RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 FRMPD3Q5JV73 1810 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 LCTP09848 1927 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 A6NJR5 290 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 STXBP3O00186 592 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 KIAA0355O15063 1070 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 ADAMTS3O15072 1205 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 KPNA6O60684 536 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 ARIH2O95376 493 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 DEXIO95424 95 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 GH1P01241 217 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 SCG2P13521 617 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 CCND2P30279 289 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 FOSBP53539 338 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 PSMC6P62333 389 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 CPLX2Q6PUV4 134 aaKnown RBP10.76□□□□□ -0.69
UBR1-210ENST00000569337 VSIG10LQ86VR7 867 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 SLC43A3Q8NBI5 491 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 PSTPIP2Q9H939 334 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 SMC3Q9UQE7 1217 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.76□□□□□ -0.69
UBR1-210ENST00000569337 MRVI1Q9Y6F6 885 aa10.76□□□□□ -0.69
UBR1-210ENST00000569337 ITGB8P26012 769 aa10.75□□□□□ -0.69
UBR1-210ENST00000569337 HMGN5P82970 282 aaKnown RBP10.75□□□□□ -0.69
UBR1-210ENST00000569337 PURAQ00577 322 aaKnown RBP10.75□□□□□ -0.69
UBR1-210ENST00000569337 KCNV1Q6PIU1 500 aa10.75□□□□□ -0.69
UBR1-210ENST00000569337 USP17L6PQ6QN14 398 aa10.75□□□□□ -0.69
UBR1-210ENST00000569337 HEATR3Q7Z4Q2 680 aa10.75□□□□□ -0.69
UBR1-210ENST00000569337 FAM126BQ8IXS8 530 aa10.75□□□□□ -0.69
UBR1-210ENST00000569337 DHX37Q8IY37 1157 aaKnown RBP10.75□□□□□ -0.69
UBR1-210ENST00000569337 TRIM22Q8IYM9 498 aa10.75□□□□□ -0.69
UBR1-210ENST00000569337 IL31RAQ8NI17 732 aa10.75□□□□□ -0.69
UBR1-210ENST00000569337 AFG1LQ8WV93 481 aa10.75□□□□□ -0.69
UBR1-210ENST00000569337 IPO9Q96P70 1041 aaKnown RBP10.75□□□□□ -0.69
UBR1-210ENST00000569337 MTG1Q9BT17 334 aaPredicted RBP10.75□□□□□ -0.69
UBR1-210ENST00000569337 DDX41Q9UJV9 622 aaKnown RBP10.75□□□□□ -0.69
UBR1-210ENST00000569337 GRIN2DO15399 1336 aa10.75□□□□□ -0.69
UBR1-210ENST00000569337 ALPK3Q96L96 1907 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 PIK3CDO00329 1044 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 MEIS2O14770 477 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 STAM2O75886 525 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 RGS20O76081 388 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 TIMP1P01033 207 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 CD4P01730 458 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 TGFB3P10600 412 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 AKAP17AQ02040 695 aaKnown RBP10.74□□□□□ -0.69
UBR1-210ENST00000569337 ARHGAP1Q07960 439 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 LAMC2Q13753 1193 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 NPY5RQ15761 445 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 LRIT3Q3SXY7 679 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 GNPTABQ3T906 1256 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 ZFP91Q96JP5 570 aaPredicted RBP10.74□□□□□ -0.69
UBR1-210ENST00000569337 ALG1Q9BT22 464 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 BARHL2Q9NY43 387 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 VPS54Q9P1Q0 977 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 TBX21Q9UL17 535 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 KCNJ14Q9UNX9 436 aa10.74□□□□□ -0.69
UBR1-210ENST00000569337 SOX1O00570 391 aaPredicted RBP10.73□□□□□ -0.69
UBR1-210ENST00000569337 B4GALT4O60513 344 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 HSP90AA1P07900 732 aaKnown RBP10.73□□□□□ -0.69
UBR1-210ENST00000569337 MMP3P08254 477 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 SUPT20HL2P0C7V6 817 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 DDIT3P35638 169 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 NAPAP54920 295 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 CHMP4BP1P59074 171 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 GUCY1B3Q02153 619 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 FPGSQ05932 587 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 PKP1Q13835 747 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 DGKDQ16760 1214 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 NBPF20Q3BBV1 942 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 FAM47CQ5HY64 1035 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 KRT40Q6A162 431 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 MFSD5Q6N075 450 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 XRRA1Q6P2D8 792 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 EMID1Q96A84 441 aaPredicted RBP10.73□□□□□ -0.69
UBR1-210ENST00000569337 LRCH3Q96II8 777 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 PPP1R12CQ9BZL4 782 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 TRPV6Q9H1D0 765 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 RTEL1Q9NZ71 1219 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 MYH7BA7E2Y1 1941 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 CEP290O15078 2479 aa10.73□□□□□ -0.69
UBR1-210ENST00000569337 MCM3APO60318 1980 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 RANBP2P49792 3224 aaKnown RBP10.72□□□□□ -0.69
UBR1-210ENST00000569337 SPDYE3A6NKU9 549 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 hCG_1984214I3L0E3 225 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 SORBS3O60504 671 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 GGPS1O95749 300 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 SYT1P21579 422 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 MRPS9P82933 396 aaKnown RBP10.72□□□□□ -0.69
UBR1-210ENST00000569337 SHHQ15465 462 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 UBE2SQ16763 222 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 CELF3Q5SZQ8 465 aaKnown RBP10.72□□□□□ -0.69
UBR1-210ENST00000569337 MYSM1Q5VVJ2 828 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 PCNX4Q63HM2 1172 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 LARP1BQ659C4 914 aaKnown RBP10.72□□□□□ -0.69
UBR1-210ENST00000569337 TMEM199Q8N511 208 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 ZNF713Q8N859 430 aaPredicted RBP10.72□□□□□ -0.69
UBR1-210ENST00000569337 FAM184AQ8NB25 1140 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 FBXO18Q8NFZ0 1043 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 PPTC7Q8NI37 304 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 OXER1Q8TDS5 423 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms