RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 GGPS1O95749 300 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 CYP2C9P11712 490 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 PRKCSHP14314 528 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-209ENST00000567635 HSPA4P34932 840 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 MRPS9P82933 396 aaKnown RBP7.96□□□□□ -1.14
SF3B3-209ENST00000567635 FGD1P98174 961 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 PTGISQ16647 500 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 GNPTABQ3T906 1256 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 PCNX4Q63HM2 1172 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 PSRC1Q6PGN9 363 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-209ENST00000567635 MICU3Q86XE3 530 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 RETREG2Q8NC44 543 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 PPP1R13LQ8WUF5 828 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 KAT2BQ92831 832 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 TCEANC2Q96MN5 208 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 SPATA33Q96N06 139 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 MLXIPQ9HAP2 919 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 PPP4R2Q9NY27 417 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 RTEL1Q9NZ71 1219 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 V9GY48 417 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-209ENST00000567635 FRMPD4Q14CM0 1322 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 UMODL1Q5DID0 1318 aa7.96□□□□□ -1.14
SF3B3-209ENST00000567635 WDR81Q562E7 1941 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 EVPLQ92817 2033 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 KLF18A0A0U1RQI7 1052 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 CCDC196A0A1B0GTZ2 297 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 SORBS3O60504 671 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 HOXD8P13378 290 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-209ENST00000567635 CPA1P15085 419 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 PSMA5P28066 241 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 ICAM3P32942 547 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 PSEN2P49810 448 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 RCAN1P53805 252 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 NEDD9Q14511 834 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 RTN1Q16799 776 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 HSDL1Q3SXM5 330 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 ZNF697Q5TEC3 545 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 RASIP1Q5U651 963 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 BLOC1S2Q6QNY1 142 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 HEATR3Q7Z4Q2 680 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 NLRX1Q86UT6 975 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 SESTD1Q86VW0 696 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 C7orf31Q8N865 590 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 HERVK_113Q902F9 699 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 GPKOWQ92917 476 aaPredicted RBP eCLIP7.95□□□□□ -1.142e-6■■■□□ 15
SF3B3-209ENST00000567635 FAM161BQ96MY7 647 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 JAKMIP1Q96N16 626 aaKnown RBP7.95□□□□□ -1.14
SF3B3-209ENST00000567635 INPP4AQ96PE3 977 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-209ENST00000567635 ALG1Q9BT22 464 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 KATNAL1Q9BW62 490 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 WNT8AQ9H1J5 351 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 MTIF3Q9H2K0 278 aaKnown RBP7.95□□□□□ -1.14
SF3B3-209ENST00000567635 SEMA6BQ9H3T3 888 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 BCAS3Q9H6U6 928 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 FAM217BQ9NTX9 383 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-209ENST00000567635 HDAC6Q9UBN7 1215 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 NAP1L2Q9ULW6 460 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-209ENST00000567635 NOD1Q9Y239 953 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 STXBP5LQ9Y2K9 1186 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 SNX14Q9Y5W7 946 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 LAMA3Q16787 3333 aa7.95□□□□□ -1.14
SF3B3-209ENST00000567635 LAMA2P24043 3122 aaKnown RBP7.94□□□□□ -1.14
SF3B3-209ENST00000567635 LOXHD1Q8IVV2 1947 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 SPDYE3A6NKU9 549 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 GOLGA8AA7E2F4 631 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 GOLGA8BA8MQT2 603 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 HAS3O00219 553 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 PITPNM1O00562 1244 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 NOP56O00567 594 aaKnown RBP7.94□□□□□ -1.14
SF3B3-209ENST00000567635 FIBPO43427 364 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 EPB41L2O43491 1005 aaKnown RBP7.94□□□□□ -1.14
SF3B3-209ENST00000567635 PFKMP08237 780 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 IQCF3P0C7M6 154 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 ZNF286BP0CG31 522 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 UBA1P22314 1058 aaKnown RBP7.94□□□□□ -1.14
SF3B3-209ENST00000567635 CDC27P30260 824 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 RFC2P35250 354 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 APOBRQ0VD83 1088 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 FUT2Q10981 343 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 BFSP2Q13515 415 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 MFSD10Q14728 455 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 KIAA0753Q2KHM9 967 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 GDF6Q6KF10 455 aaPredicted RBP7.94□□□□□ -1.14
SF3B3-209ENST00000567635 Q6ZUG5 572 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 CYFIP1Q7L576 1253 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 OTOP2Q7RTS6 562 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 TEX2Q8IWB9 1127 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 FBXL16Q8N461 479 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 CCDC155Q8N6L0 562 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 GIMAP8Q8ND71 665 aaPredicted RBP7.94□□□□□ -1.14
SF3B3-209ENST00000567635 SCLYQ96I15 445 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 SENP7Q9BQF6 1050 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 C16orf70Q9BSU1 422 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 ANP32EQ9BTT0 268 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 USP26Q9BXU7 913 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 RIC8AQ9NPQ8 531 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 GTF2IRD1Q9UHL9 959 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 PCDHA6Q9UN73 950 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 PCDHA8Q9Y5H6 950 aa7.94□□□□□ -1.14
SF3B3-209ENST00000567635 TMEM265A0A087WTH1 108 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms