RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 SPATA33Q96N06 139 aa20.14■□□□□ 0.81
EDC3-215ENST00000569007 NOC4LQ9BVI4 516 aaKnown RBP20.14■□□□□ 0.81
EDC3-215ENST00000569007 NID2Q14112 1375 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 UMODL1Q5DID0 1318 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 SPDYE3A6NKU9 549 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 SPATA31C2B4DYI2 1134 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 SUPT20HL2P0C7V6 817 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 CYP2C9P11712 490 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 CSF2RAP15509 400 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 ICAM3P32942 547 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 SEMA3FQ13275 785 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 HSDL1Q3SXM5 330 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 PPP1R18Q6NYC8 613 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 TMEM199Q8N511 208 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 TM6SF1Q9BZW5 370 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 BCAS3Q9H6U6 928 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 CYP46A1Q9Y6A2 500 aa20.13■□□□□ 0.81
EDC3-215ENST00000569007 STXBP3O00186 592 aa20.12■□□□□ 0.81
EDC3-215ENST00000569007 FIBPO43427 364 aa20.12■□□□□ 0.81
EDC3-215ENST00000569007 ZNF286BP0CG31 522 aa20.12■□□□□ 0.81
EDC3-215ENST00000569007 HOXD8P13378 290 aaPredicted RBP20.12■□□□□ 0.81
EDC3-215ENST00000569007 PTPN11Q06124 597 aaPredicted RBP20.12■□□□□ 0.81
EDC3-215ENST00000569007 PPIGQ13427 754 aaKnown RBP eCLIP20.12■□□□□ 0.81
EDC3-215ENST00000569007 UPF3BQ9BZI7 483 aaKnown RBP20.12■□□□□ 0.81
EDC3-215ENST00000569007 MLXIPQ9HAP2 919 aa20.12■□□□□ 0.81
EDC3-215ENST00000569007 RIC8AQ9NPQ8 531 aa20.12■□□□□ 0.81
EDC3-215ENST00000569007 BARHL2Q9NY43 387 aa20.12■□□□□ 0.81
EDC3-215ENST00000569007 PCDHA6Q9UN73 950 aa20.12■□□□□ 0.81
EDC3-215ENST00000569007 PCDHA8Q9Y5H6 950 aa20.12■□□□□ 0.81
EDC3-215ENST00000569007 MYH7BA7E2Y1 1941 aa20.12■□□□□ 0.81
EDC3-215ENST00000569007 hCG_1984214I3L0E3 225 aa20.11■□□□□ 0.81
EDC3-215ENST00000569007 PPFIA4O75335 1185 aa20.11■□□□□ 0.81
EDC3-215ENST00000569007 PDIA3P30101 505 aaKnown RBP20.11■□□□□ 0.81
EDC3-215ENST00000569007 ADCY7P51828 1080 aa20.11■□□□□ 0.81
EDC3-215ENST00000569007 CCL23P55773 120 aa20.11■□□□□ 0.81
EDC3-215ENST00000569007 EVCP57679 992 aa20.11■□□□□ 0.81
EDC3-215ENST00000569007 TOB2Q14106 344 aaPredicted RBP20.11■□□□□ 0.81
EDC3-215ENST00000569007 PFKFB3Q16875 520 aaPredicted RBP20.11■□□□□ 0.81
EDC3-215ENST00000569007 GPR153Q6NV75 609 aa20.11■□□□□ 0.81
EDC3-215ENST00000569007 C16orf59Q7L2K0 433 aa20.11■□□□□ 0.81
EDC3-215ENST00000569007 ZNF713Q8N859 430 aaPredicted RBP20.11■□□□□ 0.81
EDC3-215ENST00000569007 RNPC3Q96LT9 517 aaKnown RBP20.11■□□□□ 0.81
EDC3-215ENST00000569007 SMCO2A6NFE2 343 aa20.1■□□□□ 0.81
EDC3-215ENST00000569007 F2P00734 622 aa20.1■□□□□ 0.81
EDC3-215ENST00000569007 SCG2P13521 617 aa20.1■□□□□ 0.81
EDC3-215ENST00000569007 PSEN2P49810 448 aa20.1■□□□□ 0.81
EDC3-215ENST00000569007 NEDD9Q14511 834 aa20.1■□□□□ 0.81
EDC3-215ENST00000569007 NLRX1Q86UT6 975 aa20.1■□□□□ 0.81
EDC3-215ENST00000569007 PHKBQ93100 1093 aa20.1■□□□□ 0.81
EDC3-215ENST00000569007 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.1■□□□□ 0.811e-6■■■□□ 17.6
EDC3-215ENST00000569007 WNT8AQ9H1J5 351 aa20.1■□□□□ 0.81
EDC3-215ENST00000569007 ACRP10323 421 aa20.09■□□□□ 0.81
EDC3-215ENST00000569007 ITGB5P18084 799 aa20.09■□□□□ 0.81
EDC3-215ENST00000569007 CCT2P78371 535 aaKnown RBP20.09■□□□□ 0.81
EDC3-215ENST00000569007 MFSD10Q14728 455 aa20.09■□□□□ 0.81
EDC3-215ENST00000569007 TMEM240Q5SV17 173 aa20.09■□□□□ 0.81
EDC3-215ENST00000569007 METTL7BQ6UX53 244 aa20.09■□□□□ 0.81
EDC3-215ENST00000569007 CYFIP1Q7L576 1253 aa20.09■□□□□ 0.81
EDC3-215ENST00000569007 TEX2Q8IWB9 1127 aa20.09■□□□□ 0.81
EDC3-215ENST00000569007 ALG1Q9BT22 464 aa20.09■□□□□ 0.81
EDC3-215ENST00000569007 KATNAL1Q9BW62 490 aa20.09■□□□□ 0.81
EDC3-215ENST00000569007 EHMT1Q9H9B1 1298 aa20.09■□□□□ 0.81
EDC3-215ENST00000569007 NCOA5Q9HCD5 579 aaKnown RBP20.09■□□□□ 0.81
EDC3-215ENST00000569007 IL23AQ9NPF7 189 aa20.09■□□□□ 0.81
EDC3-215ENST00000569007 NOD1Q9Y239 953 aa20.09■□□□□ 0.81
EDC3-215ENST00000569007 HAS3O00219 553 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 NOP56O00567 594 aaKnown RBP20.08■□□□□ 0.81
EDC3-215ENST00000569007 PRPF3O43395 683 aaKnown RBP20.08■□□□□ 0.81
EDC3-215ENST00000569007 PPFIA3O75145 1194 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 NTRK3Q16288 839 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 PKN1Q16512 942 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 PTGISQ16647 500 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 KIAA0753Q2KHM9 967 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 GDF6Q6KF10 455 aaPredicted RBP20.08■□□□□ 0.81
EDC3-215ENST00000569007 Q7L0L9 218 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 SESTD1Q86VW0 696 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 C7orf31Q8N865 590 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 GPRASP2Q96D09 838 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 PGBD1Q96JS3 809 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 SENP7Q9BQF6 1050 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 LARP6Q9BRS8 491 aaKnown RBP20.08■□□□□ 0.81
EDC3-215ENST00000569007 PDRG1Q9NUG6 133 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 HDAC6Q9UBN7 1215 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 UBIAD1Q9Y5Z9 338 aa20.08■□□□□ 0.81
EDC3-215ENST00000569007 FOSP01100 380 aaPredicted RBP20.07■□□□□ 0.8
EDC3-215ENST00000569007 IFNAR1P17181 557 aa20.07■□□□□ 0.8
EDC3-215ENST00000569007 AKAP17AQ02040 695 aaKnown RBP20.07■□□□□ 0.8
EDC3-215ENST00000569007 PSRC1Q6PGN9 363 aaPredicted RBP20.07■□□□□ 0.8
EDC3-215ENST00000569007 ZNF365Q70YC5 407 aa20.07■□□□□ 0.8
EDC3-215ENST00000569007 DEFB123Q8N688 67 aa20.07■□□□□ 0.8
EDC3-215ENST00000569007 SCLYQ96I15 445 aa20.07■□□□□ 0.8
EDC3-215ENST00000569007 CDHR1Q96JP9 859 aa20.07■□□□□ 0.8
EDC3-215ENST00000569007 CTAGE1Q96RT6 745 aa20.07■□□□□ 0.8
EDC3-215ENST00000569007 C16orf70Q9BSU1 422 aa20.07■□□□□ 0.8
EDC3-215ENST00000569007 GLT8D2Q9H1C3 349 aa20.07■□□□□ 0.8
EDC3-215ENST00000569007 TMEM260Q9NX78 707 aa20.07■□□□□ 0.8
EDC3-215ENST00000569007 GTF2IRD1Q9UHL9 959 aa20.07■□□□□ 0.8
EDC3-215ENST00000569007 TELO2Q9Y4R8 837 aa20.07■□□□□ 0.8
EDC3-215ENST00000569007 ATP9AO75110 1047 aa20.06■□□□□ 0.8
EDC3-215ENST00000569007 SP4Q02446 784 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms