RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 RNPC3Q96LT9 517 aaKnown RBP29.08■■■□□ 2.25
CCNF-205ENST00000569093 SPATA33Q96N06 139 aa29.08■■■□□ 2.25
CCNF-205ENST00000569093 INPP4AQ96PE3 977 aaPredicted RBP29.08■■■□□ 2.25
CCNF-205ENST00000569093 SUPT20HL2P0C7V6 817 aa29.07■■■□□ 2.24
CCNF-205ENST00000569093 PSMA5P28066 241 aa29.07■■■□□ 2.24
CCNF-205ENST00000569093 METAP2P50579 478 aaKnown RBP eCLIP29.07■■■□□ 2.24
CCNF-205ENST00000569093 SEMA3FQ13275 785 aa29.07■■■□□ 2.24
CCNF-205ENST00000569093 PCNX4Q63HM2 1172 aa29.07■■■□□ 2.24
CCNF-205ENST00000569093 DEFB123Q8N688 67 aa29.07■■■□□ 2.24
CCNF-205ENST00000569093 WNT8AQ9H1J5 351 aa29.07■■■□□ 2.24
CCNF-205ENST00000569093 SPATA31C2B4DYI2 1134 aa29.06■■■□□ 2.24
CCNF-205ENST00000569093 STAM2O75886 525 aa29.06■■■□□ 2.24
CCNF-205ENST00000569093 ZNF286BP0CG31 522 aa29.06■■■□□ 2.24
CCNF-205ENST00000569093 ICAM3P32942 547 aa29.06■■■□□ 2.24
CCNF-205ENST00000569093 RCAN1P53805 252 aa29.06■■■□□ 2.24
CCNF-205ENST00000569093 GNPTABQ3T906 1256 aa29.06■■■□□ 2.24
CCNF-205ENST00000569093 TMEM240Q5SV17 173 aa29.06■■■□□ 2.24
CCNF-205ENST00000569093 MLXIPQ9HAP2 919 aa29.06■■■□□ 2.24
CCNF-205ENST00000569093 DOCK5Q9H7D0 1870 aa29.06■■■□□ 2.24
CCNF-205ENST00000569093 EPB41L2O43491 1005 aaKnown RBP29.05■■■□□ 2.24
CCNF-205ENST00000569093 NAPAP54920 295 aa29.05■■■□□ 2.24
CCNF-205ENST00000569093 PTPN11Q06124 597 aaPredicted RBP29.05■■■□□ 2.24
CCNF-205ENST00000569093 FBXL16Q8N461 479 aa29.05■■■□□ 2.24
CCNF-205ENST00000569093 AGXT2Q9BYV1 514 aa29.05■■■□□ 2.24
CCNF-205ENST00000569093 PCDHA6Q9UN73 950 aa29.05■■■□□ 2.24
CCNF-205ENST00000569093 PCDHA8Q9Y5H6 950 aa29.05■■■□□ 2.24
CCNF-205ENST00000569093 PSEN2P49810 448 aa29.04■■■□□ 2.24
CCNF-205ENST00000569093 ZNF365Q70YC5 407 aa29.04■■■□□ 2.24
CCNF-205ENST00000569093 SCLYQ96I15 445 aa29.04■■■□□ 2.24
CCNF-205ENST00000569093 ALG1Q9BT22 464 aa29.04■■■□□ 2.24
CCNF-205ENST00000569093 IL23AQ9NPF7 189 aa29.04■■■□□ 2.24
CCNF-205ENST00000569093 STXBP3O00186 592 aa29.03■■■□□ 2.24
CCNF-205ENST00000569093 FIBPO43427 364 aa29.03■■■□□ 2.24
CCNF-205ENST00000569093 PPFIA4O75335 1185 aa29.03■■■□□ 2.24
CCNF-205ENST00000569093 HOXD8P13378 290 aaPredicted RBP29.03■■■□□ 2.24
CCNF-205ENST00000569093 GDF6Q6KF10 455 aaPredicted RBP29.03■■■□□ 2.24
CCNF-205ENST00000569093 XRRA1Q6P2D8 792 aa29.03■■■□□ 2.24
CCNF-205ENST00000569093 RUFY3Q7L099 469 aa29.03■■■□□ 2.24
CCNF-205ENST00000569093 ZSWIM6Q9HCJ5 1215 aa29.03■■■□□ 2.24
CCNF-205ENST00000569093 SPDYE3A6NKU9 549 aa29.02■■■□□ 2.24
CCNF-205ENST00000569093 MFSD10Q14728 455 aa29.02■■■□□ 2.24
CCNF-205ENST00000569093 CYFIP1Q7L576 1253 aa29.02■■■□□ 2.24
CCNF-205ENST00000569093 HDAC6Q9UBN7 1215 aa29.02■■■□□ 2.24
CCNF-205ENST00000569093 TELO2Q9Y4R8 837 aa29.02■■■□□ 2.24
CCNF-205ENST00000569093 CCDC196A0A1B0GTZ2 297 aa29.01■■■□□ 2.23
CCNF-205ENST00000569093 HAS3O00219 553 aa29.01■■■□□ 2.23
CCNF-205ENST00000569093 F2P00734 622 aa29.01■■■□□ 2.23
CCNF-205ENST00000569093 PTGISQ16647 500 aa29.01■■■□□ 2.23
CCNF-205ENST00000569093 KIAA0753Q2KHM9 967 aa29.01■■■□□ 2.23
CCNF-205ENST00000569093 SESTD1Q86VW0 696 aa29.01■■■□□ 2.23
CCNF-205ENST00000569093 PGBD1Q96JS3 809 aa29.01■■■□□ 2.23
CCNF-205ENST00000569093 RIC8AQ9NPQ8 531 aa29.01■■■□□ 2.23
CCNF-205ENST00000569093 BARHL2Q9NY43 387 aa29.01■■■□□ 2.23
CCNF-205ENST00000569093 NOD1Q9Y239 953 aa29.01■■■□□ 2.23
CCNF-205ENST00000569093 SMCO2A6NFE2 343 aa29■■■□□ 2.23
CCNF-205ENST00000569093 PPFIA3O75145 1194 aa29■■■□□ 2.23
CCNF-205ENST00000569093 SMAD3P84022 425 aaKnown RBP29■■■□□ 2.23
CCNF-205ENST00000569093 TOB2Q14106 344 aaPredicted RBP29■■■□□ 2.23
CCNF-205ENST00000569093 NEDD9Q14511 834 aa29■■■□□ 2.23
CCNF-205ENST00000569093 PPP1R18Q6NYC8 613 aa29■■■□□ 2.23
CCNF-205ENST00000569093 NLRX1Q86UT6 975 aa29■■■□□ 2.23
CCNF-205ENST00000569093 C7orf31Q8N865 590 aa29■■■□□ 2.23
CCNF-205ENST00000569093 VWCEQ96DN2 955 aa29■■■□□ 2.23
CCNF-205ENST00000569093 CTAGE1Q96RT6 745 aa29■■■□□ 2.23
CCNF-205ENST00000569093 C16orf70Q9BSU1 422 aa29■■■□□ 2.23
CCNF-205ENST00000569093 MTMR10Q9NXD2 777 aa29■■■□□ 2.23
CCNF-205ENST00000569093 ITGB5P18084 799 aa28.99■■■□□ 2.23
CCNF-205ENST00000569093 PDIA3P30101 505 aaKnown RBP28.99■■■□□ 2.23
CCNF-205ENST00000569093 ADCY7P51828 1080 aa28.99■■■□□ 2.23
CCNF-205ENST00000569093 FAM109BQ6ICB4 259 aaPredicted RBP28.99■■■□□ 2.23
CCNF-205ENST00000569093 PSRC1Q6PGN9 363 aaPredicted RBP28.99■■■□□ 2.23
CCNF-205ENST00000569093 FAM161BQ96MY7 647 aa28.99■■■□□ 2.23
CCNF-205ENST00000569093 LARP6Q9BRS8 491 aaKnown RBP28.99■■■□□ 2.23
CCNF-205ENST00000569093 KATNAL1Q9BW62 490 aa28.99■■■□□ 2.23
CCNF-205ENST00000569093 UPF3BQ9BZI7 483 aaKnown RBP28.99■■■□□ 2.23
CCNF-205ENST00000569093 TMEM260Q9NX78 707 aa28.99■■■□□ 2.23
CCNF-205ENST00000569093 CYP46A1Q9Y6A2 500 aa28.99■■■□□ 2.23
CCNF-205ENST00000569093 SCN5AQ14524 2016 aa28.99■■■□□ 2.23
CCNF-205ENST00000569093 NID2Q14112 1375 aa28.99■■■□□ 2.23
CCNF-205ENST00000569093 TRIP12Q14669 1992 aaPredicted RBP28.99■■■□□ 2.23
CCNF-205ENST00000569093 ATP9AO75110 1047 aa28.98■■■□□ 2.23
CCNF-205ENST00000569093 FGBP02675 491 aa28.98■■■□□ 2.23
CCNF-205ENST00000569093 EVCP57679 992 aa28.98■■■□□ 2.23
CCNF-205ENST00000569093 CCT2P78371 535 aaKnown RBP28.98■■■□□ 2.23
CCNF-205ENST00000569093 PFKFB3Q16875 520 aaPredicted RBP28.98■■■□□ 2.23
CCNF-205ENST00000569093 RASIP1Q5U651 963 aa28.98■■■□□ 2.23
CCNF-205ENST00000569093 METTL7BQ6UX53 244 aa28.98■■■□□ 2.23
CCNF-205ENST00000569093 PHKBQ93100 1093 aa28.98■■■□□ 2.23
CCNF-205ENST00000569093 NCOA5Q9HCD5 579 aaKnown RBP28.98■■■□□ 2.23
CCNF-205ENST00000569093 GTF2IRD1Q9UHL9 959 aa28.98■■■□□ 2.23
CCNF-205ENST00000569093 UBIAD1Q9Y5Z9 338 aa28.98■■■□□ 2.23
CCNF-205ENST00000569093 hCG_1984214I3L0E3 225 aa28.97■■■□□ 2.23
CCNF-205ENST00000569093 NOP56O00567 594 aaKnown RBP28.97■■■□□ 2.23
CCNF-205ENST00000569093 SCG2P13521 617 aa28.97■■■□□ 2.23
CCNF-205ENST00000569093 SP4Q02446 784 aa28.97■■■□□ 2.23
CCNF-205ENST00000569093 HIC1Q14526 733 aa28.97■■■□□ 2.23
CCNF-205ENST00000569093 NTRK3Q16288 839 aa28.97■■■□□ 2.23
CCNF-205ENST00000569093 PKN1Q16512 942 aa28.97■■■□□ 2.23
CCNF-205ENST00000569093 OTOP2Q7RTS6 562 aa28.97■■■□□ 2.23
CCNF-205ENST00000569093 ZNF713Q8N859 430 aaPredicted RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms