750 862 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 TMEM60Q9H2L4 133 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 TPX2Q9ULW0 747 aaKnown RBP16.96■□□□□ 0.31
SMG6-207ENST00000570756 PCDHGC5Q9Y5F6 944 aa16.96■□□□□ 0.31
SMG6-207ENST00000570756 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.3
SMG6-207ENST00000570756 SSBP05455 408 aaKnown RBP eCLIP16.96■□□□□ 0.3
SMG6-207ENST00000570756 GHRP10912 638 aa16.96■□□□□ 0.3
SMG6-207ENST00000570756 DNA2P51530 1060 aa16.96■□□□□ 0.3
SMG6-207ENST00000570756 SATB1Q01826 763 aa16.96■□□□□ 0.3
SMG6-207ENST00000570756 SYN2Q92777 582 aaPredicted RBP16.96■□□□□ 0.3
SMG6-207ENST00000570756 CARD10Q9BWT7 1032 aa16.96■□□□□ 0.3
SMG6-207ENST00000570756 SEMA6BQ9H3T3 888 aa16.96■□□□□ 0.3
SMG6-207ENST00000570756 SWAP70Q9UH65 585 aa16.96■□□□□ 0.3
SMG6-207ENST00000570756 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.96■□□□□ 0.3
SMG6-207ENST00000570756 LEMD3Q9Y2U8 911 aa16.96■□□□□ 0.3
SMG6-207ENST00000570756 ADAMTS3O15072 1205 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 DNAJC8O75937 253 aaPredicted RBP16.95■□□□□ 0.3
SMG6-207ENST00000570756 FTCDO95954 541 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 SERPING1P05155 500 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 BCAMP50895 628 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 CLNS1AP54105 237 aaKnown RBP16.95■□□□□ 0.3
SMG6-207ENST00000570756 KDM4CQ9H3R0 1056 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 ANKRD36CQ5JPF3 1778 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 H0YGN5 161 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 ZNF844Q08AG5 666 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 HGSNATQ68CP4 663 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 GALNT17Q6IS24 598 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 ADGRA1Q86SQ6 560 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 KIAA0895Q8NCT3 520 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 NFS1Q9Y697 457 aa16.95■□□□□ 0.3
SMG6-207ENST00000570756 FLT1P17948 1338 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 SFMBT2Q5VUG0 894 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 FAM228AQ86W67 206 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 KLHL7Q8IXQ5 586 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 TATDN2Q93075 761 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 TMEM59LQ9UK28 342 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 SMIM22K7EJ46 135 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 NKRFO15226 690 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMG6-207ENST00000570756 CALRP27797 417 aaKnown RBP16.94■□□□□ 0.3
SMG6-207ENST00000570756 LRRC63Q05C16 580 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 EHHADHQ08426 723 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 QPCTQ16769 361 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 CPLX4Q7Z7G2 160 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 DNAJC10Q8IXB1 793 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 RASGRP4Q8TDF6 673 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 LRRC15Q8TF66 581 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 TBC1D22AQ8WUA7 517 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 CEP72Q9P209 647 aa16.94■□□□□ 0.3
SMG6-207ENST00000570756 BCCIPQ9P287 314 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMG6-207ENST00000570756 CYP2D7A0A087X1C5 515 aa16.93■□□□□ 0.3
SMG6-207ENST00000570756 SNAP23O00161 211 aa16.93■□□□□ 0.3
SMG6-207ENST00000570756 ORC4O43929 436 aa16.93■□□□□ 0.3
SMG6-207ENST00000570756 MGRN1O60291 552 aa16.93■□□□□ 0.3
SMG6-207ENST00000570756 VEGFAP15692 232 aaPredicted RBP16.93■□□□□ 0.3
SMG6-207ENST00000570756 HOXA7P31268 230 aaPredicted RBP16.93■□□□□ 0.3
SMG6-207ENST00000570756 ERVK-9P63128 1117 aa16.93■□□□□ 0.3
SMG6-207ENST00000570756 TRADDQ15628 312 aa16.93■□□□□ 0.3
SMG6-207ENST00000570756 INF2Q27J81 1249 aa16.93■□□□□ 0.3
SMG6-207ENST00000570756 STAG2Q8N3U4 1231 aa16.93■□□□□ 0.3
SMG6-207ENST00000570756 HVCN1Q96D96 273 aa16.93■□□□□ 0.3
SMG6-207ENST00000570756 FAM212AQ96EL1 285 aa16.93■□□□□ 0.3
SMG6-207ENST00000570756 RIOK1Q9BRS2 568 aaKnown RBP16.93■□□□□ 0.3
SMG6-207ENST00000570756 CNOT10Q9H9A5 744 aaKnown RBP16.93■□□□□ 0.3
SMG6-207ENST00000570756 ABCF2Q9UG63 623 aa16.93■□□□□ 0.3
SMG6-207ENST00000570756 BAZ2AQ9UIF9 1905 aaKnown RBP16.93■□□□□ 0.3
SMG6-207ENST00000570756 CCDC189A1A4V9 331 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 M0R2N6 131 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 ZPR1O75312 459 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 TMOD1P28289 359 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 GBP2P32456 591 aaPredicted RBP16.92■□□□□ 0.3
SMG6-207ENST00000570756 FAM98CQ17RN3 349 aaKnown RBP16.92■□□□□ 0.3
SMG6-207ENST00000570756 EP400NLQ6ZTU2 488 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 TMC4Q7Z404 712 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 DAGLBQ8NCG7 672 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 RAPGEF5Q92565 580 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 GPKOWQ92917 476 aaPredicted RBP eCLIP16.92■□□□□ 0.3
SMG6-207ENST00000570756 RSRC1Q96IZ7 334 aaKnown RBP16.92■□□□□ 0.3
SMG6-207ENST00000570756 SLC39A2Q9NP94 309 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 TMOD3Q9NYL9 352 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 PCDHA6Q9UN73 950 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 PCDHA8Q9Y5H6 950 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms