RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 RIPK3Q9Y572 518 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 MYPNQ86TC9 1320 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 MED24O75448 989 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 EIF2AK2P19525 551 aaKnown RBP13.14□□□□□ -0.31
BBS4-213ENST00000567279 PLS1Q14651 629 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 HSP90AA4PQ58FG1 418 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 LRCH2Q5VUJ6 765 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 RNF207Q6ZRF8 634 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 PNMA8AQ86V59 439 aaPredicted RBP13.14□□□□□ -0.31
BBS4-213ENST00000567279 ZSCAN30Q86W11 494 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 ERO1BQ86YB8 467 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 SAMD3Q8N6K7 520 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 MED15Q96RN5 788 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 XPO4Q9C0E2 1151 aaKnown RBP13.14□□□□□ -0.31
BBS4-213ENST00000567279 MAP3K20Q9NYL2 800 aaKnown RBP13.14□□□□□ -0.31
BBS4-213ENST00000567279 ZNF214Q9UL59 606 aaPredicted RBP13.14□□□□□ -0.31
BBS4-213ENST00000567279 ADAMTS5Q9UNA0 930 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 KIAA1024Q9UPX6 916 aa13.14□□□□□ -0.31
BBS4-213ENST00000567279 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 POTEFA5A3E0 1075 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 MYMKA6NI61 221 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 SPDYE5A6NIY4 337 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 E9PMD0 336 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 IRF6O14896 467 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 CHMP2AO43633 222 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 RHOBTB3O94955 611 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 SERPINC1P01008 464 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 SSBP05455 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
BBS4-213ENST00000567279 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 PPATQ06203 517 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 PDE4DQ08499 809 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 POTEGQ6S5H5 508 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 ARMC9Q7Z3E5 817 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 SLC5A5Q92911 643 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 TAAR1Q96RJ0 339 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 MXRA8Q9BRK3 442 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 HOXC10Q9NYD6 342 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 STK24Q9Y6E0 443 aa13.13□□□□□ -0.31
BBS4-213ENST00000567279 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
BBS4-213ENST00000567279 A0A0G2JLL6 359 aaPredicted RBP13.12□□□□□ -0.31
BBS4-213ENST00000567279 MEIS1O00470 390 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 GAS7O60861 476 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 ARP10275 920 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 MSNP26038 577 aaKnown RBP13.12□□□□□ -0.31
BBS4-213ENST00000567279 PAK1Q13153 545 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 TPD52L1Q16890 204 aaPredicted RBP13.12□□□□□ -0.31
BBS4-213ENST00000567279 DYMQ7RTS9 669 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 PRRT2Q7Z6L0 340 aaPredicted RBP13.12□□□□□ -0.31
BBS4-213ENST00000567279 NELFBQ8WX92 580 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 ZNF577Q9BSK1 485 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 LRRC27Q9C0I9 530 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 MAPK8IP1Q9UQF2 711 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 SRCAPQ6ZRS2 3230 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 ATP2A1O14983 1001 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 CBFA2T2O43439 604 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 COBLO75128 1261 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 PSMD10O75832 226 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 CDK11BP21127 795 aaKnown RBP13.12□□□□□ -0.31
BBS4-213ENST00000567279 PRCPP42785 496 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 SEMA3FQ13275 785 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 PPIL2Q13356 520 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 STIM1Q13586 685 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 BAATQ14032 418 aaPredicted RBP13.12□□□□□ -0.31
BBS4-213ENST00000567279 SPATA1Q5VX52 437 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 PCNX4Q63HM2 1172 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 PROCA1Q8NCQ7 364 aaPredicted RBP13.12□□□□□ -0.31
BBS4-213ENST00000567279 GIMAP8Q8ND71 665 aaPredicted RBP13.12□□□□□ -0.31
BBS4-213ENST00000567279 ZNF830Q96NB3 372 aaPredicted RBP13.12□□□□□ -0.31
BBS4-213ENST00000567279 RMDN3Q96TC7 470 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 ZNF408Q9H9D4 720 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 SAMSN1Q9NSI8 373 aaKnown RBP13.12□□□□□ -0.31
BBS4-213ENST00000567279 PKD2L1Q9P0L9 805 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 NRBP1Q9UHY1 535 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 RWDD2AQ9UIY3 292 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 ZKSCAN5Q9Y2L8 839 aa13.12□□□□□ -0.31
BBS4-213ENST00000567279 EML1O00423 815 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 TPM3P06753 285 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 PLA2G4BP0C869 781 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 MYCLP12524 364 aaPredicted RBP13.11□□□□□ -0.31
BBS4-213ENST00000567279 ZNF18P17022 549 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 PTGS1P23219 599 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 RPA1P27694 616 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 CYP4A11Q02928 519 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 PGM5Q15124 567 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 TKFCQ3LXA3 575 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 ARHGEF16Q5VV41 709 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 UNC13DQ70J99 1090 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 CATSPER3Q86XQ3 398 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 ADSSL1Q8N142 457 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 FAM43AQ8N2R8 423 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 DDX12PQ92771 950 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 OPTNQ96CV9 577 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 PURBQ96QR8 312 aaKnown RBP13.11□□□□□ -0.31
BBS4-213ENST00000567279 EIF2AK1Q9BQI3 630 aaKnown RBP13.11□□□□□ -0.31
BBS4-213ENST00000567279 TEKT3Q9BXF9 490 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms