RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947		F8W031	263 aa	Predicted RBP	6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	KCNH1	O95259	989 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	BMP7	P18075	431 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	NCKAP1L	P55160	1127 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	HTRA3	P83110	453 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	CYP4F3	Q08477	520 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	GTF2IRD2B	Q6EKJ0	949 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	GTF2IRD2	Q86UP8	949 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	UBE2Q2	Q8WVN8	375 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	C20orf173	Q96LM9	149 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	PWWP2A	Q96N64	755 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	ZCCHC4	Q9H5U6	513 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	CYP26B1	Q9NR63	512 aa		6.66	□□□□□ -1.34
CBFB-208	ENST00000567947	DHX29	Q7Z478	1369 aa	Known RBP	6.66	□□□□□ -1.34
CBFB-208	ENST00000567947		A0A0G2JLL6	359 aa	Predicted RBP	6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	LOC105371045	A0A1W2PR82	267 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	ZC3H12D	A2A288	527 aa	Known RBP	6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	NOP56	O00567	594 aa	Known RBP	6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	NPHS1	O60500	1241 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	SCRN1	Q12765	414 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	GNL2	Q13823	731 aa	Known RBP	6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	SLC9A5	Q14940	896 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	TESK1	Q15569	626 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	MBLAC2	Q68D91	279 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	WWC2	Q6AWC2	1192 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	C6orf15	Q6UXA7	325 aa	Predicted RBP	6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	CPNE8	Q86YQ8	564 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	SP8	Q8IXZ3	490 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	NLGN1	Q8N2Q7	840 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	NPLOC4	Q8TAT6	608 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	CPA5	Q8WXQ8	436 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	PEX11G	Q96HA9	241 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	XYLT2	Q9H1B5	865 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	LUC7L	Q9NQ29	371 aa	Known RBP	6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	RTEL1	Q9NZ71	1219 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	GULP1	Q9UBP9	304 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	NUDT5	Q9UKK9	219 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	RWDD3	Q9Y3V2	267 aa		6.65	□□□□□ -1.34
CBFB-208	ENST00000567947	SPAG9	O60271	1321 aa	Known RBP	6.65	□□□□□ -1.35
CBFB-208	ENST00000567947	ERBIN	Q96RT1	1412 aa		6.65	□□□□□ -1.35
CBFB-208	ENST00000567947	PLA2R1	Q13018	1463 aa		6.65	□□□□□ -1.35
CBFB-208	ENST00000567947	PRDM15	P57071	1507 aa	Predicted RBP	6.65	□□□□□ -1.35
CBFB-208	ENST00000567947	DUOX2	Q9NRD8	1548 aa		6.65	□□□□□ -1.35
CBFB-208	ENST00000567947	SSB	P05455	408 aa	Known RBP eCLIP	6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	THBD	P07204	575 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	ASGR2	P07307	311 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	NCAM1	P13591	858 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	PLS3	P13797	630 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	ATF2	P15336	505 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	CTSW	P56202	376 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	FAM178B	Q8IXR5	827 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	AFAP1	Q8N556	730 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	TP53I13	Q8NBR0	393 aa	Predicted RBP	6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	CLEC1B	Q9P126	229 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	FANCI	Q9NVI1	1328 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	ARHGAP31	Q2M1Z3	1444 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	LMTK2	Q8IWU2	1503 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	VWDE	Q8N2E2	1590 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	PTPN23	Q9H3S7	1636 aa		6.64	□□□□□ -1.35
CBFB-208	ENST00000567947	NCAN	O14594	1321 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	FFAR3	O14843	346 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	SUSD5	O60279	629 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	ZBTB7A	O95365	584 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	PLA2G1B	P04054	148 aa	Known RBP	6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	SCG5	P05408	212 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	PZP	P20742	1482 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	LIMS1	P48059	325 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	VWA3B	Q502W6	1294 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	IQSEC2	Q5JU85	1478 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	E4F1	Q66K89	784 aa	Predicted RBP	6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	FGD6	Q6ZV73	1430 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	B3GNT8	Q7Z7M8	397 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	ZNF227	Q86WZ6	799 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947		Q8N1Y9	231 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	MROH1	Q8NDA8	1641 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	PLEKHO2	Q8TD55	490 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	FRS2	Q8WU20	508 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	ALG3	Q92685	438 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947	MRVI1	Q9Y6F6	885 aa		6.63	□□□□□ -1.35
CBFB-208	ENST00000567947		B2RBV5	119 aa		6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	CAPNS1	P04632	268 aa		6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	PML	P29590	882 aa		6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	ETFB	P38117	255 aa		6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	RANGAP1	P46060	587 aa	Predicted RBP	6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	FOXO4	P98177	505 aa		6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	MRM1	Q6IN84	353 aa	Known RBP	6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	IQCE	Q6IPM2	695 aa		6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	FNIP1	Q8TF40	1166 aa		6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	DPF3	Q92784	378 aa		6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	GPRC5C	Q9NQ84	441 aa		6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	DBR1	Q9UK59	544 aa	Known RBP	6.62	□□□□□ -1.35
CBFB-208	ENST00000567947	NLRP1	Q9C000	1473 aa		6.61	□□□□□ -1.35
CBFB-208	ENST00000567947	PTPRT	O14522	1441 aa		6.61	□□□□□ -1.35
CBFB-208	ENST00000567947	PTPRK	Q15262	1439 aa		6.61	□□□□□ -1.35
CBFB-208	ENST00000567947	ROCK1	Q13464	1354 aa		6.61	□□□□□ -1.35
CBFB-208	ENST00000567947	SH3D21	A4FU49	640 aa		6.61	□□□□□ -1.35
CBFB-208	ENST00000567947	SASH1	O94885	1247 aa		6.61	□□□□□ -1.35
CBFB-208	ENST00000567947	ITGAV	P06756	1048 aa		6.61	□□□□□ -1.35
CBFB-208	ENST00000567947	HOXC12	P31275	282 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms