RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 ZNF286BP0CG31 522 aa17.4■□□□□ 0.38
RAB40B-203ENST00000570676 CALM1P0DP23 149 aa17.4■□□□□ 0.38
RAB40B-203ENST00000570676 CALM2P0DP24 149 aa17.4■□□□□ 0.38
RAB40B-203ENST00000570676 CALM3P0DP25 149 aa17.4■□□□□ 0.38
RAB40B-203ENST00000570676 GNAQP50148 359 aa17.4■□□□□ 0.38
RAB40B-203ENST00000570676 MRPS9P82933 396 aaKnown RBP17.4■□□□□ 0.38
RAB40B-203ENST00000570676 TMTC3Q6ZXV5 915 aa17.4■□□□□ 0.38
RAB40B-203ENST00000570676 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
RAB40B-203ENST00000570676 TET1Q8NFU7 2136 aa17.4■□□□□ 0.38
RAB40B-203ENST00000570676 TCEANC2Q96MN5 208 aa17.4■□□□□ 0.38
RAB40B-203ENST00000570676 CDX2Q99626 313 aaPredicted RBP17.4■□□□□ 0.38
RAB40B-203ENST00000570676 PDRG1Q9NUG6 133 aa17.4■□□□□ 0.38
RAB40B-203ENST00000570676 SEC63Q9UGP8 760 aaKnown RBP17.4■□□□□ 0.38
RAB40B-203ENST00000570676 SLC12A7Q9Y666 1083 aa17.4■□□□□ 0.38
RAB40B-203ENST00000570676 GRXCR1A8MXD5 290 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 HAS3O00219 553 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 PIK3CDO00329 1044 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 MEIS2O14770 477 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 GGPS1O95749 300 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 EXOSC10Q01780 885 aaKnown RBP17.39■□□□□ 0.37
RAB40B-203ENST00000570676 SP2Q02086 613 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 LAMC2Q13753 1193 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 DGKDQ16760 1214 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 HSDL1Q3SXM5 330 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 MYSM1Q5VVJ2 828 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 KCNV1Q6PIU1 500 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 APOA5Q6Q788 366 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 USP17L6PQ6QN14 398 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 DHX37Q8IY37 1157 aaKnown RBP17.39■□□□□ 0.37
RAB40B-203ENST00000570676 INPP4AQ96PE3 977 aaPredicted RBP17.39■□□□□ 0.37
RAB40B-203ENST00000570676 PBX4Q9BYU1 374 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 CNTNAP5Q8WYK1 1306 aa17.39■□□□□ 0.37
RAB40B-203ENST00000570676 PITPNM1O00562 1244 aa17.38■□□□□ 0.37
RAB40B-203ENST00000570676 ST18O60284 1047 aa17.38■□□□□ 0.37
RAB40B-203ENST00000570676 FGBP02675 491 aa17.38■□□□□ 0.37
RAB40B-203ENST00000570676 PBX2P40425 430 aa17.38■□□□□ 0.37
RAB40B-203ENST00000570676 FGD1P98174 961 aa17.38■□□□□ 0.37
RAB40B-203ENST00000570676 SEMA3FQ13275 785 aa17.38■□□□□ 0.37
RAB40B-203ENST00000570676 CELF3Q5SZQ8 465 aaKnown RBP17.38■□□□□ 0.37
RAB40B-203ENST00000570676 GDF6Q6KF10 455 aaPredicted RBP17.38■□□□□ 0.37
RAB40B-203ENST00000570676 GTF2IRD1Q9UHL9 959 aa17.38■□□□□ 0.37
RAB40B-203ENST00000570676 RBM19Q9Y4C8 960 aaKnown RBP17.38■□□□□ 0.37
RAB40B-203ENST00000570676 hCG_1642624A0A1W2PR95 340 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 SORBS3O60504 671 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 TGFB3P10600 412 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 ICAM3P32942 547 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 PSEN2P49810 448 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 CHMP4BP1P59074 171 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 MFSD10Q14728 455 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 PTGISQ16647 500 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 Q6ZUG5 572 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 OTOP2Q7RTS6 562 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 FANCBQ8NB91 859 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 IL27Q8NEV9 243 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 SMARCC2Q8TAQ2 1214 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 MYLIPQ8WY64 445 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 DHX38Q92620 1227 aaKnown RBP17.37■□□□□ 0.37
RAB40B-203ENST00000570676 SPATA33Q96N06 139 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 MTIF3Q9H2K0 278 aaKnown RBP17.37■□□□□ 0.37
RAB40B-203ENST00000570676 BCAS3Q9H6U6 928 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 BRPF3Q9ULD4 1205 aa17.37■□□□□ 0.37
RAB40B-203ENST00000570676 COL6A3P12111 3177 aa17.36■□□□□ 0.37
RAB40B-203ENST00000570676 STAM2O75886 525 aa17.36■□□□□ 0.37
RAB40B-203ENST00000570676 PFKMP08237 780 aa17.36■□□□□ 0.37
RAB40B-203ENST00000570676 RBL2Q08999 1139 aa17.36■□□□□ 0.37
RAB40B-203ENST00000570676 KIAA0753Q2KHM9 967 aa17.36■□□□□ 0.37
RAB40B-203ENST00000570676 GNPTABQ3T906 1256 aa17.36■□□□□ 0.37
RAB40B-203ENST00000570676 PCNX4Q63HM2 1172 aa17.36■□□□□ 0.37
RAB40B-203ENST00000570676 RPUSD2Q8IZ73 545 aaKnown RBP17.36■□□□□ 0.37
RAB40B-203ENST00000570676 CUL5Q93034 780 aa17.36■□□□□ 0.37
RAB40B-203ENST00000570676 TIFAQ96CG3 184 aa17.36■□□□□ 0.37
RAB40B-203ENST00000570676 ALG1Q9BT22 464 aa17.36■□□□□ 0.37
RAB40B-203ENST00000570676 KATNAL1Q9BW62 490 aa17.36■□□□□ 0.37
RAB40B-203ENST00000570676 HDAC6Q9UBN7 1215 aa17.36■□□□□ 0.37
RAB40B-203ENST00000570676 CDH23Q9H251 3354 aa17.35■□□□□ 0.37
RAB40B-203ENST00000570676 IQCF3P0C7M6 154 aa17.35■□□□□ 0.37
RAB40B-203ENST00000570676 RFC2P35250 354 aa17.35■□□□□ 0.37
RAB40B-203ENST00000570676 AK2P54819 239 aa17.35■□□□□ 0.37
RAB40B-203ENST00000570676 FUT2Q10981 343 aa17.35■□□□□ 0.37
RAB40B-203ENST00000570676 DEFB128Q7Z7B8 93 aa17.35■□□□□ 0.37
RAB40B-203ENST00000570676 CCDC82Q8N4S0 544 aa17.35■□□□□ 0.37
RAB40B-203ENST00000570676 SLC17A8Q8NDX2 589 aa17.35■□□□□ 0.37
RAB40B-203ENST00000570676 CAGE1Q8TC20 777 aa17.35■□□□□ 0.37
RAB40B-203ENST00000570676 C16orf70Q9BSU1 422 aa17.35■□□□□ 0.37
RAB40B-203ENST00000570676 NOD1Q9Y239 953 aa17.35■□□□□ 0.37
RAB40B-203ENST00000570676 LAMA2P24043 3122 aaKnown RBP17.35■□□□□ 0.37
RAB40B-203ENST00000570676 SPATA31C2B4DYI2 1134 aa17.34■□□□□ 0.37
RAB40B-203ENST00000570676 FIBPO43427 364 aa17.34■□□□□ 0.37
RAB40B-203ENST00000570676 PPFIA4O75335 1185 aa17.34■□□□□ 0.37
RAB40B-203ENST00000570676 SIP14410 1827 aa17.34■□□□□ 0.37
RAB40B-203ENST00000570676 BFSP2Q13515 415 aa17.34■□□□□ 0.37
RAB40B-203ENST00000570676 TOB2Q14106 344 aaPredicted RBP17.34■□□□□ 0.37
RAB40B-203ENST00000570676 HIC1Q14526 733 aa17.34■□□□□ 0.37
RAB40B-203ENST00000570676 GRIN2CQ14957 1233 aa17.34■□□□□ 0.37
RAB40B-203ENST00000570676 ANKRD1Q15327 319 aa17.34■□□□□ 0.37
RAB40B-203ENST00000570676 UBE2SQ16763 222 aa17.34■□□□□ 0.37
RAB40B-203ENST00000570676 AFAP1L1Q8TED9 768 aa17.34■□□□□ 0.37
RAB40B-203ENST00000570676 ZNF576Q9H609 170 aa17.34■□□□□ 0.37
RAB40B-203ENST00000570676 RBM28Q9NW13 759 aaKnown RBP17.34■□□□□ 0.37
RAB40B-203ENST00000570676 RTEL1Q9NZ71 1219 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms