RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 USP11P51784 963 aa19.05■□□□□ 0.64
CLN6-208ENST00000567060 ANO1Q5XXA6 986 aa19.05■□□□□ 0.64
CLN6-208ENST00000567060 ARRDC4Q8NCT1 418 aa19.05■□□□□ 0.64
CLN6-208ENST00000567060 BADQ92934 168 aa19.05■□□□□ 0.64
CLN6-208ENST00000567060 CDHR1Q96JP9 859 aa19.05■□□□□ 0.64
CLN6-208ENST00000567060 NAP1L4Q99733 375 aaKnown RBP19.05■□□□□ 0.64
CLN6-208ENST00000567060 KATNBL1Q9H079 304 aa19.05■□□□□ 0.64
CLN6-208ENST00000567060 KCNJ14Q9UNX9 436 aa19.05■□□□□ 0.64
CLN6-208ENST00000567060 LRRC37A2A6NM11 1700 aa19.05■□□□□ 0.64
CLN6-208ENST00000567060 CCDC194A0A1B0GVG4 234 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 RBM47A0AV96 593 aaKnown RBP19.04■□□□□ 0.64
CLN6-208ENST00000567060 TRIM43BA6NCK2 446 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 NKRFO15226 690 aaKnown RBP eCLIP19.04■□□□□ 0.649e-7■■■■□ 22.5
CLN6-208ENST00000567060 ZNF865P0CJ78 1059 aaPredicted RBP19.04■□□□□ 0.64
CLN6-208ENST00000567060 TGFB3P10600 412 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 AKR1A1P14550 325 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 SNX17Q15036 470 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 NONOQ15233 471 aaKnown RBP eCLIP19.04■□□□□ 0.646e-7■■■□□ 17.3
CLN6-208ENST00000567060 JAKMIP3Q5VZ66 844 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 LARP1BQ659C4 914 aaKnown RBP19.04■□□□□ 0.64
CLN6-208ENST00000567060 IQSEC1Q6DN90 963 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 MOXD1Q6UVY6 613 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 NIPA1Q7RTP0 329 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 SH3RF1Q7Z6J0 888 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 NLRX1Q86UT6 975 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 DIS3L2Q8IYB7 885 aaKnown RBP19.04■□□□□ 0.64
CLN6-208ENST00000567060 SCFD2Q8WU76 684 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 CRYGNQ8WXF5 182 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 TTC28Q96AY4 2481 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 TRIM43Q96BQ3 446 aaPredicted RBP19.04■□□□□ 0.64
CLN6-208ENST00000567060 FAM184BQ9ULE4 1060 aa19.04■□□□□ 0.64
CLN6-208ENST00000567060 H3BQV1 296 aa19.03■□□□□ 0.64
CLN6-208ENST00000567060 ARHGAP4P98171 946 aa19.03■□□□□ 0.64
CLN6-208ENST00000567060 TRIM60Q495X7 471 aa19.03■□□□□ 0.64
CLN6-208ENST00000567060 PRAMEF19Q5SWL8 479 aa19.03■□□□□ 0.64
CLN6-208ENST00000567060 MAFAQ8NHW3 353 aaPredicted RBP19.03■□□□□ 0.64
CLN6-208ENST00000567060 MYLIPQ8WY64 445 aa19.03■□□□□ 0.64
CLN6-208ENST00000567060 GPRASP2Q96D09 838 aa19.03■□□□□ 0.64
CLN6-208ENST00000567060 INPP4AQ96PE3 977 aaPredicted RBP19.03■□□□□ 0.64
CLN6-208ENST00000567060 Q9Y3F1 56 aa19.03■□□□□ 0.64
CLN6-208ENST00000567060 KIAA1217Q5T5P2 1943 aa19.03■□□□□ 0.64
CLN6-208ENST00000567060 MYCLP12524 364 aaPredicted RBP19.02■□□□□ 0.64
CLN6-208ENST00000567060 ICAM3P32942 547 aa19.02■□□□□ 0.64
CLN6-208ENST00000567060 CIITAP33076 1130 aa19.02■□□□□ 0.64
CLN6-208ENST00000567060 ANP32AP39687 249 aaKnown RBP19.02■□□□□ 0.64
CLN6-208ENST00000567060 ADCYAP1R1P41586 468 aa19.02■□□□□ 0.64
CLN6-208ENST00000567060 SMAD3P84022 425 aaKnown RBP19.02■□□□□ 0.64
CLN6-208ENST00000567060 TTLL4Q14679 1199 aa19.02■□□□□ 0.64
CLN6-208ENST00000567060 PRDM5Q9NQX1 630 aaPredicted RBP19.02■□□□□ 0.64
CLN6-208ENST00000567060 PDLIM7Q9NR12 457 aa19.02■□□□□ 0.64
CLN6-208ENST00000567060 TMEM260Q9NX78 707 aa19.02■□□□□ 0.64
CLN6-208ENST00000567060 ZHX1Q9UKY1 873 aaPredicted RBP19.02■□□□□ 0.64
CLN6-208ENST00000567060 FIBPO43427 364 aa19.01■□□□□ 0.63
CLN6-208ENST00000567060 GCFC2P16383 781 aaKnown RBP19.01■□□□□ 0.63
CLN6-208ENST00000567060 ITGB8P26012 769 aa19.01■□□□□ 0.63
CLN6-208ENST00000567060 U2AF2P26368 475 aaKnown RBP eCLIP19.01■□□□□ 0.63
CLN6-208ENST00000567060 MRPS9P82933 396 aaKnown RBP19.01■□□□□ 0.63
CLN6-208ENST00000567060 SETQ01105 290 aaPredicted RBP19.01■□□□□ 0.63
CLN6-208ENST00000567060 TAPT1Q6NXT6 567 aa19.01■□□□□ 0.63
CLN6-208ENST00000567060 TNFRSF25Q93038 417 aa19.01■□□□□ 0.63
CLN6-208ENST00000567060 GJB4Q9NTQ9 266 aa19.01■□□□□ 0.63
CLN6-208ENST00000567060 UBIAD1Q9Y5Z9 338 aa19.01■□□□□ 0.63
CLN6-208ENST00000567060 MYH7BA7E2Y1 1941 aa19■□□□□ 0.63
CLN6-208ENST00000567060 BTBD18B2RXH4 712 aa19■□□□□ 0.63
CLN6-208ENST00000567060 KBTBD13C9JR72 458 aa19■□□□□ 0.63
CLN6-208ENST00000567060 DUSP11O75319 330 aaKnown RBP19■□□□□ 0.63
CLN6-208ENST00000567060 TRAPPC10P48553 1259 aa19■□□□□ 0.63
CLN6-208ENST00000567060 ORC2Q13416 577 aaPredicted RBP19■□□□□ 0.63
CLN6-208ENST00000567060 GNL2Q13823 731 aaKnown RBP19■□□□□ 0.63
CLN6-208ENST00000567060 LRRC41Q15345 812 aa19■□□□□ 0.63
CLN6-208ENST00000567060 CCDC144BQ3MJ40 725 aa19■□□□□ 0.63
CLN6-208ENST00000567060 CEP55Q53EZ4 464 aa19■□□□□ 0.63
CLN6-208ENST00000567060 C1orf53Q5VUE5 145 aa19■□□□□ 0.63
CLN6-208ENST00000567060 NEK8Q86SG6 692 aa19■□□□□ 0.63
CLN6-208ENST00000567060 FBXO16Q8IX29 292 aaPredicted RBP19■□□□□ 0.63
CLN6-208ENST00000567060 GIMAP8Q8ND71 665 aaPredicted RBP19■□□□□ 0.63
CLN6-208ENST00000567060 IL31RAQ8NI17 732 aa19■□□□□ 0.63
CLN6-208ENST00000567060 RASGRP4Q8TDF6 673 aa19■□□□□ 0.63
CLN6-208ENST00000567060 TBCKQ8TEA7 893 aa19■□□□□ 0.63
CLN6-208ENST00000567060 FERMT2Q96AC1 680 aa19■□□□□ 0.63
CLN6-208ENST00000567060 SENP7Q9BQF6 1050 aa19■□□□□ 0.63
CLN6-208ENST00000567060 MXRA8Q9BRK3 442 aa19■□□□□ 0.63
CLN6-208ENST00000567060 JADE2Q9NQC1 790 aa19■□□□□ 0.63
CLN6-208ENST00000567060 CYP3A7-CYP3A51PA0A087WV96 503 aa18.99■□□□□ 0.63
CLN6-208ENST00000567060 RARBP10826 455 aa18.99■□□□□ 0.63
CLN6-208ENST00000567060 CYP3A7P24462 503 aa18.99■□□□□ 0.63
CLN6-208ENST00000567060 ZNF76P36508 570 aa18.99■□□□□ 0.63
CLN6-208ENST00000567060 EPHB4P54760 987 aa18.99■□□□□ 0.63
CLN6-208ENST00000567060 NKX3-2P78367 333 aa18.99■□□□□ 0.63
CLN6-208ENST00000567060 TNFAIP2Q03169 654 aa18.99■□□□□ 0.63
CLN6-208ENST00000567060 DUSP28Q4G0W2 176 aa18.99■□□□□ 0.63
CLN6-208ENST00000567060 NOSTRINQ8IVI9 506 aa18.99■□□□□ 0.63
CLN6-208ENST00000567060 OXER1Q8TDS5 423 aa18.99■□□□□ 0.63
CLN6-208ENST00000567060 WDR11Q9BZH6 1224 aa18.99■□□□□ 0.63
CLN6-208ENST00000567060 PRDM6Q9NQX0 595 aa18.99■□□□□ 0.63
CLN6-208ENST00000567060 SPATA31C2B4DYI2 1134 aa18.98■□□□□ 0.63
CLN6-208ENST00000567060 MEIS1O00470 390 aa18.98■□□□□ 0.63
CLN6-208ENST00000567060 DTNBO60941 627 aa18.98■□□□□ 0.63
CLN6-208ENST00000567060 MYCNP04198 464 aaPredicted RBP18.98■□□□□ 0.63
CLN6-208ENST00000567060 TLE2Q04725 743 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms