RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 MAFBQ9Y5Q3 323 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-219ENST00000569136 HTTP42858 3142 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 PFASO15067 1338 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 ZNF536O15090 1300 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 FRMPD2Q68DX3 1309 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-219ENST00000569136 DNAJC25-GNG10A0A024R161 153 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 ADH1AP07327 375 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 BMP2P12643 396 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 GNAQP50148 359 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 CCDC174Q6PII3 467 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 MAMDC4Q6UXC1 1216 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 CYP2U1Q7Z449 544 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 MB21D2Q8IYB1 491 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-219ENST00000569136 MEIOBQ8N635 442 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 CHMP4CQ96CF2 233 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 LZTS2Q9BRK4 669 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 CCPG1Q9ULG6 757 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 CNPY2Q9Y2B0 182 aa10.69□□□□□ -0.7
CAPN3-219ENST00000569136 LOC285556D6RIA3 1793 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 WDR19Q8NEZ3 1342 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 SYNGAP1Q96PV0 1343 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 LOC102724159A0A0B4J2E5 919 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 ASB14A6NK59 587 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 KLRF2D3W0D1 207 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 SEPT4O43236 478 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 PRC1O43663 620 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 LZTS3O60299 673 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-219ENST00000569136 PGK2P07205 417 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 GOLGA8HP0CJ92 632 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 CALM1P0DP23 149 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 CALM2P0DP24 149 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 CALM3P0DP25 149 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 ALAS1P13196 640 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 SMARCA1P28370 1054 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 KIF5BP33176 963 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 CYP2C19P33261 490 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 LIFRP42702 1097 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 PWP2Q15269 919 aaKnown RBP10.68□□□□□ -0.7
CAPN3-219ENST00000569136 MRPL14Q6P1L8 145 aaKnown RBP10.68□□□□□ -0.7
CAPN3-219ENST00000569136 STOX1Q6ZVD7 989 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 Q6ZVU0 165 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 DHX32Q7L7V1 743 aaKnown RBP10.68□□□□□ -0.7
CAPN3-219ENST00000569136 CRIPAKQ8N1N5 446 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 ARRDC4Q8NCT1 418 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 KCNB2Q92953 911 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 NEK1Q96PY6 1258 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 PURBQ96QR8 312 aaKnown RBP10.68□□□□□ -0.7
CAPN3-219ENST00000569136 TSEN34Q9BSV6 310 aaKnown RBP10.68□□□□□ -0.7
CAPN3-219ENST00000569136 UBA5Q9GZZ9 404 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 ZNF395Q9H8N7 513 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-219ENST00000569136 RNF146Q9NTX7 359 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 FLRT1Q9NZU1 646 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 DACH1Q9UI36 760 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 OGDHLQ9ULD0 1010 aa10.68□□□□□ -0.7
CAPN3-219ENST00000569136 PTPRFP10586 1907 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 B4DLN1 442 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 FARP2O94887 1054 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-219ENST00000569136 PSMA5P28066 241 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 CNGA1P29973 690 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 MRPL12P52815 198 aaKnown RBP10.67□□□□□ -0.7
CAPN3-219ENST00000569136 SNAP25P60880 206 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 TROAPQ12815 778 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 SYNE3Q6ZMZ3 975 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 NFXL1Q6ZNB6 911 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 NECAB2Q7Z6G3 386 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 MCF2L2Q86YR7 1114 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 ADGRF4Q8IZF3 695 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 LINC00528Q8N1L1 170 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 SAMD3Q8N6K7 520 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 MPHOSPH6Q99547 160 aaKnown RBP10.67□□□□□ -0.7
CAPN3-219ENST00000569136 HTATIP2Q9BUP3 242 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 HOMER2Q9NSB8 354 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 ADD3Q9UEY8 706 aaKnown RBP10.67□□□□□ -0.7
CAPN3-219ENST00000569136 DDX20Q9UHI6 824 aaKnown RBP10.67□□□□□ -0.7
CAPN3-219ENST00000569136 MRPL11Q9Y3B7 192 aaKnown RBP10.67□□□□□ -0.7
CAPN3-219ENST00000569136 TAF6LQ9Y6J9 622 aa10.67□□□□□ -0.7
CAPN3-219ENST00000569136 CCDC69A6NI79 296 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 DHX16O60231 1041 aaKnown RBP10.66□□□□□ -0.7
CAPN3-219ENST00000569136 DDAH1O94760 285 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 CYBAP13498 195 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 CCND3P30281 292 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-219ENST00000569136 EXOSC10Q01780 885 aaKnown RBP10.66□□□□□ -0.7
CAPN3-219ENST00000569136 GRM4Q14833 912 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 CHST3Q7LGC8 479 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 UBE2Q1Q7Z7E8 422 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 SGMS1Q86VZ5 419 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 FAM133AQ8N9E0 248 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 ABHD16BQ9H3Z7 469 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 JMJD4Q9H9V9 463 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 LY9Q9HBG7 655 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 VAT1LQ9HCJ6 419 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 ATP13A2Q9NQ11 1180 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 A1CFQ9NQ94 594 aaKnown RBP10.66□□□□□ -0.7
CAPN3-219ENST00000569136 MAP3K20Q9NYL2 800 aaKnown RBP10.66□□□□□ -0.7
CAPN3-219ENST00000569136 CYP39A1Q9NYL5 469 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 MAD2L2Q9UI95 211 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 FAM184BQ9ULE4 1060 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 SLC12A7Q9Y666 1083 aa10.66□□□□□ -0.7
CAPN3-219ENST00000569136 ATAD5Q96QE3 1844 aa10.65□□□□□ -0.7
CAPN3-219ENST00000569136 ABCB11O95342 1321 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms