RNA–Protein interactions for RNA: ENST00000568632.5

CDH16-207, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-207ENST00000568632 KRI1Q8N9T8 703 aaKnown RBP17.32■□□□□ 0.36
CDH16-207ENST00000568632 TBC1D5Q92609 795 aa17.32■□□□□ 0.36
CDH16-207ENST00000568632 ATG4CQ96DT6 458 aa17.32■□□□□ 0.36
CDH16-207ENST00000568632 C12orf42Q96LP6 360 aa17.32■□□□□ 0.36
CDH16-207ENST00000568632 TNNT3P45378 269 aaPredicted RBP17.32■□□□□ 0.36
CDH16-207ENST00000568632 TREML2Q5T2D2 321 aa17.32■□□□□ 0.36
CDH16-207ENST00000568632 SHC4Q6S5L8 630 aa17.32■□□□□ 0.36
CDH16-207ENST00000568632 TC2NQ8N9U0 490 aa17.32■□□□□ 0.36
CDH16-207ENST00000568632 RAVER2Q9HCJ3 691 aaKnown RBP17.32■□□□□ 0.36
CDH16-207ENST00000568632 CCNT1O60563 726 aaKnown RBP17.31■□□□□ 0.36
CDH16-207ENST00000568632 PNOCQ13519 176 aa17.31■□□□□ 0.36
CDH16-207ENST00000568632 ERO1BQ86YB8 467 aa17.31■□□□□ 0.36
CDH16-207ENST00000568632 CCPG1Q9ULG6 757 aa17.31■□□□□ 0.36
CDH16-207ENST00000568632 RRP15Q9Y3B9 282 aaKnown RBP17.31■□□□□ 0.36
CDH16-207ENST00000568632 NEK8Q86SG6 692 aa17.31■□□□□ 0.36
CDH16-207ENST00000568632 HNRNPLLQ8WVV9 542 aaKnown RBP17.31■□□□□ 0.36
CDH16-207ENST00000568632 OPTNQ96CV9 577 aa17.31■□□□□ 0.36
CDH16-207ENST00000568632 SLC38A10Q9HBR0 1119 aa17.31■□□□□ 0.36
CDH16-207ENST00000568632 HOMER2Q9NSB8 354 aa17.31■□□□□ 0.36
CDH16-207ENST00000568632 SPDYE5A6NIY4 337 aa17.3■□□□□ 0.36
CDH16-207ENST00000568632 EDIL3O43854 480 aa17.3■□□□□ 0.36
CDH16-207ENST00000568632 ICAM1P05362 532 aa17.3■□□□□ 0.36
CDH16-207ENST00000568632 PTPREP23469 700 aa17.3■□□□□ 0.36
CDH16-207ENST00000568632 PPATQ06203 517 aa17.3■□□□□ 0.36
CDH16-207ENST00000568632 RBM46Q8TBY0 533 aaKnown RBP17.3■□□□□ 0.36
CDH16-207ENST00000568632 PTPRFP10586 1907 aa17.3■□□□□ 0.36
CDH16-207ENST00000568632 FAM237AA0A1B0GTK4 181 aa17.3■□□□□ 0.36
CDH16-207ENST00000568632 VWA5AO00534 786 aa17.3■□□□□ 0.36
CDH16-207ENST00000568632 CFBP00751 764 aa17.3■□□□□ 0.36
CDH16-207ENST00000568632 ATP2C1P98194 919 aaPredicted RBP17.3■□□□□ 0.36
CDH16-207ENST00000568632 BEND6Q5SZJ8 279 aaPredicted RBP17.3■□□□□ 0.36
CDH16-207ENST00000568632 TMEM60Q9H2L4 133 aa17.3■□□□□ 0.36
CDH16-207ENST00000568632 CUTAO60888 179 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 SH3D19Q5HYK7 790 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 LDLRAD1Q5T700 205 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 GADL1Q6ZQY3 521 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 CSRNP2Q9H175 543 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 SRPRBQ9Y5M8 271 aaKnown RBP17.29■□□□□ 0.36
CDH16-207ENST00000568632 PARP14Q460N5 1801 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 TDP2O95551 362 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 BMP6P22004 513 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 IL17AQ16552 155 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 CATSPERGQ6ZRH7 1159 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 USP49Q70CQ1 688 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 PDILTQ8N807 584 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 C4orf32Q8N8J7 132 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 PDE11AQ9HCR9 933 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 RLFQ13129 1914 aa17.29■□□□□ 0.36
CDH16-207ENST00000568632 CELF2O95319 508 aaKnown RBP17.28■□□□□ 0.36
CDH16-207ENST00000568632 ALAS1P13196 640 aa17.28■□□□□ 0.36
CDH16-207ENST00000568632 ADKP55263 362 aaKnown RBP17.28■□□□□ 0.36
CDH16-207ENST00000568632 COG2Q14746 738 aa17.28■□□□□ 0.36
CDH16-207ENST00000568632 SRGAP1Q7Z6B7 1085 aa17.28■□□□□ 0.36
CDH16-207ENST00000568632 MSL3Q8N5Y2 521 aaKnown RBP17.28■□□□□ 0.36
CDH16-207ENST00000568632 ANO3Q9BYT9 981 aa17.28■□□□□ 0.36
CDH16-207ENST00000568632 GLT8D2Q9H1C3 349 aa17.28■□□□□ 0.36
CDH16-207ENST00000568632 ANKZF1Q9H8Y5 726 aa17.28■□□□□ 0.36
CDH16-207ENST00000568632 CTDP1Q9Y5B0 961 aaPredicted RBP17.28■□□□□ 0.36
CDH16-207ENST00000568632 NFIBO00712 420 aa17.28■□□□□ 0.36
CDH16-207ENST00000568632 PEX10O60683 326 aa17.28■□□□□ 0.36
CDH16-207ENST00000568632 GJA5P36382 358 aa17.28■□□□□ 0.36
CDH16-207ENST00000568632 RESP18Q5W5W9 173 aa17.28■□□□□ 0.36
CDH16-207ENST00000568632 MRPL44Q9H9J2 332 aaKnown RBP17.28■□□□□ 0.36
CDH16-207ENST00000568632 RAB21Q9UL25 225 aa17.28■□□□□ 0.36
CDH16-207ENST00000568632 A0A0G2JLL6 359 aaPredicted RBP17.27■□□□□ 0.36
CDH16-207ENST00000568632 ZBED4O75132 1171 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 RPS6KA5O75582 802 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 BMP15O95972 392 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 DSG3P32926 999 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 CHMP4BP1P59074 171 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 MKRN3Q13064 507 aaKnown RBP17.27■□□□□ 0.36
CDH16-207ENST00000568632 KARSQ15046 597 aaKnown RBP17.27■□□□□ 0.36
CDH16-207ENST00000568632 SPECC1LQ69YQ0 1117 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 PRRT2Q7Z6L0 340 aaPredicted RBP17.27■□□□□ 0.36
CDH16-207ENST00000568632 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 DESI2Q9BSY9 194 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 IRX2Q9BZI1 471 aaPredicted RBP17.27■□□□□ 0.36
CDH16-207ENST00000568632 VPS18Q9P253 973 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 MRPL11Q9Y3B7 192 aaKnown RBP17.27■□□□□ 0.36
CDH16-207ENST00000568632 PCDHA5Q9Y5H7 936 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 SPDYE3A6NKU9 549 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 SLC37A4O43826 429 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 PPIL2Q13356 520 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 SLC10A4Q96EP9 437 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 ZSWIM4Q9H7M6 989 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 RIPK3Q9Y572 518 aa17.27■□□□□ 0.36
CDH16-207ENST00000568632 ABCB11O95342 1321 aa17.27■□□□□ 0.35
CDH16-207ENST00000568632 MYH7BA7E2Y1 1941 aa17.27■□□□□ 0.35
CDH16-207ENST00000568632 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
CDH16-207ENST00000568632 IVLP07476 585 aa17.26■□□□□ 0.35
CDH16-207ENST00000568632 TRAF1Q13077 416 aa17.26■□□□□ 0.35
CDH16-207ENST00000568632 MCM6Q14566 821 aa17.26■□□□□ 0.35
CDH16-207ENST00000568632 LONRF3Q496Y0 759 aa17.26■□□□□ 0.35
CDH16-207ENST00000568632 HDXQ7Z353 690 aa17.26■□□□□ 0.35
CDH16-207ENST00000568632 EPSTI1Q96J88 318 aa17.26■□□□□ 0.35
CDH16-207ENST00000568632 UIMC1Q96RL1 719 aa17.26■□□□□ 0.35
CDH16-207ENST00000568632 GBA2Q9HCG7 927 aaPredicted RBP17.26■□□□□ 0.35
CDH16-207ENST00000568632 L1RE1Q9UN81 338 aa17.26■□□□□ 0.35
CDH16-207ENST00000568632 COL11A1P12107 1806 aaPredicted RBP17.26■□□□□ 0.35
CDH16-207ENST00000568632 ZNF18P17022 549 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms