RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 BRAPQ7Z569 592 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 PLA2G4DQ86XP0 818 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 FBXO16Q8IX29 292 aaPredicted RBP13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 TAAR1Q96RJ0 339 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 TTC12Q9H892 705 aaPredicted RBP13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 COL20A1Q9P218 1284 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 LAMA2P24043 3122 aaKnown RBP13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 UQCRHLA0A096LP55 91 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 RBM47A0AV96 593 aaKnown RBP13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 UQCRHP07919 91 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 KIF5BP33176 963 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 GTF2F1P35269 517 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 ACLYP53396 1101 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 FAM160A1Q05DH4 1040 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 TPRNQ4KMQ1 711 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 HABP4Q5JVS0 413 aaKnown RBP13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 HOMER1Q86YM7 354 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 CKAP2LQ8IYA6 745 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 ENGASEQ8NFI3 743 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 MYRIPQ8NFW9 859 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 CTCFLQ8NI51 663 aaPredicted RBP13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 SPZ1Q9BXG8 430 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 SPC25Q9HBM1 224 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 MAP3K20Q9NYL2 800 aaKnown RBP13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 ZMYND8Q9ULU4 1186 aaPredicted RBP13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 SLC12A7Q9Y666 1083 aa13.17□□□□□ -0.3
SNAPC5-208ENST00000568875 A0A1W2PQ45 241 aaPredicted RBP13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 A0A1W2PQY0 241 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 MOXD2PA6NHM9 499 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 YEATS4O95619 227 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 C6orf222P0C671 652 aaPredicted RBP13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 CALM1P0DP23 149 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 CALM2P0DP24 149 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 CALM3P0DP25 149 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 FDPSP14324 419 aaKnown RBP13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 GNAQP50148 359 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 HSD17B4P51659 736 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 RTP1P59025 263 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 CCT2P78371 535 aaKnown RBP13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 TRAF1Q13077 416 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 STX1AQ16623 288 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 GNASQ5JWF2 1037 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 ADALQ6DHV7 355 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 SRBD1Q8N5C6 995 aaKnown RBP13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 SAMD3Q8N6K7 520 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 GDF15Q99988 308 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 LZTS2Q9BRK4 669 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 Q9Y3F1 56 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 B4DLN1 442 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 DYNC1LI2O43237 492 aaPredicted RBP13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 KINO60870 393 aaKnown RBP13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 CFBP00751 764 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 ASGR1P07306 291 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 SYN1P17600 705 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 RXRAP19793 462 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 PTGS1P23219 599 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 ZNF75DP51815 510 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 MRPL12P52815 198 aaKnown RBP13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 PLCB2Q00722 1185 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 PDE4DQ08499 809 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 DUSP28Q4G0W2 176 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 GLIPR1L2Q4G1C9 344 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 FANCBQ8NB91 859 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 PCSK9Q8NBP7 692 aaKnown RBP13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 FBXO18Q8NFZ0 1043 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 KCNG4Q8TDN1 519 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 NSUN6Q8TEA1 469 aaKnown RBP13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 IWS1Q96ST2 819 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 RMDN3Q96TC7 470 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 MPHOSPH6Q99547 160 aaKnown RBP13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 WDR11Q9BZH6 1224 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 POLR3EQ9NVU0 708 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 ANO10Q9NW15 660 aa13.16□□□□□ -0.3
SNAPC5-208ENST00000568875 PLEKHA8P1O95397 391 aa13.15□□□□□ -0.3
SNAPC5-208ENST00000568875 IQCB1Q15051 598 aa13.15□□□□□ -0.3
SNAPC5-208ENST00000568875 DNTTIP2Q5QJE6 756 aaKnown RBP13.15□□□□□ -0.3
SNAPC5-208ENST00000568875 ZNF830Q96NB3 372 aaPredicted RBP13.15□□□□□ -0.3
SNAPC5-208ENST00000568875 ATP11BQ9Y2G3 1177 aa13.15□□□□□ -0.3
SNAPC5-208ENST00000568875 NEMFO60524 1076 aa13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 BMP8BP34820 402 aa13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 BEX3Q00994 111 aa13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 TRIM60Q495X7 471 aa13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 APOA5Q6Q788 366 aa13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 TLK2Q86UE8 772 aa13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 RAB11FIP4Q86YS3 637 aa13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 CMTR1Q8N1G2 835 aaKnown RBP13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 RRP36Q96EU6 259 aaKnown RBP13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 MRFAP1L1Q96HT8 127 aa13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 C8orf76Q96K31 380 aa13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 AP5M1Q9H0R1 490 aa13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 KCNF1Q9H3M0 494 aa13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 NCOA5Q9HCD5 579 aaKnown RBP13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 LRRC37A2A6NM11 1700 aa13.14□□□□□ -0.31
SNAPC5-208ENST00000568875 MYH15Q9Y2K3 1946 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 KLF18A0A0U1RQI7 1052 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 GOLGA6L19H0YKK7 550 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms