RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 SP2Q02086 613 aa17.26■□□□□ 0.35
CCNDBP1-213ENST00000568507 KIAA0753Q2KHM9 967 aa17.26■□□□□ 0.35
CCNDBP1-213ENST00000568507 SYNE3Q6ZMZ3 975 aa17.26■□□□□ 0.35
CCNDBP1-213ENST00000568507 SRBD1Q8N5C6 995 aaKnown RBP17.26■□□□□ 0.35
CCNDBP1-213ENST00000568507 AFAP1L1Q8TED9 768 aa17.26■□□□□ 0.35
CCNDBP1-213ENST00000568507 GTF2IRD1Q9UHL9 959 aa17.26■□□□□ 0.35
CCNDBP1-213ENST00000568507 A0A0C4DFX4 3053 aa17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 PLEKHA8P1O95397 391 aa17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 F2P00734 622 aa17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 RXRAP19793 462 aa17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 UBA1P22314 1058 aaKnown RBP17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 RABGGTBP53611 331 aa17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 HSDL1Q3SXM5 330 aa17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 SKAP1Q86WV1 359 aa17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 CMTR1Q8N1G2 835 aaKnown RBP17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 VWCEQ96DN2 955 aa17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 LRRC2Q9BYS8 371 aa17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 RTEL1Q9NZ71 1219 aa17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 CDH23Q9H251 3354 aa17.25■□□□□ 0.35
CCNDBP1-213ENST00000568507 NOP56O00567 594 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-213ENST00000568507 SELPP16109 830 aa17.24■□□□□ 0.35
CCNDBP1-213ENST00000568507 NEDD9Q14511 834 aa17.24■□□□□ 0.35
CCNDBP1-213ENST00000568507 RAB11FIP4Q86YS3 637 aa17.24■□□□□ 0.35
CCNDBP1-213ENST00000568507 CCDC82Q8N4S0 544 aa17.24■□□□□ 0.35
CCNDBP1-213ENST00000568507 GPKOWQ92917 476 aaPredicted RBP eCLIP17.24■□□□□ 0.355e-6■□□□□ 9.8
CCNDBP1-213ENST00000568507 PRDM12Q9H4Q4 367 aa17.24■□□□□ 0.35
CCNDBP1-213ENST00000568507 YBX2Q9Y2T7 364 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-213ENST00000568507 PCDHA11Q9Y5I1 949 aa17.24■□□□□ 0.35
CCNDBP1-213ENST00000568507 SCN10AQ9Y5Y9 1956 aa17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 MYH6P13533 1939 aa17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 HAS3O00219 553 aa17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 PARNO95453 639 aaKnown RBP17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 HOXD8P13378 290 aaPredicted RBP17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 MRPS9P82933 396 aaKnown RBP17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 PTK7Q13308 1070 aa17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 XRRA1Q6P2D8 792 aa17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 LRRC8DQ7L1W4 858 aa17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 FANCBQ8NB91 859 aa17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 PHOSPHO2Q8TCD6 241 aa17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 NEK1Q96PY6 1258 aa17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 PSTPIP2Q9H939 334 aa17.23■□□□□ 0.35
CCNDBP1-213ENST00000568507 FRMPD4Q14CM0 1322 aa17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 SPATA31C2B4DYI2 1134 aa17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 PIK3CDO00329 1044 aa17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 FIBPO43427 364 aa17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 ICAM3P32942 547 aa17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 COL9A3Q14050 684 aaPredicted RBP17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 PPP2R2DQ66LE6 453 aa17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 CYFIP1Q7L576 1253 aa17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 NLRX1Q86UT6 975 aa17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 MICU3Q86XE3 530 aa17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 INPP4AQ96PE3 977 aaPredicted RBP17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 CTAGE1Q96RT6 745 aa17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 SLC9A7Q96T83 725 aa17.22■□□□□ 0.35
CCNDBP1-213ENST00000568507 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 MEIS2O14770 477 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 CDC45O75419 566 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 BAIAP3O94812 1187 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 CKBP12277 381 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 MYOGP15173 224 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 IGFBP4P22692 258 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 KCNJ6P48051 423 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 PCNX4Q63HM2 1172 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 METTL7BQ6UX53 244 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 TMTC3Q6ZXV5 915 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 SGMS1Q86VZ5 419 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 PPM1EQ8WY54 764 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 C16orf70Q9BSU1 422 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 USP26Q9BXU7 913 aa17.21■□□□□ 0.35
CCNDBP1-213ENST00000568507 hCG_1642624A0A1W2PR95 340 aa17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 C17orf102A2RUQ5 167 aa17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 H3BRB1 525 aa17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 ZNF200P98182 395 aaPredicted RBP17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 RBL2Q08999 1139 aa17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 KRT32Q14532 448 aa17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 DHX32Q7L7V1 743 aaKnown RBP17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 DHX38Q92620 1227 aaKnown RBP17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 TUT1Q9H6E5 874 aaKnown RBP17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 BCAS3Q9H6U6 928 aa17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 BAZ2BQ9UIF8 2168 aaKnown RBP17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 UNC80Q8N2C7 3258 aa17.2■□□□□ 0.34
CCNDBP1-213ENST00000568507 SPDYE3A6NKU9 549 aa17.19■□□□□ 0.34
CCNDBP1-213ENST00000568507 LGALS2P05162 132 aa17.19■□□□□ 0.34
CCNDBP1-213ENST00000568507 HEATR3Q7Z4Q2 680 aa17.19■□□□□ 0.34
CCNDBP1-213ENST00000568507 GIMAP8Q8ND71 665 aaPredicted RBP17.19■□□□□ 0.34
CCNDBP1-213ENST00000568507 SENP7Q9BQF6 1050 aa17.19■□□□□ 0.34
CCNDBP1-213ENST00000568507 KIAA1217Q5T5P2 1943 aa17.19■□□□□ 0.34
CCNDBP1-213ENST00000568507 ZBTB43O43298 467 aa17.18■□□□□ 0.34
CCNDBP1-213ENST00000568507 FGD1P98174 961 aa17.18■□□□□ 0.34
CCNDBP1-213ENST00000568507 SP4Q02446 784 aa17.18■□□□□ 0.34
CCNDBP1-213ENST00000568507 SEMA3FQ13275 785 aa17.18■□□□□ 0.34
CCNDBP1-213ENST00000568507 ZNF618Q5T7W0 954 aa17.18■□□□□ 0.34
CCNDBP1-213ENST00000568507 UTP14CQ5TAP6 766 aaKnown RBP17.18■□□□□ 0.34
CCNDBP1-213ENST00000568507 CNKSR3Q6P9H4 555 aa17.18■□□□□ 0.34
CCNDBP1-213ENST00000568507 HERC6Q8IVU3 1022 aa17.18■□□□□ 0.34
CCNDBP1-213ENST00000568507 ATP6V0A1Q93050 837 aa17.18■□□□□ 0.34
CCNDBP1-213ENST00000568507 CCDC136Q96JN2 1154 aa17.18■□□□□ 0.34
CCNDBP1-213ENST00000568507 CDHR1Q96JP9 859 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms