RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 RNPC3Q96LT9 517 aaKnown RBP20.87■□□□□ 0.93
SIN3A-212ENST00000568919 SPATA33Q96N06 139 aa20.87■□□□□ 0.93
SIN3A-212ENST00000568919 INPP4AQ96PE3 977 aaPredicted RBP20.87■□□□□ 0.93
SIN3A-212ENST00000568919 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.87■□□□□ 0.93
SIN3A-212ENST00000568919 BCAS3Q9H6U6 928 aa20.87■□□□□ 0.93
SIN3A-212ENST00000568919 SPATA31C2B4DYI2 1134 aa20.86■□□□□ 0.93
SIN3A-212ENST00000568919 PPFIA4O75335 1185 aa20.86■□□□□ 0.93
SIN3A-212ENST00000568919 ACRP10323 421 aa20.86■□□□□ 0.93
SIN3A-212ENST00000568919 UBA1P22314 1058 aaKnown RBP20.86■□□□□ 0.93
SIN3A-212ENST00000568919 ADD1P35611 737 aaKnown RBP20.86■□□□□ 0.93
SIN3A-212ENST00000568919 CCL23P55773 120 aa20.86■□□□□ 0.93
SIN3A-212ENST00000568919 UBE2SQ16763 222 aa20.86■□□□□ 0.93
SIN3A-212ENST00000568919 HSDL1Q3SXM5 330 aa20.86■□□□□ 0.93
SIN3A-212ENST00000568919 GNPTABQ3T906 1256 aa20.86■□□□□ 0.93
SIN3A-212ENST00000568919 WWC2Q6AWC2 1192 aa20.86■□□□□ 0.93
SIN3A-212ENST00000568919 XRRA1Q6P2D8 792 aa20.86■□□□□ 0.93
SIN3A-212ENST00000568919 AGXT2Q9BYV1 514 aa20.86■□□□□ 0.93
SIN3A-212ENST00000568919 MLXIPQ9HAP2 919 aa20.86■□□□□ 0.93
SIN3A-212ENST00000568919 HOXD8P13378 290 aaPredicted RBP20.85■□□□□ 0.93
SIN3A-212ENST00000568919 SEMA3FQ13275 785 aa20.85■□□□□ 0.93
SIN3A-212ENST00000568919 ZNF365Q70YC5 407 aa20.85■□□□□ 0.93
SIN3A-212ENST00000568919 WNT8AQ9H1J5 351 aa20.85■□□□□ 0.93
SIN3A-212ENST00000568919 IL23AQ9NPF7 189 aa20.85■□□□□ 0.93
SIN3A-212ENST00000568919 FIBPO43427 364 aa20.84■□□□□ 0.93
SIN3A-212ENST00000568919 PSEN2P49810 448 aa20.84■□□□□ 0.93
SIN3A-212ENST00000568919 METAP2P50579 478 aaKnown RBP eCLIP20.84■□□□□ 0.93
SIN3A-212ENST00000568919 FAM109BQ6ICB4 259 aaPredicted RBP20.84■□□□□ 0.93
SIN3A-212ENST00000568919 TYW1BQ6NUM6 668 aa20.84■□□□□ 0.93
SIN3A-212ENST00000568919 SESTD1Q86VW0 696 aa20.84■□□□□ 0.93
SIN3A-212ENST00000568919 PCDHA6Q9UN73 950 aa20.84■□□□□ 0.93
SIN3A-212ENST00000568919 PCDHA8Q9Y5H6 950 aa20.84■□□□□ 0.93
SIN3A-212ENST00000568919 CCDC196A0A1B0GTZ2 297 aa20.83■□□□□ 0.93
SIN3A-212ENST00000568919 HAS3O00219 553 aa20.83■□□□□ 0.93
SIN3A-212ENST00000568919 NAPAP54920 295 aa20.83■□□□□ 0.93
SIN3A-212ENST00000568919 SMAD3P84022 425 aaKnown RBP20.83■□□□□ 0.93
SIN3A-212ENST00000568919 NEDD9Q14511 834 aa20.83■□□□□ 0.93
SIN3A-212ENST00000568919 PTGISQ16647 500 aa20.83■□□□□ 0.93
SIN3A-212ENST00000568919 GDF6Q6KF10 455 aaPredicted RBP20.83■□□□□ 0.93
SIN3A-212ENST00000568919 RUFY3Q7L099 469 aa20.83■□□□□ 0.93
SIN3A-212ENST00000568919 NLRX1Q86UT6 975 aa20.83■□□□□ 0.93
SIN3A-212ENST00000568919 ALG1Q9BT22 464 aa20.83■□□□□ 0.93
SIN3A-212ENST00000568919 ZSWIM6Q9HCJ5 1215 aa20.83■□□□□ 0.93
SIN3A-212ENST00000568919 MTMR10Q9NXD2 777 aa20.83■□□□□ 0.93
SIN3A-212ENST00000568919 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.82■□□□□ 0.92
SIN3A-212ENST00000568919 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.82■□□□□ 0.92
SIN3A-212ENST00000568919 SPDYE3A6NKU9 549 aa20.82■□□□□ 0.92
SIN3A-212ENST00000568919 STXBP3O00186 592 aa20.82■□□□□ 0.92
SIN3A-212ENST00000568919 FGBP02675 491 aa20.82■□□□□ 0.92
SIN3A-212ENST00000568919 ZNF286BP0CG31 522 aa20.82■□□□□ 0.92
SIN3A-212ENST00000568919 MFSD10Q14728 455 aa20.82■□□□□ 0.92
SIN3A-212ENST00000568919 CYFIP1Q7L576 1253 aa20.82■□□□□ 0.92
SIN3A-212ENST00000568919 SCLYQ96I15 445 aa20.82■□□□□ 0.92
SIN3A-212ENST00000568919 CTAGE1Q96RT6 745 aa20.82■□□□□ 0.92
SIN3A-212ENST00000568919 KATNAL1Q9BW62 490 aa20.82■□□□□ 0.92
SIN3A-212ENST00000568919 RIC8AQ9NPQ8 531 aa20.82■□□□□ 0.92
SIN3A-212ENST00000568919 BARHL2Q9NY43 387 aa20.82■□□□□ 0.92
SIN3A-212ENST00000568919 HDAC6Q9UBN7 1215 aa20.82■□□□□ 0.92
SIN3A-212ENST00000568919 hCG_1984214I3L0E3 225 aa20.81■□□□□ 0.92
SIN3A-212ENST00000568919 F2P00734 622 aa20.81■□□□□ 0.92
SIN3A-212ENST00000568919 EVCP57679 992 aa20.81■□□□□ 0.92
SIN3A-212ENST00000568919 KIAA0753Q2KHM9 967 aa20.81■□□□□ 0.92
SIN3A-212ENST00000568919 RASIP1Q5U651 963 aa20.81■□□□□ 0.92
SIN3A-212ENST00000568919 PSRC1Q6PGN9 363 aaPredicted RBP20.81■□□□□ 0.92
SIN3A-212ENST00000568919 METTL7BQ6UX53 244 aa20.81■□□□□ 0.92
SIN3A-212ENST00000568919 RPUSD2Q8IZ73 545 aaKnown RBP20.81■□□□□ 0.92
SIN3A-212ENST00000568919 ZNF713Q8N859 430 aaPredicted RBP20.81■□□□□ 0.92
SIN3A-212ENST00000568919 C7orf31Q8N865 590 aa20.81■□□□□ 0.92
SIN3A-212ENST00000568919 VWCEQ96DN2 955 aa20.81■□□□□ 0.92
SIN3A-212ENST00000568919 SENP7Q9BQF6 1050 aa20.81■□□□□ 0.92
SIN3A-212ENST00000568919 C16orf70Q9BSU1 422 aa20.81■□□□□ 0.92
SIN3A-212ENST00000568919 GTF2IRD1Q9UHL9 959 aa20.81■□□□□ 0.92
SIN3A-212ENST00000568919 NOD1Q9Y239 953 aa20.81■□□□□ 0.92
SIN3A-212ENST00000568919 LAMA2P24043 3122 aaKnown RBP20.81■□□□□ 0.92
SIN3A-212ENST00000568919 SMCO2A6NFE2 343 aa20.8■□□□□ 0.92
SIN3A-212ENST00000568919 ITGB5P18084 799 aa20.8■□□□□ 0.92
SIN3A-212ENST00000568919 PDIA3P30101 505 aaKnown RBP20.8■□□□□ 0.92
SIN3A-212ENST00000568919 PFKFB3Q16875 520 aaPredicted RBP20.8■□□□□ 0.92
SIN3A-212ENST00000568919 PPP1R18Q6NYC8 613 aa20.8■□□□□ 0.92
SIN3A-212ENST00000568919 TEX2Q8IWB9 1127 aa20.8■□□□□ 0.92
SIN3A-212ENST00000568919 RETREG2Q8NC44 543 aa20.8■□□□□ 0.92
SIN3A-212ENST00000568919 HERVK_113Q902F9 699 aa20.8■□□□□ 0.92
SIN3A-212ENST00000568919 GPRASP2Q96D09 838 aa20.8■□□□□ 0.92
SIN3A-212ENST00000568919 TM6SF1Q9BZW5 370 aa20.8■□□□□ 0.92
SIN3A-212ENST00000568919 UBIAD1Q9Y5Z9 338 aa20.8■□□□□ 0.92
SIN3A-212ENST00000568919 CYP46A1Q9Y6A2 500 aa20.8■□□□□ 0.92
SIN3A-212ENST00000568919 TRIP12Q14669 1992 aaPredicted RBP20.79■□□□□ 0.92
SIN3A-212ENST00000568919 PRPF3O43395 683 aaKnown RBP20.79■□□□□ 0.92
SIN3A-212ENST00000568919 ATP9AO75110 1047 aa20.79■□□□□ 0.92
SIN3A-212ENST00000568919 ADCY7P51828 1080 aa20.79■□□□□ 0.92
SIN3A-212ENST00000568919 BFSP2Q13515 415 aa20.79■□□□□ 0.92
SIN3A-212ENST00000568919 TOB2Q14106 344 aaPredicted RBP20.79■□□□□ 0.92
SIN3A-212ENST00000568919 GPR20Q99678 358 aa20.79■□□□□ 0.92
SIN3A-212ENST00000568919 JADE2Q9NQC1 790 aa20.79■□□□□ 0.92
SIN3A-212ENST00000568919 TELO2Q9Y4R8 837 aa20.79■□□□□ 0.92
SIN3A-212ENST00000568919 DOCK5Q9H7D0 1870 aa20.79■□□□□ 0.92
SIN3A-212ENST00000568919 NID2Q14112 1375 aa20.78■□□□□ 0.92
SIN3A-212ENST00000568919 PITPNM1O00562 1244 aa20.78■□□□□ 0.92
SIN3A-212ENST00000568919 NOP56O00567 594 aaKnown RBP20.78■□□□□ 0.92
SIN3A-212ENST00000568919 FOSP01100 380 aaPredicted RBP20.78■□□□□ 0.92
SIN3A-212ENST00000568919 IQCF3P0C7M6 154 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms