RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 SP2Q02086 613 aa19.66■□□□□ 0.74
COMMD4-220ENST00000567720 MLLT1Q03111 559 aaPredicted RBP19.66■□□□□ 0.74
COMMD4-220ENST00000567720 KCNA10Q16322 511 aa19.66■□□□□ 0.74
COMMD4-220ENST00000567720 AP5M1Q9H0R1 490 aa19.66■□□□□ 0.74
COMMD4-220ENST00000567720 SPATA31C2B4DYI2 1134 aa19.65■□□□□ 0.74
COMMD4-220ENST00000567720 GH1P01241 217 aa19.65■□□□□ 0.74
COMMD4-220ENST00000567720 ASGR1P07306 291 aa19.65■□□□□ 0.74
COMMD4-220ENST00000567720 XBP1P17861 261 aa19.65■□□□□ 0.74
COMMD4-220ENST00000567720 ACLYP53396 1101 aa19.65■□□□□ 0.74
COMMD4-220ENST00000567720 HMGN5P82970 282 aaKnown RBP19.65■□□□□ 0.74
COMMD4-220ENST00000567720 MCTP2Q6DN12 878 aa19.65■□□□□ 0.74
COMMD4-220ENST00000567720 GALNT17Q6IS24 598 aa19.65■□□□□ 0.74
COMMD4-220ENST00000567720 CYP2W1Q8TAV3 490 aa19.65■□□□□ 0.74
COMMD4-220ENST00000567720 OXER1Q8TDS5 423 aa19.65■□□□□ 0.74
COMMD4-220ENST00000567720 FERMT2Q96AC1 680 aa19.65■□□□□ 0.74
COMMD4-220ENST00000567720 GPRASP2Q96D09 838 aa19.65■□□□□ 0.74
COMMD4-220ENST00000567720 TSEN34Q9BSV6 310 aaKnown RBP19.65■□□□□ 0.74
COMMD4-220ENST00000567720 MOXD2PA6NHM9 499 aa19.64■□□□□ 0.73
COMMD4-220ENST00000567720 SORBS3O60504 671 aa19.64■□□□□ 0.73
COMMD4-220ENST00000567720 GGPS1O95749 300 aa19.64■□□□□ 0.73
COMMD4-220ENST00000567720 GNASQ5JWF2 1037 aa19.64■□□□□ 0.73
COMMD4-220ENST00000567720 KCNV1Q6PIU1 500 aa19.64■□□□□ 0.73
COMMD4-220ENST00000567720 EMID1Q96A84 441 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-220ENST00000567720 SENP6Q9GZR1 1112 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-220ENST00000567720 BCAS3Q9H6U6 928 aa19.64■□□□□ 0.73
COMMD4-220ENST00000567720 IGLV3-22A0A075B6J6 115 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 A6NJR5 290 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 FAM86B1E9PN63 330 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 EDIL3O43854 480 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 MMP1P03956 469 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 MMP3P08254 477 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 CYP3A4P08684 503 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 FAM86B2P0C5J1 330 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 TGFB3P10600 412 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 KCNA2P16389 499 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 CPT1AP50416 773 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 MTMR1Q13613 665 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 LRRC26Q2I0M4 334 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 CEP55Q53EZ4 464 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 KRT40Q6A162 431 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 NLRX1Q86UT6 975 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 PCSK9Q8NBP7 692 aaKnown RBP19.63■□□□□ 0.73
COMMD4-220ENST00000567720 AFG1LQ8WV93 481 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 MXRA8Q9BRK3 442 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 JADE2Q9NQC1 790 aa19.63■□□□□ 0.73
COMMD4-220ENST00000567720 ATN1P54259 1190 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-220ENST00000567720 NR5A1Q13285 461 aa19.62■□□□□ 0.73
COMMD4-220ENST00000567720 SNX17Q15036 470 aa19.62■□□□□ 0.73
COMMD4-220ENST00000567720 CELF3Q5SZQ8 465 aaKnown RBP19.62■□□□□ 0.73
COMMD4-220ENST00000567720 MYSM1Q5VVJ2 828 aa19.62■□□□□ 0.73
COMMD4-220ENST00000567720 CXCL17Q6UXB2 119 aa19.62■□□□□ 0.73
COMMD4-220ENST00000567720 TBCKQ8TEA7 893 aa19.62■□□□□ 0.73
COMMD4-220ENST00000567720 TNFRSF25Q93038 417 aa19.62■□□□□ 0.73
COMMD4-220ENST00000567720 FAM205CA6NFA0 338 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 ATP9AO75110 1047 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 KRT2P35908 639 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 PURAQ00577 322 aaKnown RBP19.61■□□□□ 0.73
COMMD4-220ENST00000567720 GUCY1B3Q02153 619 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 HSDL1Q3SXM5 330 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 EARS2Q5JPH6 523 aaKnown RBP19.61■□□□□ 0.73
COMMD4-220ENST00000567720 KRT25Q7Z3Z0 450 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 DHX37Q8IY37 1157 aaKnown RBP19.61■□□□□ 0.73
COMMD4-220ENST00000567720 PPTC7Q8NI37 304 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 LENG9Q96B70 501 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 CDHR1Q96JP9 859 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 HTATIP2Q9BUP3 242 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 KCNH7Q9NS40 1196 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 PKD2L1Q9P0L9 805 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 TELO2Q9Y4R8 837 aa19.61■□□□□ 0.73
COMMD4-220ENST00000567720 MEIS1O00470 390 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 ARP10275 920 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 HOXD8P13378 290 aaPredicted RBP19.6■□□□□ 0.73
COMMD4-220ENST00000567720 CIITAP33076 1130 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 CUL4AQ13619 759 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 LAMC2Q13753 1193 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 TRIM29Q14134 588 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 NONOQ15233 471 aaKnown RBP eCLIP19.6■□□□□ 0.73
COMMD4-220ENST00000567720 METTL7BQ6UX53 244 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 NIPA1Q7RTP0 329 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 DIS3L2Q8IYB7 885 aaKnown RBP19.6■□□□□ 0.73
COMMD4-220ENST00000567720 FAM184AQ8NB25 1140 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 C8orf76Q96K31 380 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 SENP7Q9BQF6 1050 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 STARD7Q9NQZ5 370 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 TANC1Q9C0D5 1861 aa19.6■□□□□ 0.73
COMMD4-220ENST00000567720 MYH9P35579 1960 aaKnown RBP19.59■□□□□ 0.73
COMMD4-220ENST00000567720 TRIP12Q14669 1992 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-220ENST00000567720 MYH15Q9Y2K3 1946 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 ZEB2O60315 1214 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 MYL3P08590 195 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 ZNF76P36508 570 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 ITGB3BPQ13352 177 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-220ENST00000567720 NEDD9Q14511 834 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 INF2Q27J81 1249 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 SLC39A5Q6ZMH5 540 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 PIK3AP1Q6ZUJ8 805 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 CYFIP1Q7L576 1253 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 GLT1D1Q96MS3 346 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 SPATA33Q96N06 139 aa19.59■□□□□ 0.73
COMMD4-220ENST00000567720 AGO4Q9HCK5 861 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms