RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 PDE6AP16499 860 aa6.7□□□□□ -1.34
CNOT1-209ENST00000566240 YBX3P16989 372 aaKnown RBP eCLIP6.7□□□□□ -1.343e-8■□□□□ 8.6
CNOT1-209ENST00000566240 FSTP19883 344 aa6.7□□□□□ -1.34
CNOT1-209ENST00000566240 PIN1Q13526 163 aaPredicted RBP6.7□□□□□ -1.34
CNOT1-209ENST00000566240 OSTM1Q86WC4 334 aa6.7□□□□□ -1.34
CNOT1-209ENST00000566240 RELTQ969Z4 430 aa6.7□□□□□ -1.34
CNOT1-209ENST00000566240 CDH19Q9H159 772 aa6.7□□□□□ -1.34
CNOT1-209ENST00000566240 VTA1Q9NP79 307 aa6.7□□□□□ -1.34
CNOT1-209ENST00000566240 ADGRE2Q9UHX3 823 aa6.7□□□□□ -1.34
CNOT1-209ENST00000566240 KIF3BO15066 747 aa6.69□□□□□ -1.34
CNOT1-209ENST00000566240 CEBPAP49715 358 aaPredicted RBP6.69□□□□□ -1.34
CNOT1-209ENST00000566240 SESN3P58005 492 aa6.69□□□□□ -1.34
CNOT1-209ENST00000566240 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
CNOT1-209ENST00000566240 CREB3L3Q68CJ9 461 aa6.69□□□□□ -1.34
CNOT1-209ENST00000566240 HDGFL2Q7Z4V5 671 aaPredicted RBP6.69□□□□□ -1.34
CNOT1-209ENST00000566240 NLRP10Q86W26 655 aa6.69□□□□□ -1.34
CNOT1-209ENST00000566240 CBARPQ8N350 705 aaPredicted RBP6.69□□□□□ -1.34
CNOT1-209ENST00000566240 EFHBQ8N7U6 833 aa6.69□□□□□ -1.34
CNOT1-209ENST00000566240 TRMT2BQ96GJ1 504 aaKnown RBP6.69□□□□□ -1.34
CNOT1-209ENST00000566240 SCYL1Q96KG9 808 aa6.69□□□□□ -1.34
CNOT1-209ENST00000566240 POLR3GLQ9BT43 218 aa6.69□□□□□ -1.34
CNOT1-209ENST00000566240 BOCQ9BWV1 1114 aa6.69□□□□□ -1.34
CNOT1-209ENST00000566240 H2AFY2Q9P0M6 372 aaPredicted RBP6.69□□□□□ -1.34
CNOT1-209ENST00000566240 TNFRSF10DQ9UBN6 386 aa6.69□□□□□ -1.34
CNOT1-209ENST00000566240 ZC3H7BQ9UGR2 993 aaKnown RBP6.69□□□□□ -1.34
CNOT1-209ENST00000566240 SLC12A8A0AV02 714 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 ZNF561-AS1K7EIQ3 104 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 PPP1R11O60927 126 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-209ENST00000566240 H2AFB1P0C5Y9 115 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 H2AFB2P0C5Z0 115 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 GNAT1P11488 350 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 KRT15P19012 456 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 JAM2P57087 298 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 ERVK-21P61565 698 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 SPIRE1Q08AE8 756 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 GPR19Q15760 415 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 DDB1Q16531 1140 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 PTPN21Q16825 1174 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 ABCB5Q2M3G0 1257 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 NBPF11Q86T75 865 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 CCDC146Q8IYE0 955 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 MYO1HQ8N1T3 1032 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 CLRN3Q8NCR9 226 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 ASB11Q8WXH4 323 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 SLC5A5Q92911 643 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 SYTL4Q96C24 671 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-209ENST00000566240 AHCYL2Q96HN2 611 aaKnown RBP6.68□□□□□ -1.34
CNOT1-209ENST00000566240 HRASLS5Q96KN8 279 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 CAMKK2Q96RR4 588 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 RTFDC1Q9BY42 306 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-209ENST00000566240 SMURF1Q9HCE7 757 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 MARCH2Q9P0N8 246 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 PIM2Q9P1W9 311 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 GULP1Q9UBP9 304 aa6.68□□□□□ -1.34
CNOT1-209ENST00000566240 FADS2P1A8MWK0 482 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 H7C1D1 291 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 TGM5O43548 720 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 KRT37O76014 449 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 AMY2AP04746 511 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 ZBTB48P10074 688 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-209ENST00000566240 MYBL2P10244 700 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 COL6A2P12110 1019 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 FOSL1P15407 271 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 AMY2BP19961 511 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 FPR2P25090 351 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 GRIK1P39086 918 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 RBM10P98175 930 aaKnown RBP6.67□□□□□ -1.34
CNOT1-209ENST00000566240 LRP8Q14114 963 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 AOC3Q16853 763 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 INAVAQ3KP66 663 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 BROXQ5VW32 411 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 ARHGAP36Q6ZRI8 547 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 ZDHHC13Q8IUH4 622 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 TEX2Q8IWB9 1127 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 CCAR1Q8IX12 1150 aaKnown RBP6.67□□□□□ -1.34
CNOT1-209ENST00000566240 Q8N1Y9 231 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 FUBP3Q96I24 572 aaKnown RBP eCLIP6.67□□□□□ -1.34
CNOT1-209ENST00000566240 ZNF180Q9UJW8 692 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 X6R8D5 127 aa6.67□□□□□ -1.34
CNOT1-209ENST00000566240 TCRBV5S4A2TA0A5A2 114 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 C22orf46C9J442 243 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 ABLIM3O94929 683 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 FUCA1P04066 466 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 ZSCAN20P17040 1043 aaPredicted RBP6.66□□□□□ -1.34
CNOT1-209ENST00000566240 CCND1P24385 295 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 KLF1Q13351 362 aaPredicted RBP6.66□□□□□ -1.34
CNOT1-209ENST00000566240 ZNF174Q15697 407 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 RGL3Q3MIN7 710 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 HABP4Q5JVS0 413 aaKnown RBP6.66□□□□□ -1.34
CNOT1-209ENST00000566240 HHIPL2Q6UWX4 724 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 OTOP3Q7RTS5 596 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 C14orf80Q86SX3 495 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 SLC51AQ86UW1 340 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 NLGN2Q8NFZ4 835 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 MAP6Q96JE9 813 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 HHIPL1Q96JK4 782 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 JMJD8Q96S16 334 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 G6PC3Q9BUM1 346 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 EPB41L1Q9H4G0 881 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms