RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 SHISA2Q6UWI4 295 aa7.07□□□□□ -1.28
CDH13-211ENST00000568770 FOXD4L3Q6VB84 417 aaPredicted RBP7.07□□□□□ -1.28
CDH13-211ENST00000568770 VPS37DQ86XT2 251 aa7.07□□□□□ -1.28
CDH13-211ENST00000568770 C7orf61Q8IZ16 206 aa7.07□□□□□ -1.28
CDH13-211ENST00000568770 STK35Q8TDR2 534 aa7.07□□□□□ -1.28
CDH13-211ENST00000568770 DIS3LQ8TF46 1054 aaKnown RBP7.07□□□□□ -1.28
CDH13-211ENST00000568770 PARK7Q99497 189 aaKnown RBP7.07□□□□□ -1.28
CDH13-211ENST00000568770 GDF15Q99988 308 aa7.07□□□□□ -1.28
CDH13-211ENST00000568770 PUS3Q9BZE2 481 aaKnown RBP7.07□□□□□ -1.28
CDH13-211ENST00000568770 PAK6Q9NQU5 681 aaPredicted RBP7.07□□□□□ -1.28
CDH13-211ENST00000568770 RPAP1Q9BWH6 1393 aaPredicted RBP7.07□□□□□ -1.28
CDH13-211ENST00000568770 ENC1O14682 589 aa7.06□□□□□ -1.28
CDH13-211ENST00000568770 TNPO2O14787 897 aaKnown RBP7.06□□□□□ -1.28
CDH13-211ENST00000568770 FRAT2O75474 233 aaPredicted RBP7.06□□□□□ -1.28
CDH13-211ENST00000568770 ECEL1O95672 775 aa7.06□□□□□ -1.28
CDH13-211ENST00000568770 RECKO95980 971 aa7.06□□□□□ -1.28
CDH13-211ENST00000568770 SYN1P17600 705 aa7.06□□□□□ -1.28
CDH13-211ENST00000568770 LRIT3Q3SXY7 679 aa7.06□□□□□ -1.28
CDH13-211ENST00000568770 RPS26P11Q5JNZ5 115 aaPredicted RBP7.06□□□□□ -1.28
CDH13-211ENST00000568770 NECAB2Q7Z6G3 386 aa7.06□□□□□ -1.28
CDH13-211ENST00000568770 TBC1D22AQ8WUA7 517 aa7.06□□□□□ -1.28
CDH13-211ENST00000568770 NECAB3Q96P71 396 aaPredicted RBP7.06□□□□□ -1.28
CDH13-211ENST00000568770 TRIM56Q9BRZ2 755 aaKnown RBP7.06□□□□□ -1.28
CDH13-211ENST00000568770 MRIQ9BWK5 157 aa7.06□□□□□ -1.28
CDH13-211ENST00000568770 MTMR10Q9NXD2 777 aa7.06□□□□□ -1.28
CDH13-211ENST00000568770 ZNF112Q9UJU3 913 aa7.06□□□□□ -1.28
CDH13-211ENST00000568770 ZMYND8Q9ULU4 1186 aaPredicted RBP7.06□□□□□ -1.28
CDH13-211ENST00000568770 LOC285556D6RIA3 1793 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 FAM181BA6NEQ2 426 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 F6X3S4 739 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 GRM8O00222 908 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 WISP1O95388 367 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 CTSBP07858 339 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 CELA3AP09093 270 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 SELPP16109 830 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 CAPN2P17655 700 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 GSTM4Q03013 218 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 C19orf57Q0VDD7 668 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 TCP10Q12799 353 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 DDX10Q13206 875 aaKnown RBP7.05□□□□□ -1.28
CDH13-211ENST00000568770 TSNAXIP1Q2TAA8 658 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 CAVIN4Q5BKX8 364 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 NOL9Q5SY16 702 aaKnown RBP7.05□□□□□ -1.28
CDH13-211ENST00000568770 BEND3Q5T5X7 828 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 RASIP1Q5U651 963 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 HHIPL2Q6UWX4 724 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 TDHQ8IZJ6 230 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 DTWD1Q8N5C7 304 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 FAM151AQ8WW52 585 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 CRELD1Q96HD1 420 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 NRSN2Q9GZP1 204 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 OSGEPQ9NPF4 335 aa7.05□□□□□ -1.28
CDH13-211ENST00000568770 MAST3O60307 1309 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 MROH5Q6ZUA9 1318 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 A0A0G2JLL6 359 aaPredicted RBP7.04□□□□□ -1.28
CDH13-211ENST00000568770 KRBA1A5PL33 1030 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 CXCL11O14625 94 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 DLGAP3O95886 979 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 VAMP1P23763 118 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 CD68P34810 354 aaPredicted RBP7.04□□□□□ -1.28
CDH13-211ENST00000568770 MAGEA10P43363 369 aaPredicted RBP7.04□□□□□ -1.28
CDH13-211ENST00000568770 NLRP12P59046 1061 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 RAC1P63000 192 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 FAM117BQ6P1L5 589 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 GADL1Q6ZQY3 521 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 FASTKD5Q7L8L6 764 aaKnown RBP7.04□□□□□ -1.28
CDH13-211ENST00000568770 PRRT2Q7Z6L0 340 aaPredicted RBP7.04□□□□□ -1.28
CDH13-211ENST00000568770 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDH13-211ENST00000568770 TMEM87AQ8NBN3 555 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 WNT8BQ93098 351 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDH13-211ENST00000568770 SOX17Q9H6I2 414 aaPredicted RBP7.04□□□□□ -1.28
CDH13-211ENST00000568770 TMEM39AQ9NV64 488 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 NOP53Q9NZM5 478 aaKnown RBP7.04□□□□□ -1.28
CDH13-211ENST00000568770 GPN3Q9UHW5 284 aaPredicted RBP7.04□□□□□ -1.28
CDH13-211ENST00000568770 ZHX2Q9Y6X8 837 aa7.04□□□□□ -1.28
CDH13-211ENST00000568770 MAST2Q6P0Q8 1798 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 PDE8BO95263 885 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 BMP6P22004 513 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 NFIAQ12857 509 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 SUZ12Q15022 739 aaKnown RBP7.03□□□□□ -1.28
CDH13-211ENST00000568770 LRRC24Q50LG9 513 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 METTL24Q5JXM2 366 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 CDC42EP5Q6NZY7 148 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 ZFPM1Q8IX07 1006 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 ANKRD13CQ8N6S4 541 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 KLHL23Q8NBE8 558 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 SMCR8Q8TEV9 937 aaPredicted RBP7.03□□□□□ -1.28
CDH13-211ENST00000568770 COA7Q96BR5 231 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 KAZALD1Q96I82 304 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 C11orf49Q9H6J7 331 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 ZFYVE1Q9HBF4 777 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 PICK1Q9NRD5 415 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 C9orf78Q9NZ63 289 aaPredicted RBP7.03□□□□□ -1.28
CDH13-211ENST00000568770 PPM1HQ9ULR3 514 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 SLC45A1Q9Y2W3 748 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 SUGT1Q9Y2Z0 365 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 AFG3L2Q9Y4W6 797 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 LTBP2Q14767 1821 aa7.03□□□□□ -1.28
CDH13-211ENST00000568770 SPDYE3A6NKU9 549 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms