RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 BAG1Q99933 345 aaPredicted RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 NAA15Q9BXJ9 866 aaKnown RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 DEFB129Q9H1M3 183 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 KCNMB3Q9NPA1 279 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 GINM1Q9NU53 330 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 TMOD2Q9NZR1 351 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 DDX25Q9UHL0 483 aaKnown RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 PCDHA12Q9UN75 941 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 TMX2Q9Y320 296 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.03□□□□□ -1.448e-15■□□□□ 8.8
SF3B3-213ENST00000569687 ZNF646O15015 1829 aaPredicted RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 COL4A5P29400 1685 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-213ENST00000569687 A0A1W2PRG0 241 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 RCCD1A6NED2 376 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 MYMKA6NI61 221 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 USP27XA6NNY8 438 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 KCNJ18B7U540 433 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 PSMA7O14818 248 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 N4BP3O15049 544 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 SLC37A4O43826 429 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 TDP2O95551 362 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 GH2P01242 217 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 SLURP2P0DP57 97 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 NDUFV2P19404 249 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 SREBF1P36956 1147 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 TNNI2P48788 182 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 PRSS12P56730 875 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 ZNF280AP59817 542 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-213ENST00000569687 CXCL9Q07325 125 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 KCNA1Q09470 495 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 STK4Q13043 487 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 TRIM14Q14142 442 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 KCNJ12Q14500 433 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 CDC37Q16543 378 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-213ENST00000569687 TRIM65Q6PJ69 517 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 PPFIBP1Q86W92 1011 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 FBXO11Q86XK2 927 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 SLFN12Q8IYM2 578 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 SMYD4Q8IYR2 804 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-213ENST00000569687 LARGE2Q8N3Y3 721 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 GUF1Q8N442 669 aaKnown RBP6.02□□□□□ -1.45
SF3B3-213ENST00000569687 NLGN2Q8NFZ4 835 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 RASSF8Q8NHQ8 419 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 ADAMTS19Q8TE59 1207 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 CHURC1Q8WUH1 139 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 RAD54LQ92698 747 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 P2RX5Q93086 422 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 C16orf45Q96MC5 204 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-213ENST00000569687 FAM20AQ96MK3 541 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 CSRNP1Q96S65 589 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 DUSP9Q99956 384 aaKnown RBP6.02□□□□□ -1.45
SF3B3-213ENST00000569687 NT5C3AQ9H0P0 336 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 L2HGDHQ9H9P8 463 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.02□□□□□ -1.45
SF3B3-213ENST00000569687 ZNF277Q9NRM2 450 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-213ENST00000569687 CTNND2Q9UQB3 1225 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 GDAQ9Y2T3 454 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 CNTNAP1P78357 1384 aa6.02□□□□□ -1.45
SF3B3-213ENST00000569687 ABCB11O95342 1321 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 LTBP3Q9NS15 1303 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 FER1L6Q2WGJ9 1857 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 SCN9AQ15858 1988 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 FAM196BA6NMK8 535 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 LGALS16A8MUM7 142 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 USP17L15C9J2P7 530 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 USP17L13C9JLJ4 530 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 USP17L11C9JVI0 530 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 USP17L18D6R9N7 530 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 USP17L22D6RA61 530 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 USP17L17D6RBQ6 530 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 USP17L19D6RCP7 530 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 USP17L20D6RJB6 530 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 NFKBIEO00221 500 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 RRP9O43818 475 aaKnown RBP6.01□□□□□ -1.45
SF3B3-213ENST00000569687 RAD17O75943 681 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 FGFR1OPO95684 399 aaKnown RBP6.01□□□□□ -1.45
SF3B3-213ENST00000569687 RPS12P25398 132 aaKnown RBP6.01□□□□□ -1.45
SF3B3-213ENST00000569687 CAP2P40123 477 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 DNM2P50570 870 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 ASIC1P78348 528 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 RBL2Q08999 1139 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 USP17L24Q0WX57 530 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 UBE2SQ16763 222 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 SHROOM1Q2M3G4 852 aaPredicted RBP6.01□□□□□ -1.45
SF3B3-213ENST00000569687 FIGNQ5HY92 759 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 ANKRD40Q6AI12 368 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 USP17L6PQ6QN14 398 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 FAM160B2Q86V87 743 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 TMTC1Q8IUR5 882 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 CNGA4Q8IV77 575 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 FAM114A1Q8IWE2 563 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 NIM1KQ8IY84 436 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 SAMD3Q8N6K7 520 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 MB21D1Q8N884 522 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 ETNPPLQ8TBG4 499 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 LARP4BQ92615 738 aaKnown RBP6.01□□□□□ -1.45
SF3B3-213ENST00000569687 DNAJC19Q96DA6 116 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 IQCDQ96DY2 449 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 CDK5RAP3Q96JB5 506 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms