RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 RASGRF1Q13972 1273 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 HGSNATQ68CP4 663 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 CENPPQ6IPU0 288 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 HIBCHQ6NVY1 386 aaPredicted RBP27.51■■□□□ 1.99
FANCA-221ENST00000566889 TAF4BQ92750 862 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 TRIM9Q9C026 710 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 NOVA2Q9UNW9 492 aaKnown RBP27.51■■□□□ 1.99
FANCA-221ENST00000566889 KCPQ6ZWJ8 1503 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 PLCH1Q4KWH8 1693 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 A0A0G2JS52 829 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 FRMD3A2A2Y4 597 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 LAD1O00515 517 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 ECM2O94769 699 aaPredicted RBP27.51■■□□□ 1.99
FANCA-221ENST00000566889 CTSWP56202 376 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 PPP1R7Q15435 360 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 CCDC178Q5BJE1 867 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 CACNA2D4Q7Z3S7 1137 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 SRBD1Q8N5C6 995 aaKnown RBP27.51■■□□□ 1.99
FANCA-221ENST00000566889 OR2W6PQ8NHA6 318 aa27.51■■□□□ 1.99
FANCA-221ENST00000566889 MINDY4BA8MYZ0 360 aa27.5■■□□□ 1.99
FANCA-221ENST00000566889 FTCDO95954 541 aa27.5■■□□□ 1.99
FANCA-221ENST00000566889 PCP11498 1178 aaKnown RBP27.5■■□□□ 1.99
FANCA-221ENST00000566889 KLHL7Q8IXQ5 586 aa27.5■■□□□ 1.99
FANCA-221ENST00000566889 BLIDQ8IZY5 108 aa27.5■■□□□ 1.99
FANCA-221ENST00000566889 CALR3Q96L12 384 aaKnown RBP27.5■■□□□ 1.99
FANCA-221ENST00000566889 ATP2C2O75185 946 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 SLC5A1P13866 664 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 ITIH4Q14624 930 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 STAG2Q8N3U4 1231 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 CCDC63Q8NA47 563 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 SLC12A4Q9UP95 1085 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 MROH5Q6ZUA9 1318 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 DLEC1Q9Y238 1755 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 SERPING1P05155 500 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 AMPD3Q01432 767 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 ACCSLQ4AC99 568 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 TDRD12Q587J7 1177 aaKnown RBP27.49■■□□□ 1.99
FANCA-221ENST00000566889 NSMCE1Q8WV22 266 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 C15orf41Q9Y2V0 281 aa27.49■■□□□ 1.99
FANCA-221ENST00000566889 PP2D1A8MPX8 630 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 PHF20L1A8MW92 1017 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 CSB-PGBD3P0DP91 1061 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 PRPHP41219 470 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 MAGOHP61326 146 aaKnown RBP27.48■■□□□ 1.99
FANCA-221ENST00000566889 ASIC1P78348 528 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 SARNPP82979 210 aaKnown RBP27.48■■□□□ 1.99
FANCA-221ENST00000566889 ERMARDQ5T6L9 678 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 SCFD2Q8WU76 684 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 MAGOHBQ96A72 148 aaKnown RBP27.48■■□□□ 1.99
FANCA-221ENST00000566889 PBKQ96KB5 322 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 ORAI2Q96SN7 254 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 PSMD1Q99460 953 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 SH3GLB2Q9NR46 395 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.48■■□□□ 1.99
FANCA-221ENST00000566889 F8W031 263 aaPredicted RBP27.48■■□□□ 1.99
FANCA-221ENST00000566889 CCNHP51946 323 aaPredicted RBP27.48■■□□□ 1.99
FANCA-221ENST00000566889 EHHADHQ08426 723 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 CYB5RLQ6IPT4 315 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 KIF6Q6ZMV9 814 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 UBLCP1Q8WVY7 318 aaPredicted RBP27.48■■□□□ 1.99
FANCA-221ENST00000566889 TBC1D31Q96DN5 1066 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 AK8Q96MA6 479 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 FAM129AQ9BZQ8 928 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 SEMA6BQ9H3T3 888 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 DUOX1Q9NRD9 1551 aa27.48■■□□□ 1.99
FANCA-221ENST00000566889 ASAP2O43150 1006 aa27.47■■□□□ 1.99
FANCA-221ENST00000566889 XPO6Q96QU8 1125 aaKnown RBP27.47■■□□□ 1.99
FANCA-221ENST00000566889 FBXL5Q9UKA1 691 aa27.47■■□□□ 1.99
FANCA-221ENST00000566889 RREB1Q92766 1687 aa27.47■■□□□ 1.99
FANCA-221ENST00000566889 EIF3BP55884 814 aaKnown RBP27.47■■□□□ 1.99
FANCA-221ENST00000566889 SPDYCQ5MJ68 293 aa27.47■■□□□ 1.99
FANCA-221ENST00000566889 ERVV-2B6SEH9 535 aa27.46■■□□□ 1.99
FANCA-221ENST00000566889 NKRFO15226 690 aaKnown RBP eCLIP27.46■■□□□ 1.99
FANCA-221ENST00000566889 GCKP35557 465 aa27.46■■□□□ 1.99
FANCA-221ENST00000566889 KRT28Q7Z3Y7 464 aa27.46■■□□□ 1.99
FANCA-221ENST00000566889 ACTRT1Q8TDG2 376 aa27.46■■□□□ 1.99
FANCA-221ENST00000566889 ZNF483Q8TF39 744 aaPredicted RBP27.46■■□□□ 1.99
FANCA-221ENST00000566889 STAMBPL1Q96FJ0 436 aa27.46■■□□□ 1.99
FANCA-221ENST00000566889 SPAG5Q96R06 1193 aa27.46■■□□□ 1.99
FANCA-221ENST00000566889 PLIN2Q99541 437 aa27.46■■□□□ 1.99
FANCA-221ENST00000566889 SPATS2LQ9NUQ6 558 aaKnown RBP27.46■■□□□ 1.99
FANCA-221ENST00000566889 PCDHA4Q9UN74 947 aa27.46■■□□□ 1.99
FANCA-221ENST00000566889 FCER1AP12319 257 aa27.45■■□□□ 1.99
FANCA-221ENST00000566889 KLRC1P26715 233 aa27.45■■□□□ 1.99
FANCA-221ENST00000566889 DNA2P51530 1060 aa27.45■■□□□ 1.99
FANCA-221ENST00000566889 MYO1EQ12965 1108 aa27.45■■□□□ 1.99
FANCA-221ENST00000566889 SFMBT2Q5VUG0 894 aa27.45■■□□□ 1.99
FANCA-221ENST00000566889 TLCD1Q96CP7 247 aa27.45■■□□□ 1.99
FANCA-221ENST00000566889 CEP72Q9P209 647 aa27.45■■□□□ 1.99
FANCA-221ENST00000566889 BTNL10A8MVZ5 291 aa27.45■■□□□ 1.98
FANCA-221ENST00000566889 PLCG1P19174 1290 aa27.45■■□□□ 1.98
FANCA-221ENST00000566889 HOXA7P31268 230 aaPredicted RBP27.45■■□□□ 1.98
FANCA-221ENST00000566889 RPS6KA1Q15418 735 aa27.45■■□□□ 1.98
FANCA-221ENST00000566889 TMC4Q7Z404 712 aa27.45■■□□□ 1.98
FANCA-221ENST00000566889 MIGA1Q8NAN2 632 aa27.45■■□□□ 1.98
FANCA-221ENST00000566889 HOMER3Q9NSC5 361 aa27.45■■□□□ 1.98
FANCA-221ENST00000566889 TCP11L1Q9NUJ3 509 aa27.45■■□□□ 1.98
FANCA-221ENST00000566889 TRPC6Q9Y210 931 aa27.45■■□□□ 1.98
FANCA-221ENST00000566889 CCDC188H7C350 402 aa27.44■■□□□ 1.98
FANCA-221ENST00000566889 ZPR1O75312 459 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms