RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 RHOBTB3O94955 611 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 GYPCP04921 128 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 CASP14P31944 242 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 CCT6AP40227 531 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 COPB1P53618 953 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 KCNJ12Q14500 433 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 MTF1Q14872 753 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 ELF2Q15723 593 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 USP50Q70EL3 339 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 FAM160B2Q86V87 743 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 IRF2BP1Q8IU81 584 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 LRRN4CLQ8ND94 238 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 LPAR1Q92633 364 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 ATG4CQ96DT6 458 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 CDCA5Q96FF9 252 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 CUEDC2Q9H467 287 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 ELP3Q9H9T3 547 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 CCPG1Q9ULG6 757 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 SOWAHDA6NJG2 315 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 SPDYE3A6NKU9 549 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 TRAF5O00463 557 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 ALAS1P13196 640 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 MAP3K9P80192 1104 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 CALCRLQ16602 461 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 CABP7Q86V35 215 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 GIMAP8Q8ND71 665 aaPredicted RBP12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 DESI2Q9BSY9 194 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 VPS16Q9H269 839 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 AS3MTQ9HBK9 375 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 DDX25Q9UHL0 483 aaKnown RBP12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 PCNTO95613 3336 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 POTEMA6NI47 508 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 NFIBO00712 420 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 PLCG1P19174 1290 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 FECHP22830 423 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 FXR1P51114 621 aaKnown RBP eCLIP12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 ORC2Q13416 577 aaPredicted RBP12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 RAD9BQ6WBX8 426 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 CNGA4Q8IV77 575 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 ZNF526Q8TF50 670 aaPredicted RBP12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 CCDC51Q96ER9 411 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 WDR24Q96S15 920 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 WDR18Q9BV38 432 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 MAGEF1Q9HAY2 307 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 AFG3L2Q9Y4W6 797 aa12.08□□□□□ -0.48
PDXDC1-214ENST00000566633 URI1O94763 535 aaPredicted RBP12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 CCDC175P0C221 793 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 PMS1P54277 932 aaKnown RBP12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 GNG11P61952 73 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 ARHGAP4P98171 946 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 ERCC6LQ2NKX8 1250 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 ANKRD20A12PQ8NF67 263 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 ZNF397Q8NF99 534 aaPredicted RBP12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 OTUD5Q96G74 571 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 PURBQ96QR8 312 aaKnown RBP12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 SRRTQ9BXP5 876 aaKnown RBP12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 TAB2Q9NYJ8 693 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 RIPK3Q9Y572 518 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 ADGRG1Q9Y653 693 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 TRIM49BA6NDI0 452 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 IRF6O14896 467 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 MARCH6O60337 910 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 USP14P54578 494 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 PRR16Q569H4 304 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 MUM1L1Q5H9M0 696 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 HAS1Q92839 578 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 MTMR9Q96QG7 549 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 MMTAG2Q9BU76 263 aaKnown RBP12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 MRPL44Q9H9J2 332 aaKnown RBP12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 PPP1R9AQ9ULJ8 1098 aa12.07□□□□□ -0.48
PDXDC1-214ENST00000566633 SPDYE4A6NLX3 237 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 FAM86B1E9PN63 330 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 RNF225M0QZC1 329 aaPredicted RBP12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 FAM86B2P0C5J1 330 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 CASQ1P31415 396 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 CBX1P83916 185 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 TREML2Q5T2D2 321 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 C7orf25Q9BPX7 421 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 NUDT12Q9BQG2 462 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 TRIM9Q9C026 710 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 RRAGCQ9HB90 399 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 SLC38A10Q9HBR0 1119 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 CSADQ9Y600 493 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 GCOM1H8Y6P7 765 aaPredicted RBP12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 PLA2G6O60733 806 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 ICAM1P05362 532 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 POLR2MP0CAP2 368 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 STIM1Q13586 685 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 FBXO38Q6PIJ6 1188 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 CREBRFQ8IUR6 639 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 DHTKD1Q96HY7 919 aaPredicted RBP12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 GINM1Q9NU53 330 aa12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 CTDP1Q9Y5B0 961 aaPredicted RBP12.06□□□□□ -0.48
PDXDC1-214ENST00000566633 VWA5AO00534 786 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 PSMA7O14818 248 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 TPM1P09493 284 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 PPP4R3AQ6IN85 833 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 TTI2Q6NXR4 508 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 THAP9Q9H5L6 903 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 TMOD4Q9NZQ9 345 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms